RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 KDM2AQ9Y2K7 1162 aa28.23■■■□□ 2.11
CAPN1-211ENST00000527739 PIK3C2GO75747 1445 aa28.22■■■□□ 2.11
CAPN1-211ENST00000527739 ORAI2Q96SN7 254 aa28.22■■■□□ 2.11
CAPN1-211ENST00000527739 C14orf93Q9H972 538 aaKnown RBP28.22■■■□□ 2.11
CAPN1-211ENST00000527739 LRPPRCP42704 1394 aaKnown RBP28.22■■■□□ 2.11
CAPN1-211ENST00000527739 C8orf37Q96NL8 207 aa28.21■■■□□ 2.11
CAPN1-211ENST00000527739 PRAG1Q86YV5 1406 aa28.18■■■□□ 2.1
CAPN1-211ENST00000527739 DCAF11Q8TEB1 546 aa28.18■■■□□ 2.1
CAPN1-211ENST00000527739 ABCC11Q96J66 1382 aa28.18■■■□□ 2.1
CAPN1-211ENST00000527739 CDK12Q9NYV4 1490 aaPredicted RBP28.18■■■□□ 2.1
CAPN1-211ENST00000527739 LAMC1P11047 1609 aa28.18■■■□□ 2.1
CAPN1-211ENST00000527739 NUTM2FA1L443 756 aa28.17■■■□□ 2.1
CAPN1-211ENST00000527739 DHX57Q6P158 1386 aaKnown RBP28.16■■■□□ 2.1
CAPN1-211ENST00000527739 ESCO1Q5FWF5 840 aa28.16■■■□□ 2.1
CAPN1-211ENST00000527739 YTHDC2Q9H6S0 1430 aaKnown RBP28.16■■■□□ 2.1
CAPN1-211ENST00000527739 IFT172Q9UG01 1749 aa28.15■■■□□ 2.1
CAPN1-211ENST00000527739 PLEKHH1Q9ULM0 1364 aa28.14■■■□□ 2.1
CAPN1-211ENST00000527739 ADAMTS2O95450 1211 aa28.14■■■□□ 2.1
CAPN1-211ENST00000527739 QTRT2Q9H974 415 aaKnown RBP28.14■■■□□ 2.1
CAPN1-211ENST00000527739 SOS2Q07890 1332 aaPredicted RBP28.14■■■□□ 2.09
CAPN1-211ENST00000527739 RGS12O14924 1447 aa28.13■■■□□ 2.09
CAPN1-211ENST00000527739 TECPR2O15040 1411 aa28.12■■■□□ 2.09
CAPN1-211ENST00000527739 MYOM2P54296 1465 aa28.12■■■□□ 2.09
CAPN1-211ENST00000527739 SAFB2Q14151 953 aaKnown RBP eCLIP28.11■■■□□ 2.09
CAPN1-211ENST00000527739 NRXN1Q9ULB1 1477 aa28.09■■■□□ 2.09
CAPN1-211ENST00000527739 RBM6P78332 1123 aaKnown RBP28.09■■■□□ 2.09
CAPN1-211ENST00000527739 NGLY1Q96IV0 654 aa28.09■■■□□ 2.09
CAPN1-211ENST00000527739 SIRT1Q96EB6 747 aa28.08■■■□□ 2.09
CAPN1-211ENST00000527739 PRAM1Q96QH2 718 aa28.08■■■□□ 2.09
CAPN1-211ENST00000527739 POGKQ9P215 609 aa28.08■■■□□ 2.09
CAPN1-211ENST00000527739 TRAK1Q9UPV9 953 aa28.05■■■□□ 2.08
CAPN1-211ENST00000527739 FOXO3O43524 673 aa28.04■■■□□ 2.08
CAPN1-211ENST00000527739 STAC3Q96MF2 364 aa28.04■■■□□ 2.08
CAPN1-211ENST00000527739 CDC42BPGQ6DT37 1551 aa28.03■■■□□ 2.08
CAPN1-211ENST00000527739 XPCQ01831 940 aaPredicted RBP28.03■■■□□ 2.08
CAPN1-211ENST00000527739 NPHP3Q7Z494 1330 aa28.02■■■□□ 2.08
CAPN1-211ENST00000527739 COL22A1Q8NFW1 1626 aaPredicted RBP28.01■■■□□ 2.07
CAPN1-211ENST00000527739 USP21Q9UK80 565 aa28■■■□□ 2.07
CAPN1-211ENST00000527739 PXDNQ92626 1479 aa28■■■□□ 2.07
CAPN1-211ENST00000527739 KNDC1Q76NI1 1749 aa27.97■■■□□ 2.07
CAPN1-211ENST00000527739 FNBP4Q8N3X1 1017 aaPredicted RBP27.96■■■□□ 2.07
CAPN1-211ENST00000527739 HIRIP3Q9BW71 556 aaPredicted RBP27.95■■■□□ 2.06
CAPN1-211ENST00000527739 MINK1Q8N4C8 1332 aaPredicted RBP27.93■■■□□ 2.06
CAPN1-211ENST00000527739 TRPC5Q9UL62 973 aaPredicted RBP27.93■■■□□ 2.06
CAPN1-211ENST00000527739 ATRNO75882 1429 aa27.92■■■□□ 2.06
CAPN1-211ENST00000527739 PHF8Q9UPP1 1060 aa27.92■■■□□ 2.06
CAPN1-211ENST00000527739 KRT28Q7Z3Y7 464 aa27.9■■■□□ 2.06
CAPN1-211ENST00000527739 ADGRB1O14514 1584 aa27.9■■■□□ 2.06
CAPN1-211ENST00000527739 BCL9LQ86UU0 1499 aa27.89■■■□□ 2.05
CAPN1-211ENST00000527739 DLC1Q96QB1 1528 aa27.88■■■□□ 2.05
CAPN1-211ENST00000527739 FMN2Q9NZ56 1722 aa27.88■■■□□ 2.05
CAPN1-211ENST00000527739 MARF1Q9Y4F3 1742 aaKnown RBP27.87■■■□□ 2.05
CAPN1-211ENST00000527739 PSME1Q06323 249 aa27.86■■■□□ 2.05
CAPN1-211ENST00000527739 PMFBP1Q8TBY8 1022 aa27.86■■■□□ 2.05
CAPN1-211ENST00000527739 ATAD2Q6PL18 1390 aa27.86■■■□□ 2.05
CAPN1-211ENST00000527739 PLEKHG5O94827 1062 aa27.85■■■□□ 2.05
CAPN1-211ENST00000527739 NEUROD1Q13562 356 aa27.85■■■□□ 2.05
CAPN1-211ENST00000527739 LMOD2Q6P5Q4 547 aa27.84■■■□□ 2.05
CAPN1-211ENST00000527739 SIN3AQ96ST3 1273 aa27.84■■■□□ 2.05
CAPN1-211ENST00000527739 SPATA31A3Q5VYP0 1347 aa27.82■■■□□ 2.04
CAPN1-211ENST00000527739 WASLO00401 505 aaPredicted RBP27.81■■■□□ 2.04
CAPN1-211ENST00000527739 HAP1P54257 671 aaPredicted RBP27.8■■■□□ 2.04
CAPN1-211ENST00000527739 NBPF1Q3BBV0 1214 aa27.8■■■□□ 2.04
CAPN1-211ENST00000527739 KIF1AQ12756 1690 aa27.79■■■□□ 2.04
CAPN1-211ENST00000527739 L3MBTL2Q969R5 705 aa27.79■■■□□ 2.04
CAPN1-211ENST00000527739 RGPD8O14715 1765 aaPredicted RBP27.78■■■□□ 2.04
CAPN1-211ENST00000527739 GJD4Q96KN9 370 aaPredicted RBP27.77■■■□□ 2.04
CAPN1-211ENST00000527739 ANKARQ7Z5J8 1434 aa27.76■■■□□ 2.04
CAPN1-211ENST00000527739 EIF3AQ14152 1382 aaKnown RBP27.76■■■□□ 2.03
CAPN1-211ENST00000527739 SLIT2O94813 1529 aa27.75■■■□□ 2.03
CAPN1-211ENST00000527739 EP400Q96L91 3159 aa27.74■■■□□ 2.03
CAPN1-211ENST00000527739 PRR36Q9H6K5 1346 aa27.74■■■□□ 2.03
CAPN1-211ENST00000527739 NGDNQ8NEJ9 315 aaKnown RBP27.74■■■□□ 2.03
CAPN1-211ENST00000527739 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.74■■■□□ 2.03
CAPN1-211ENST00000527739 GLI3P10071 1580 aa27.73■■■□□ 2.03
CAPN1-211ENST00000527739 USP32Q8NFA0 1604 aa27.72■■■□□ 2.03
CAPN1-211ENST00000527739 UNC5CLQ8IV45 518 aa27.72■■■□□ 2.03
CAPN1-211ENST00000527739 CABLES1Q8TDN4 633 aa27.72■■■□□ 2.03
CAPN1-211ENST00000527739 CDK19Q9BWU1 502 aa27.72■■■□□ 2.03
CAPN1-211ENST00000527739 GPRASP1Q5JY77 1395 aa27.72■■■□□ 2.03
CAPN1-211ENST00000527739 RALGAPBQ86X10 1494 aa27.71■■■□□ 2.03
CAPN1-211ENST00000527739 ADGRB2O60241 1585 aa27.7■■■□□ 2.03
CAPN1-211ENST00000527739 TNS3Q68CZ2 1445 aa27.7■■■□□ 2.03
CAPN1-211ENST00000527739 NUDT16Q96DE0 195 aaKnown RBP27.7■■■□□ 2.02
CAPN1-211ENST00000527739 SBNO1A3KN83 1393 aa27.69■■■□□ 2.02
CAPN1-211ENST00000527739 PAK3O75914 559 aaPredicted RBP27.68■■■□□ 2.02
CAPN1-211ENST00000527739 SRCAPQ6ZRS2 3230 aa27.67■■■□□ 2.02
CAPN1-211ENST00000527739 TRIM26Q12899 539 aaPredicted RBP27.67■■■□□ 2.02
CAPN1-211ENST00000527739 TULP4Q9NRJ4 1543 aa27.67■■■□□ 2.02
CAPN1-211ENST00000527739 ARHGEF10O15013 1369 aa27.66■■■□□ 2.02
CAPN1-211ENST00000527739 CENPJQ9HC77 1338 aaPredicted RBP27.64■■■□□ 2.01
CAPN1-211ENST00000527739 ABCA3Q99758 1704 aa27.64■■■□□ 2.01
CAPN1-211ENST00000527739 BRWD3Q6RI45 1802 aa27.62■■■□□ 2.01
CAPN1-211ENST00000527739 ARHGEF28Q8N1W1 1705 aaKnown RBP27.62■■■□□ 2.01
CAPN1-211ENST00000527739 SRPK2P78362 688 aaKnown RBP27.62■■■□□ 2.01
CAPN1-211ENST00000527739 PLCH1Q4KWH8 1693 aa27.62■■■□□ 2.01
CAPN1-211ENST00000527739 KIAA1210Q9ULL0 1709 aa27.61■■■□□ 2.01
CAPN1-211ENST00000527739 CCDC125Q86Z20 511 aa27.6■■■□□ 2.01
CAPN1-211ENST00000527739 ZRANB1Q9UGI0 708 aa27.6■■■□□ 2.01
CAPN1-211ENST00000527739 CCDC61Q9Y6R9 512 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms