RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.84□□□□□ -0.99
CTNND1-216ENST00000527467 GIMAP7Q8NHV1 300 aa8.83□□□□□ -1
CTNND1-216ENST00000527467 PCMTD1Q96MG8 357 aaPredicted RBP8.83□□□□□ -1
CTNND1-216ENST00000527467 PRKCSHP14314 528 aaPredicted RBP8.83□□□□□ -1
CTNND1-216ENST00000527467 CAGE1Q8TC20 777 aa8.83□□□□□ -1
CTNND1-216ENST00000527467 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.83□□□□□ -11e-6■■■■■ 38.5
CTNND1-216ENST00000527467 MYO6Q9UM54 1294 aa8.83□□□□□ -1
CTNND1-216ENST00000527467 U2SURPO15042 1029 aaKnown RBP8.82□□□□□ -1
CTNND1-216ENST00000527467 STAC3Q96MF2 364 aa8.82□□□□□ -1
CTNND1-216ENST00000527467 APBB1O00213 710 aa8.82□□□□□ -1
CTNND1-216ENST00000527467 LRRC59Q96AG4 307 aaKnown RBP8.82□□□□□ -1
CTNND1-216ENST00000527467 ZFYVE16Q7Z3T8 1539 aa8.82□□□□□ -1
CTNND1-216ENST00000527467 BAG6P46379 1132 aa8.81□□□□□ -1
CTNND1-216ENST00000527467 NCOA2Q15596 1464 aa8.81□□□□□ -1
CTNND1-216ENST00000527467 CCDC47Q96A33 483 aaKnown RBP8.81□□□□□ -1
CTNND1-216ENST00000527467 FOXD4L1Q9NU39 408 aa8.81□□□□□ -1
CTNND1-216ENST00000527467 BCCIPQ9P287 314 aaKnown RBP eCLIP8.81□□□□□ -11e-6■■■■□ 21.2
CTNND1-216ENST00000527467 GPATCH3Q96I76 525 aa8.81□□□□□ -1
CTNND1-216ENST00000527467 IFT57Q9NWB7 429 aa8.81□□□□□ -1
CTNND1-216ENST00000527467 H3BQV1 296 aa8.8□□□□□ -1
CTNND1-216ENST00000527467 IFFO2Q5TF58 517 aa8.8□□□□□ -1
CTNND1-216ENST00000527467 R3HCC1Q9Y3T6 440 aaKnown RBP8.8□□□□□ -1
CTNND1-216ENST00000527467 SETD5Q9C0A6 1442 aa8.8□□□□□ -1
CTNND1-216ENST00000527467 ESCO1Q5FWF5 840 aa8.8□□□□□ -1
CTNND1-216ENST00000527467 AXDND1Q5T1B0 1012 aaPredicted RBP8.8□□□□□ -1
CTNND1-216ENST00000527467 CLASRPQ8N2M8 674 aaKnown RBP8.8□□□□□ -1
CTNND1-216ENST00000527467 PMFBP1Q8TBY8 1022 aa8.8□□□□□ -1
CTNND1-216ENST00000527467 RXRBP28702 533 aa8.79□□□□□ -1
CTNND1-216ENST00000527467 CT47A1Q5JQC4 288 aaPredicted RBP8.79□□□□□ -1
CTNND1-216ENST00000527467 VPS53Q5VIR6 699 aa8.79□□□□□ -1
CTNND1-216ENST00000527467 FYCO1Q9BQS8 1478 aa8.79□□□□□ -1
CTNND1-216ENST00000527467 PLCH2O75038 1416 aa8.79□□□□□ -1
CTNND1-216ENST00000527467 CT47B1P0C2W7 299 aaPredicted RBP8.79□□□□□ -1
CTNND1-216ENST00000527467 TSHZ2Q9NRE2 1034 aa8.79□□□□□ -1
CTNND1-216ENST00000527467 ODF2Q5BJF6 829 aa8.79□□□□□ -1
CTNND1-216ENST00000527467 NCKAP5LQ9HCH0 1330 aa8.79□□□□□ -1
CTNND1-216ENST00000527467 TRAPPC8Q9Y2L5 1435 aa8.79□□□□□ -1
CTNND1-216ENST00000527467 NAP1L1P55209 391 aaKnown RBP8.79□□□□□ -1
CTNND1-216ENST00000527467 NOL8Q76FK4 1167 aaKnown RBP8.79□□□□□ -1
CTNND1-216ENST00000527467 CASKIN1Q8WXD9 1431 aa8.78□□□□□ -1
CTNND1-216ENST00000527467 EZRP15311 586 aaKnown RBP8.78□□□□□ -1
CTNND1-216ENST00000527467 ILDR1Q86SU0 546 aaPredicted RBP8.78□□□□□ -1
CTNND1-216ENST00000527467 FOXD4L5Q5VV16 416 aaPredicted RBP8.78□□□□□ -1
CTNND1-216ENST00000527467 FOXD4L4Q8WXT5 416 aaPredicted RBP8.78□□□□□ -1
CTNND1-216ENST00000527467 KIF21BO75037 1637 aa8.78□□□□□ -1
CTNND1-216ENST00000527467 DHX57Q6P158 1386 aaKnown RBP8.78□□□□□ -1
CTNND1-216ENST00000527467 UGGT2Q9NYU1 1516 aa8.77□□□□□ -1
CTNND1-216ENST00000527467 HMGN5P82970 282 aaKnown RBP8.77□□□□□ -1.01
CTNND1-216ENST00000527467 GORABQ5T7V8 394 aa8.77□□□□□ -1.01
CTNND1-216ENST00000527467 ANKRD18AQ8IVF6 992 aa8.77□□□□□ -1.01
CTNND1-216ENST00000527467 FAM184AQ8NB25 1140 aa8.77□□□□□ -1.01
CTNND1-216ENST00000527467 HOOK1Q9UJC3 728 aaKnown RBP8.77□□□□□ -1.01
CTNND1-216ENST00000527467 BIVM-ERCC5R4GMW8 1640 aa8.77□□□□□ -1.01
CTNND1-216ENST00000527467 YEATS2Q9ULM3 1422 aa8.77□□□□□ -1.01
CTNND1-216ENST00000527467 TRIM6-TRIM34B2RNG4 842 aa8.77□□□□□ -1.01
CTNND1-216ENST00000527467 HSP90AB2PQ58FF8 381 aa8.77□□□□□ -1.01
CTNND1-216ENST00000527467 TARBP1Q13395 1621 aaKnown RBP8.77□□□□□ -1.01
CTNND1-216ENST00000527467 KIF15Q9NS87 1388 aa8.77□□□□□ -1.01
CTNND1-216ENST00000527467 RALBP1Q15311 655 aa8.77□□□□□ -1.01
CTNND1-216ENST00000527467 MAPKBP1O60336 1514 aa8.77□□□□□ -1.01
CTNND1-216ENST00000527467 C16orf71Q8IYS4 520 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-216ENST00000527467 HDAC5Q9UQL6 1122 aa8.76□□□□□ -1.01
CTNND1-216ENST00000527467 CHMP4AQ9BY43 222 aa8.76□□□□□ -1.01
CTNND1-216ENST00000527467 SEPT11Q9NVA2 429 aaKnown RBP8.76□□□□□ -1.01
CTNND1-216ENST00000527467 TERF2IPQ9NYB0 399 aa8.76□□□□□ -1.01
CTNND1-216ENST00000527467 CCDC39Q9UFE4 941 aa8.76□□□□□ -1.01
CTNND1-216ENST00000527467 POLD1P28340 1107 aa8.76□□□□□ -1.01
CTNND1-216ENST00000527467 AEBP1Q8IUX7 1158 aa8.76□□□□□ -1.01
CTNND1-216ENST00000527467 RPGRIP1LQ68CZ1 1315 aa8.75□□□□□ -1.01
CTNND1-216ENST00000527467 CNKSR2Q8WXI2 1034 aa8.75□□□□□ -1.01
CTNND1-216ENST00000527467 MAGI3Q5TCQ9 1506 aa8.75□□□□□ -1.01
CTNND1-216ENST00000527467 GOLGA6L10A6NI86 522 aa8.75□□□□□ -1.01
CTNND1-216ENST00000527467 NF2P35240 595 aa8.75□□□□□ -1.01
CTNND1-216ENST00000527467 RPRD2Q5VT52 1461 aaKnown RBP8.75□□□□□ -1.01
CTNND1-216ENST00000527467 ITPRIPQ8IWB1 547 aa8.75□□□□□ -1.01
CTNND1-216ENST00000527467 ADAMTS2O95450 1211 aa8.75□□□□□ -1.01
CTNND1-216ENST00000527467 AKAP17AQ02040 695 aaKnown RBP8.75□□□□□ -1.01
CTNND1-216ENST00000527467 MAPK8IP2Q13387 824 aaPredicted RBP8.74□□□□□ -1.01
CTNND1-216ENST00000527467 TOMM22Q9NS69 142 aa8.74□□□□□ -1.01
CTNND1-216ENST00000527467 CARD11Q9BXL7 1154 aa8.74□□□□□ -1.01
CTNND1-216ENST00000527467 ERLIN2O94905 339 aa8.74□□□□□ -1.01
CTNND1-216ENST00000527467 ZMYM3Q14202 1370 aa8.74□□□□□ -1.01
CTNND1-216ENST00000527467 C8orf37Q96NL8 207 aa8.74□□□□□ -1.01
CTNND1-216ENST00000527467 CENPHQ9H3R5 247 aa8.74□□□□□ -1.01
CTNND1-216ENST00000527467 CLASP1Q7Z460 1538 aa8.73□□□□□ -1.01
CTNND1-216ENST00000527467 ANKRD62A6NC57 917 aa8.73□□□□□ -1.01
CTNND1-216ENST00000527467 CCAR1Q8IX12 1150 aaKnown RBP8.73□□□□□ -1.01
CTNND1-216ENST00000527467 PRDM11Q9NQV5 511 aa8.73□□□□□ -1.01
CTNND1-216ENST00000527467 CCP110O43303 1012 aa8.73□□□□□ -1.01
CTNND1-216ENST00000527467 EIF3JO75822 258 aaKnown RBP8.73□□□□□ -1.01
CTNND1-216ENST00000527467 SEPT7Q16181 437 aaKnown RBP8.73□□□□□ -1.01
CTNND1-216ENST00000527467 ENOX2Q16206 610 aaKnown RBP8.73□□□□□ -1.01
CTNND1-216ENST00000527467 SKIDA1Q1XH10 827 aa8.73□□□□□ -1.01
CTNND1-216ENST00000527467 CPLX2Q6PUV4 134 aaKnown RBP8.73□□□□□ -1.01
CTNND1-216ENST00000527467 SASS6Q6UVJ0 657 aa8.73□□□□□ -1.01
CTNND1-216ENST00000527467 SPATA24Q86W54 205 aa8.73□□□□□ -1.01
CTNND1-216ENST00000527467 RTF1Q92541 710 aaKnown RBP8.73□□□□□ -1.01
CTNND1-216ENST00000527467 NPHP3Q7Z494 1330 aa8.73□□□□□ -1.01
CTNND1-216ENST00000527467 OFD1O75665 1012 aa8.73□□□□□ -1.01
CTNND1-216ENST00000527467 C19orf44Q9H6X5 657 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms