RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 SAFB2Q14151 953 aaKnown RBP eCLIP23.32■■□□□ 1.32
SSSCA1-202ENST00000526433 BRINP3Q76B58 766 aa23.32■■□□□ 1.32
SSSCA1-202ENST00000526433 KIAA1210Q9ULL0 1709 aa23.31■■□□□ 1.32
SSSCA1-202ENST00000526433 DLC1Q96QB1 1528 aa23.3■■□□□ 1.32
SSSCA1-202ENST00000526433 TONSLQ96HA7 1378 aa23.28■■□□□ 1.32
SSSCA1-202ENST00000526433 C1orf167Q5SNV9 1468 aa23.28■■□□□ 1.32
SSSCA1-202ENST00000526433 ORAI2Q96SN7 254 aa23.26■■□□□ 1.31
SSSCA1-202ENST00000526433 NUTM2FA1L443 756 aa23.25■■□□□ 1.31
SSSCA1-202ENST00000526433 NBPF8Q3BBV2 869 aa23.25■■□□□ 1.31
SSSCA1-202ENST00000526433 CDC42BPGQ6DT37 1551 aa23.24■■□□□ 1.31
SSSCA1-202ENST00000526433 PHLPP1O60346 1717 aa23.24■■□□□ 1.31
SSSCA1-202ENST00000526433 ESCO1Q5FWF5 840 aa23.22■■□□□ 1.31
SSSCA1-202ENST00000526433 MINK1Q8N4C8 1332 aaPredicted RBP23.22■■□□□ 1.31
SSSCA1-202ENST00000526433 DDX17Q92841 729 aaKnown RBP23.21■■□□□ 1.31
SSSCA1-202ENST00000526433 HIRIP3Q9BW71 556 aaPredicted RBP23.21■■□□□ 1.31
SSSCA1-202ENST00000526433 CLSPNQ9HAW4 1339 aa23.2■■□□□ 1.3
SSSCA1-202ENST00000526433 ARHGEF28Q8N1W1 1705 aaKnown RBP23.19■■□□□ 1.3
SSSCA1-202ENST00000526433 AHDC1Q5TGY3 1603 aaPredicted RBP23.19■■□□□ 1.3
SSSCA1-202ENST00000526433 TRPM1Q7Z4N2 1603 aa23.19■■□□□ 1.3
SSSCA1-202ENST00000526433 CCER1Q8TC90 406 aaPredicted RBP23.18■■□□□ 1.3
SSSCA1-202ENST00000526433 FMN2Q9NZ56 1722 aa23.18■■□□□ 1.3
SSSCA1-202ENST00000526433 ROCK2O75116 1388 aaKnown RBP23.16■■□□□ 1.3
SSSCA1-202ENST00000526433 COL16A1Q07092 1604 aaPredicted RBP23.16■■□□□ 1.3
SSSCA1-202ENST00000526433 WASLO00401 505 aaPredicted RBP23.16■■□□□ 1.3
SSSCA1-202ENST00000526433 NHSL1Q5SYE7 1610 aa23.15■■□□□ 1.3
SSSCA1-202ENST00000526433 RGPD8O14715 1765 aaPredicted RBP23.14■■□□□ 1.29
SSSCA1-202ENST00000526433 JCADQ9P266 1359 aa23.14■■□□□ 1.29
SSSCA1-202ENST00000526433 LRRC59Q96AG4 307 aaKnown RBP23.13■■□□□ 1.29
SSSCA1-202ENST00000526433 ADGRB2O60241 1585 aa23.13■■□□□ 1.29
SSSCA1-202ENST00000526433 CENPJQ9HC77 1338 aaPredicted RBP23.12■■□□□ 1.29
SSSCA1-202ENST00000526433 FOXO3O43524 673 aa23.12■■□□□ 1.29
SSSCA1-202ENST00000526433 TIMELESSQ9UNS1 1208 aa23.11■■□□□ 1.29
SSSCA1-202ENST00000526433 PHF8Q9UPP1 1060 aa23.11■■□□□ 1.29
SSSCA1-202ENST00000526433 DISP3Q9P2K9 1392 aa23.11■■□□□ 1.29
SSSCA1-202ENST00000526433 SOS2Q07890 1332 aaPredicted RBP23.1■■□□□ 1.29
SSSCA1-202ENST00000526433 CDK19Q9BWU1 502 aa23.1■■□□□ 1.29
SSSCA1-202ENST00000526433 NPHP3Q7Z494 1330 aa23.09■■□□□ 1.29
SSSCA1-202ENST00000526433 CARD11Q9BXL7 1154 aa23.09■■□□□ 1.29
SSSCA1-202ENST00000526433 GPRASP1Q5JY77 1395 aa23.09■■□□□ 1.29
SSSCA1-202ENST00000526433 ANKARQ7Z5J8 1434 aa23.08■■□□□ 1.28
SSSCA1-202ENST00000526433 PRR36Q9H6K5 1346 aa23.08■■□□□ 1.28
SSSCA1-202ENST00000526433 MED1Q15648 1581 aaPredicted RBP23.07■■□□□ 1.28
SSSCA1-202ENST00000526433 EIF3AQ14152 1382 aaKnown RBP23.07■■□□□ 1.28
SSSCA1-202ENST00000526433 XPCQ01831 940 aaPredicted RBP23.07■■□□□ 1.28
SSSCA1-202ENST00000526433 PMFBP1Q8TBY8 1022 aa23.06■■□□□ 1.28
SSSCA1-202ENST00000526433 USP32Q8NFA0 1604 aa23.06■■□□□ 1.28
SSSCA1-202ENST00000526433 RALGAPBQ86X10 1494 aa23.05■■□□□ 1.28
SSSCA1-202ENST00000526433 NUDT16Q96DE0 195 aaKnown RBP23.05■■□□□ 1.28
SSSCA1-202ENST00000526433 KRT28Q7Z3Y7 464 aa23.04■■□□□ 1.28
SSSCA1-202ENST00000526433 SPATA31A6Q5VVP1 1343 aa23.04■■□□□ 1.28
SSSCA1-202ENST00000526433 TULP4Q9NRJ4 1543 aa23.03■■□□□ 1.28
SSSCA1-202ENST00000526433 KIF1AQ12756 1690 aa23.03■■□□□ 1.28
SSSCA1-202ENST00000526433 SHPRHQ149N8 1683 aa23.03■■□□□ 1.28
SSSCA1-202ENST00000526433 QRICH2Q9H0J4 1663 aa23.02■■□□□ 1.28
SSSCA1-202ENST00000526433 PXDNQ92626 1479 aa23.01■■□□□ 1.27
SSSCA1-202ENST00000526433 PSME1Q06323 249 aa23.01■■□□□ 1.27
SSSCA1-202ENST00000526433 PNPLA6Q8IY17 1366 aa23.01■■□□□ 1.27
SSSCA1-202ENST00000526433 NUTM2BA6NNL0 878 aaPredicted RBP23■■□□□ 1.27
SSSCA1-202ENST00000526433 NUTM2EB1AL46 878 aaPredicted RBP23■■□□□ 1.27
SSSCA1-202ENST00000526433 SRPK2P78362 688 aaKnown RBP23■■□□□ 1.27
SSSCA1-202ENST00000526433 NUTM2AQ8IVF1 878 aaPredicted RBP23■■□□□ 1.27
SSSCA1-202ENST00000526433 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
SSSCA1-202ENST00000526433 CABP2Q9NPB3 220 aa22.99■■□□□ 1.27
SSSCA1-202ENST00000526433 CCDC61Q9Y6R9 512 aa22.99■■□□□ 1.27
SSSCA1-202ENST00000526433 NGDNQ8NEJ9 315 aaKnown RBP22.98■■□□□ 1.27
SSSCA1-202ENST00000526433 EVC2Q86UK5 1308 aa22.97■■□□□ 1.27
SSSCA1-202ENST00000526433 ATP7BP35670 1465 aa22.97■■□□□ 1.27
SSSCA1-202ENST00000526433 SPATA31A3Q5VYP0 1347 aa22.95■■□□□ 1.26
SSSCA1-202ENST00000526433 LRP6O75581 1613 aa22.94■■□□□ 1.26
SSSCA1-202ENST00000526433 PLEKHG3A1L390 1219 aa22.94■■□□□ 1.26
SSSCA1-202ENST00000526433 MEX3CQ5U5Q3 659 aaKnown RBP22.94■■□□□ 1.26
SSSCA1-202ENST00000526433 ITSN1Q15811 1721 aa22.93■■□□□ 1.26
SSSCA1-202ENST00000526433 RGS17Q9UGC6 210 aaPredicted RBP22.92■■□□□ 1.26
SSSCA1-202ENST00000526433 SBNO1A3KN83 1393 aa22.91■■□□□ 1.26
SSSCA1-202ENST00000526433 ST20-MTHFSA0A0A6YYL1 179 aa22.91■■□□□ 1.26
SSSCA1-202ENST00000526433 ACEP12821 1306 aa22.9■■□□□ 1.26
SSSCA1-202ENST00000526433 LMOD2Q6P5Q4 547 aa22.9■■□□□ 1.26
SSSCA1-202ENST00000526433 SBNO2Q9Y2G9 1366 aa22.89■■□□□ 1.26
SSSCA1-202ENST00000526433 CABP1Q9NZU7 370 aa22.89■■□□□ 1.25
SSSCA1-202ENST00000526433 TOPAZ1Q8N9V7 1692 aa22.88■■□□□ 1.25
SSSCA1-202ENST00000526433 ADAMTS2O95450 1211 aa22.88■■□□□ 1.25
SSSCA1-202ENST00000526433 ILDR2Q71H61 639 aa22.88■■□□□ 1.25
SSSCA1-202ENST00000526433 TNS3Q68CZ2 1445 aa22.88■■□□□ 1.25
SSSCA1-202ENST00000526433 PPIP5K1Q6PFW1 1433 aa22.88■■□□□ 1.25
SSSCA1-202ENST00000526433 COL22A1Q8NFW1 1626 aaPredicted RBP22.87■■□□□ 1.25
SSSCA1-202ENST00000526433 POLR3AO14802 1390 aaPredicted RBP22.87■■□□□ 1.25
SSSCA1-202ENST00000526433 PAK3O75914 559 aaPredicted RBP22.86■■□□□ 1.25
SSSCA1-202ENST00000526433 TESK2Q96S53 571 aa22.86■■□□□ 1.25
SSSCA1-202ENST00000526433 PLEKHG5O94827 1062 aa22.84■■□□□ 1.25
SSSCA1-202ENST00000526433 TRPM3Q9HCF6 1732 aaPredicted RBP22.84■■□□□ 1.25
SSSCA1-202ENST00000526433 ARHGEF10O15013 1369 aa22.84■■□□□ 1.25
SSSCA1-202ENST00000526433 USP47Q96K76 1375 aa22.84■■□□□ 1.25
SSSCA1-202ENST00000526433 CABLES1Q8TDN4 633 aa22.83■■□□□ 1.25
SSSCA1-202ENST00000526433 C8orf37Q96NL8 207 aa22.83■■□□□ 1.25
SSSCA1-202ENST00000526433 SLC24A1O60721 1099 aa22.82■■□□□ 1.24
SSSCA1-202ENST00000526433 POTEAQ6S8J7 498 aa22.82■■□□□ 1.24
SSSCA1-202ENST00000526433 NGLY1Q96IV0 654 aa22.82■■□□□ 1.24
SSSCA1-202ENST00000526433 ATAD2Q6PL18 1390 aa22.81■■□□□ 1.24
SSSCA1-202ENST00000526433 ZNF772Q68DY9 489 aaPredicted RBP22.8■■□□□ 1.24
SSSCA1-202ENST00000526433 AFF2P51816 1311 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms