RNA–Protein interactions for RNA: ENST00000526846.1

CHD7-204, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-204ENST00000526846 SIRT1Q96EB6 747 aa23.34■■□□□ 1.33
CHD7-204ENST00000526846 WAPLQ7Z5K2 1190 aa23.33■■□□□ 1.33
CHD7-204ENST00000526846 C1orf167Q5SNV9 1468 aa23.31■■□□□ 1.32
CHD7-204ENST00000526846 TRPM1Q7Z4N2 1603 aa23.31■■□□□ 1.32
CHD7-204ENST00000526846 L3MBTL2Q969R5 705 aa23.31■■□□□ 1.32
CHD7-204ENST00000526846 ADGRB2O60241 1585 aa23.3■■□□□ 1.32
CHD7-204ENST00000526846 BRINP3Q76B58 766 aa23.29■■□□□ 1.32
CHD7-204ENST00000526846 MED1Q15648 1581 aaPredicted RBP23.28■■□□□ 1.32
CHD7-204ENST00000526846 RGPD8O14715 1765 aaPredicted RBP23.28■■□□□ 1.32
CHD7-204ENST00000526846 NEUROD1Q13562 356 aa23.26■■□□□ 1.31
CHD7-204ENST00000526846 PRAM1Q96QH2 718 aa23.24■■□□□ 1.31
CHD7-204ENST00000526846 SHPRHQ149N8 1683 aa23.24■■□□□ 1.31
CHD7-204ENST00000526846 USP32Q8NFA0 1604 aa23.23■■□□□ 1.31
CHD7-204ENST00000526846 PCGF6Q9BYE7 350 aa23.23■■□□□ 1.31
CHD7-204ENST00000526846 TRAK1Q9UPV9 953 aa23.23■■□□□ 1.31
CHD7-204ENST00000526846 NBPF1Q3BBV0 1214 aa23.21■■□□□ 1.31
CHD7-204ENST00000526846 KIF1AQ12756 1690 aa23.19■■□□□ 1.3
CHD7-204ENST00000526846 ORAI2Q96SN7 254 aa23.18■■□□□ 1.3
CHD7-204ENST00000526846 SAFB2Q14151 953 aaKnown RBP eCLIP23.17■■□□□ 1.3
CHD7-204ENST00000526846 JCADQ9P266 1359 aa23.15■■□□□ 1.3
CHD7-204ENST00000526846 DDX17Q92841 729 aaKnown RBP23.15■■□□□ 1.3
CHD7-204ENST00000526846 POGKQ9P215 609 aa23.15■■□□□ 1.3
CHD7-204ENST00000526846 QRICH2Q9H0J4 1663 aa23.15■■□□□ 1.3
CHD7-204ENST00000526846 NBPF8Q3BBV2 869 aa23.14■■□□□ 1.29
CHD7-204ENST00000526846 TONSLQ96HA7 1378 aa23.13■■□□□ 1.29
CHD7-204ENST00000526846 DISP3Q9P2K9 1392 aa23.13■■□□□ 1.29
CHD7-204ENST00000526846 TULP4Q9NRJ4 1543 aa23.12■■□□□ 1.29
CHD7-204ENST00000526846 PXDNQ92626 1479 aa23.11■■□□□ 1.29
CHD7-204ENST00000526846 ANKARQ7Z5J8 1434 aa23.11■■□□□ 1.29
CHD7-204ENST00000526846 GPRASP1Q5JY77 1395 aa23.11■■□□□ 1.29
CHD7-204ENST00000526846 SOS2Q07890 1332 aaPredicted RBP23.1■■□□□ 1.29
CHD7-204ENST00000526846 MINK1Q8N4C8 1332 aaPredicted RBP23.1■■□□□ 1.29
CHD7-204ENST00000526846 NUTM2FA1L443 756 aa23.1■■□□□ 1.29
CHD7-204ENST00000526846 ITSN1Q15811 1721 aa23.1■■□□□ 1.29
CHD7-204ENST00000526846 RALGAPBQ86X10 1494 aa23.1■■□□□ 1.29
CHD7-204ENST00000526846 TOPAZ1Q8N9V7 1692 aa23.09■■□□□ 1.29
CHD7-204ENST00000526846 HIRIP3Q9BW71 556 aaPredicted RBP23.09■■□□□ 1.29
CHD7-204ENST00000526846 LRP6O75581 1613 aa23.08■■□□□ 1.29
CHD7-204ENST00000526846 ESCO1Q5FWF5 840 aa23.08■■□□□ 1.29
CHD7-204ENST00000526846 COL22A1Q8NFW1 1626 aaPredicted RBP23.08■■□□□ 1.28
CHD7-204ENST00000526846 PRR36Q9H6K5 1346 aa23.07■■□□□ 1.28
CHD7-204ENST00000526846 CLSPNQ9HAW4 1339 aa23.07■■□□□ 1.28
CHD7-204ENST00000526846 ATP7BP35670 1465 aa23.06■■□□□ 1.28
CHD7-204ENST00000526846 ROCK2O75116 1388 aaKnown RBP23.06■■□□□ 1.28
CHD7-204ENST00000526846 PNPLA6Q8IY17 1366 aa23.05■■□□□ 1.28
CHD7-204ENST00000526846 WASLO00401 505 aaPredicted RBP23.05■■□□□ 1.28
CHD7-204ENST00000526846 SPATA31A6Q5VVP1 1343 aa23.04■■□□□ 1.28
CHD7-204ENST00000526846 NPHP3Q7Z494 1330 aa23.04■■□□□ 1.28
CHD7-204ENST00000526846 EIF3AQ14152 1382 aaKnown RBP23.03■■□□□ 1.28
CHD7-204ENST00000526846 TRPM3Q9HCF6 1732 aaPredicted RBP23.03■■□□□ 1.28
CHD7-204ENST00000526846 LRRC59Q96AG4 307 aaKnown RBP23.03■■□□□ 1.28
CHD7-204ENST00000526846 CENPJQ9HC77 1338 aaPredicted RBP23.03■■□□□ 1.28
CHD7-204ENST00000526846 FOXO3O43524 673 aa23.01■■□□□ 1.27
CHD7-204ENST00000526846 PHF8Q9UPP1 1060 aa23.01■■□□□ 1.27
CHD7-204ENST00000526846 MARF1Q9Y4F3 1742 aaKnown RBP22.97■■□□□ 1.27
CHD7-204ENST00000526846 ALS2Q96Q42 1657 aa22.97■■□□□ 1.27
CHD7-204ENST00000526846 XPCQ01831 940 aaPredicted RBP22.96■■□□□ 1.27
CHD7-204ENST00000526846 CDK19Q9BWU1 502 aa22.96■■□□□ 1.27
CHD7-204ENST00000526846 RGS17Q9UGC6 210 aaPredicted RBP22.96■■□□□ 1.27
CHD7-204ENST00000526846 ABCA3Q99758 1704 aa22.96■■□□□ 1.27
CHD7-204ENST00000526846 ILDR2Q71H61 639 aa22.95■■□□□ 1.26
CHD7-204ENST00000526846 PMFBP1Q8TBY8 1022 aa22.93■■□□□ 1.26
CHD7-204ENST00000526846 NUDT16Q96DE0 195 aaKnown RBP22.93■■□□□ 1.26
CHD7-204ENST00000526846 TNS3Q68CZ2 1445 aa22.92■■□□□ 1.26
CHD7-204ENST00000526846 SBNO1A3KN83 1393 aa22.92■■□□□ 1.26
CHD7-204ENST00000526846 SBNO2Q9Y2G9 1366 aa22.92■■□□□ 1.26
CHD7-204ENST00000526846 SPATA31A3Q5VYP0 1347 aa22.92■■□□□ 1.26
CHD7-204ENST00000526846 KRT28Q7Z3Y7 464 aa22.92■■□□□ 1.26
CHD7-204ENST00000526846 CARD11Q9BXL7 1154 aa22.92■■□□□ 1.26
CHD7-204ENST00000526846 TIMELESSQ9UNS1 1208 aa22.92■■□□□ 1.26
CHD7-204ENST00000526846 CRYBG1Q9Y4K1 1723 aa22.91■■□□□ 1.26
CHD7-204ENST00000526846 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
CHD7-204ENST00000526846 POLR3AO14802 1390 aaPredicted RBP22.89■■□□□ 1.25
CHD7-204ENST00000526846 NUTM2BA6NNL0 878 aaPredicted RBP22.87■■□□□ 1.25
CHD7-204ENST00000526846 NUTM2EB1AL46 878 aaPredicted RBP22.87■■□□□ 1.25
CHD7-204ENST00000526846 NUTM2AQ8IVF1 878 aaPredicted RBP22.87■■□□□ 1.25
CHD7-204ENST00000526846 CCER1Q8TC90 406 aaPredicted RBP22.87■■□□□ 1.25
CHD7-204ENST00000526846 CCDC61Q9Y6R9 512 aa22.87■■□□□ 1.25
CHD7-204ENST00000526846 CABP2Q9NPB3 220 aa22.86■■□□□ 1.25
CHD7-204ENST00000526846 AKAP12Q02952 1782 aa22.86■■□□□ 1.25
CHD7-204ENST00000526846 PLEKHG3A1L390 1219 aa22.85■■□□□ 1.25
CHD7-204ENST00000526846 PSME1Q06323 249 aa22.85■■□□□ 1.25
CHD7-204ENST00000526846 PPIP5K1Q6PFW1 1433 aa22.84■■□□□ 1.25
CHD7-204ENST00000526846 SRPK2P78362 688 aaKnown RBP22.84■■□□□ 1.25
CHD7-204ENST00000526846 EVC2Q86UK5 1308 aa22.83■■□□□ 1.25
CHD7-204ENST00000526846 MEX3CQ5U5Q3 659 aaKnown RBP22.82■■□□□ 1.24
CHD7-204ENST00000526846 POTEAQ6S8J7 498 aa22.82■■□□□ 1.24
CHD7-204ENST00000526846 NGDNQ8NEJ9 315 aaKnown RBP22.82■■□□□ 1.24
CHD7-204ENST00000526846 ACEP12821 1306 aa22.82■■□□□ 1.24
CHD7-204ENST00000526846 ARHGEF10O15013 1369 aa22.81■■□□□ 1.24
CHD7-204ENST00000526846 PHRF1Q9P1Y6 1649 aaKnown RBP22.8■■□□□ 1.24
CHD7-204ENST00000526846 NRKQ7Z2Y5 1582 aa22.78■■□□□ 1.24
CHD7-204ENST00000526846 MON2Q7Z3U7 1717 aa22.78■■□□□ 1.24
CHD7-204ENST00000526846 TESK2Q96S53 571 aa22.78■■□□□ 1.24
CHD7-204ENST00000526846 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.78■■□□□ 1.24
CHD7-204ENST00000526846 AFF2P51816 1311 aa22.78■■□□□ 1.24
CHD7-204ENST00000526846 ADAMTS2O95450 1211 aa22.77■■□□□ 1.24
CHD7-204ENST00000526846 PLCH1Q4KWH8 1693 aa22.77■■□□□ 1.24
CHD7-204ENST00000526846 USP47Q96K76 1375 aa22.76■■□□□ 1.23
CHD7-204ENST00000526846 C8orf37Q96NL8 207 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms