RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 NUTM2FA1L443 756 aa22.62■■□□□ 1.21
CAPN1-213ENST00000527897 ORAI2Q96SN7 254 aa22.62■■□□□ 1.21
CAPN1-213ENST00000527897 SAFB2Q14151 953 aaKnown RBP eCLIP22.61■■□□□ 1.21
CAPN1-213ENST00000527897 CDC42BPGQ6DT37 1551 aa22.59■■□□□ 1.21
CAPN1-213ENST00000527897 MEX3CQ5U5Q3 659 aaKnown RBP22.58■■□□□ 1.21
CAPN1-213ENST00000527897 SHPRHQ149N8 1683 aa22.58■■□□□ 1.2
CAPN1-213ENST00000527897 NUTM2BA6NNL0 878 aaPredicted RBP22.57■■□□□ 1.2
CAPN1-213ENST00000527897 NUTM2EB1AL46 878 aaPredicted RBP22.57■■□□□ 1.2
CAPN1-213ENST00000527897 SOCS7O14512 581 aa22.57■■□□□ 1.2
CAPN1-213ENST00000527897 ESCO1Q5FWF5 840 aa22.57■■□□□ 1.2
CAPN1-213ENST00000527897 NUTM2AQ8IVF1 878 aaPredicted RBP22.57■■□□□ 1.2
CAPN1-213ENST00000527897 PRAM1Q96QH2 718 aa22.57■■□□□ 1.2
CAPN1-213ENST00000527897 POGKQ9P215 609 aa22.57■■□□□ 1.2
CAPN1-213ENST00000527897 SPATA31A6Q5VVP1 1343 aa22.57■■□□□ 1.2
CAPN1-213ENST00000527897 RGS17Q9UGC6 210 aaPredicted RBP22.56■■□□□ 1.2
CAPN1-213ENST00000527897 TRAK1Q9UPV9 953 aa22.56■■□□□ 1.2
CAPN1-213ENST00000527897 LRRC59Q96AG4 307 aaKnown RBP22.55■■□□□ 1.2
CAPN1-213ENST00000527897 STAC3Q96MF2 364 aa22.54■■□□□ 1.2
CAPN1-213ENST00000527897 LRP6O75581 1613 aa22.53■■□□□ 1.2
CAPN1-213ENST00000527897 SIRT1Q96EB6 747 aa22.53■■□□□ 1.2
CAPN1-213ENST00000527897 ADGRB1O14514 1584 aa22.53■■□□□ 1.2
CAPN1-213ENST00000527897 FMN2Q9NZ56 1722 aa22.51■■□□□ 1.19
CAPN1-213ENST00000527897 DLC1Q96QB1 1528 aa22.49■■□□□ 1.19
CAPN1-213ENST00000527897 FOXO3O43524 673 aa22.49■■□□□ 1.19
CAPN1-213ENST00000527897 XPCQ01831 940 aaPredicted RBP22.49■■□□□ 1.19
CAPN1-213ENST00000527897 NEUROD1Q13562 356 aa22.49■■□□□ 1.19
CAPN1-213ENST00000527897 POTEAQ6S8J7 498 aa22.48■■□□□ 1.19
CAPN1-213ENST00000527897 SIN3AQ96ST3 1273 aa22.48■■□□□ 1.19
CAPN1-213ENST00000527897 HIRIP3Q9BW71 556 aaPredicted RBP22.48■■□□□ 1.19
CAPN1-213ENST00000527897 NPHP3Q7Z494 1330 aa22.48■■□□□ 1.19
CAPN1-213ENST00000527897 PNPLA6Q8IY17 1366 aa22.48■■□□□ 1.19
CAPN1-213ENST00000527897 SOS2Q07890 1332 aaPredicted RBP22.47■■□□□ 1.19
CAPN1-213ENST00000527897 MINK1Q8N4C8 1332 aaPredicted RBP22.47■■□□□ 1.19
CAPN1-213ENST00000527897 RGPD8O14715 1765 aaPredicted RBP22.47■■□□□ 1.19
CAPN1-213ENST00000527897 TRIM26Q12899 539 aaPredicted RBP22.46■■□□□ 1.19
CAPN1-213ENST00000527897 ARHGEF28Q8N1W1 1705 aaKnown RBP22.41■■□□□ 1.18
CAPN1-213ENST00000527897 ADAMTS2O95450 1211 aa22.41■■□□□ 1.18
CAPN1-213ENST00000527897 L3MBTL2Q969R5 705 aa22.41■■□□□ 1.18
CAPN1-213ENST00000527897 C8orf37Q96NL8 207 aa22.41■■□□□ 1.18
CAPN1-213ENST00000527897 KIF1AQ12756 1690 aa22.41■■□□□ 1.18
CAPN1-213ENST00000527897 PXDNQ92626 1479 aa22.41■■□□□ 1.18
CAPN1-213ENST00000527897 NBPF1Q3BBV0 1214 aa22.4■■□□□ 1.18
CAPN1-213ENST00000527897 PHF8Q9UPP1 1060 aa22.4■■□□□ 1.18
CAPN1-213ENST00000527897 KIAA1210Q9ULL0 1709 aa22.4■■□□□ 1.18
CAPN1-213ENST00000527897 ADGRB2O60241 1585 aa22.38■■□□□ 1.17
CAPN1-213ENST00000527897 ZNF772Q68DY9 489 aaPredicted RBP22.38■■□□□ 1.17
CAPN1-213ENST00000527897 PMFBP1Q8TBY8 1022 aa22.38■■□□□ 1.17
CAPN1-213ENST00000527897 AFF2P51816 1311 aa22.37■■□□□ 1.17
CAPN1-213ENST00000527897 KRT28Q7Z3Y7 464 aa22.37■■□□□ 1.17
CAPN1-213ENST00000527897 USP32Q8NFA0 1604 aa22.35■■□□□ 1.17
CAPN1-213ENST00000527897 WASLO00401 505 aaPredicted RBP22.35■■□□□ 1.17
CAPN1-213ENST00000527897 PLEKHG5O94827 1062 aa22.35■■□□□ 1.17
CAPN1-213ENST00000527897 ANKARQ7Z5J8 1434 aa22.34■■□□□ 1.17
CAPN1-213ENST00000527897 PSME1Q06323 249 aa22.34■■□□□ 1.17
CAPN1-213ENST00000527897 NGLY1Q96IV0 654 aa22.34■■□□□ 1.17
CAPN1-213ENST00000527897 COL22A1Q8NFW1 1626 aaPredicted RBP22.33■■□□□ 1.17
CAPN1-213ENST00000527897 LMOD2Q6P5Q4 547 aa22.33■■□□□ 1.17
CAPN1-213ENST00000527897 EIF3AQ14152 1382 aaKnown RBP22.33■■□□□ 1.17
CAPN1-213ENST00000527897 TULP4Q9NRJ4 1543 aa22.31■■□□□ 1.16
CAPN1-213ENST00000527897 SPATA31A3Q5VYP0 1347 aa22.31■■□□□ 1.16
CAPN1-213ENST00000527897 PRR36Q9H6K5 1346 aa22.31■■□□□ 1.16
CAPN1-213ENST00000527897 HAP1P54257 671 aaPredicted RBP22.28■■□□□ 1.16
CAPN1-213ENST00000527897 CDK19Q9BWU1 502 aa22.28■■□□□ 1.16
CAPN1-213ENST00000527897 RXRBP28702 533 aa22.27■■□□□ 1.16
CAPN1-213ENST00000527897 TNS3Q68CZ2 1445 aa22.27■■□□□ 1.16
CAPN1-213ENST00000527897 TRPM1Q7Z4N2 1603 aa22.27■■□□□ 1.16
CAPN1-213ENST00000527897 NGDNQ8NEJ9 315 aaKnown RBP22.26■■□□□ 1.15
CAPN1-213ENST00000527897 NUDT16Q96DE0 195 aaKnown RBP22.26■■□□□ 1.15
CAPN1-213ENST00000527897 QTRT2Q9H974 415 aaKnown RBP22.26■■□□□ 1.15
CAPN1-213ENST00000527897 CENPJQ9HC77 1338 aaPredicted RBP22.26■■□□□ 1.15
CAPN1-213ENST00000527897 GPRASP1Q5JY77 1395 aa22.25■■□□□ 1.15
CAPN1-213ENST00000527897 ITSN1Q15811 1721 aa22.25■■□□□ 1.15
CAPN1-213ENST00000527897 ROCK2O75116 1388 aaKnown RBP22.25■■□□□ 1.15
CAPN1-213ENST00000527897 TONSLQ96HA7 1378 aa22.25■■□□□ 1.15
CAPN1-213ENST00000527897 USP21Q9UK80 565 aa22.24■■□□□ 1.15
CAPN1-213ENST00000527897 QRICH2Q9H0J4 1663 aa22.23■■□□□ 1.15
CAPN1-213ENST00000527897 MARF1Q9Y4F3 1742 aaKnown RBP22.23■■□□□ 1.15
CAPN1-213ENST00000527897 ATP7BP35670 1465 aa22.23■■□□□ 1.15
CAPN1-213ENST00000527897 CABLES1Q8TDN4 633 aa22.23■■□□□ 1.15
CAPN1-213ENST00000527897 SBNO1A3KN83 1393 aa22.23■■□□□ 1.15
CAPN1-213ENST00000527897 PAK3O75914 559 aaPredicted RBP22.22■■□□□ 1.15
CAPN1-213ENST00000527897 SRPK2P78362 688 aaKnown RBP22.22■■□□□ 1.15
CAPN1-213ENST00000527897 ARHGEF10O15013 1369 aa22.21■■□□□ 1.15
CAPN1-213ENST00000527897 NBPF8Q3BBV2 869 aa22.2■■□□□ 1.14
CAPN1-213ENST00000527897 TRPM3Q9HCF6 1732 aaPredicted RBP22.19■■□□□ 1.14
CAPN1-213ENST00000527897 RBM6P78332 1123 aaKnown RBP22.18■■□□□ 1.14
CAPN1-213ENST00000527897 FNBP4Q8N3X1 1017 aaPredicted RBP22.18■■□□□ 1.14
CAPN1-213ENST00000527897 CABP2Q9NPB3 220 aa22.18■■□□□ 1.14
CAPN1-213ENST00000527897 TRPC5Q9UL62 973 aaPredicted RBP22.17■■□□□ 1.14
CAPN1-213ENST00000527897 CCDC61Q9Y6R9 512 aa22.16■■□□□ 1.14
CAPN1-213ENST00000527897 TOPAZ1Q8N9V7 1692 aa22.16■■□□□ 1.14
CAPN1-213ENST00000527897 ABCA3Q99758 1704 aa22.15■■□□□ 1.14
CAPN1-213ENST00000527897 ALS2Q96Q42 1657 aa22.14■■□□□ 1.14
CAPN1-213ENST00000527897 ACEP12821 1306 aa22.14■■□□□ 1.14
CAPN1-213ENST00000527897 CARD11Q9BXL7 1154 aa22.13■■□□□ 1.13
CAPN1-213ENST00000527897 PCGF6Q9BYE7 350 aa22.12■■□□□ 1.13
CAPN1-213ENST00000527897 PPIP5K1Q6PFW1 1433 aa22.12■■□□□ 1.13
CAPN1-213ENST00000527897 BCL9LQ86UU0 1499 aa22.11■■□□□ 1.13
CAPN1-213ENST00000527897 CDK12Q9NYV4 1490 aaPredicted RBP22.11■■□□□ 1.13
CAPN1-213ENST00000527897 RGS12O14924 1447 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms