RNA–Protein interactions for RNA: ENST00000525760.1

CAPN8-211, Transcript of calpain 8, humanhuman

TSL 4

Gene CAPN8, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-211ENST00000525760 DLC1Q96QB1 1528 aa13.32□□□□□ -0.28
CAPN8-211ENST00000525760 FMN2Q9NZ56 1722 aa13.31□□□□□ -0.28
CAPN8-211ENST00000525760 SIRT1Q96EB6 747 aa13.31□□□□□ -0.28
CAPN8-211ENST00000525760 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
CAPN8-211ENST00000525760 DDX17Q92841 729 aaKnown RBP13.3□□□□□ -0.28
CAPN8-211ENST00000525760 ORAI2Q96SN7 254 aa13.3□□□□□ -0.28
CAPN8-211ENST00000525760 SHPRHQ149N8 1683 aa13.29□□□□□ -0.28
CAPN8-211ENST00000525760 STAC3Q96MF2 364 aa13.29□□□□□ -0.28
CAPN8-211ENST00000525760 ARHGEF28Q8N1W1 1705 aaKnown RBP13.29□□□□□ -0.28
CAPN8-211ENST00000525760 KIAA1210Q9ULL0 1709 aa13.29□□□□□ -0.28
CAPN8-211ENST00000525760 RGPD8O14715 1765 aaPredicted RBP13.29□□□□□ -0.28
CAPN8-211ENST00000525760 JCADQ9P266 1359 aa13.28□□□□□ -0.28
CAPN8-211ENST00000525760 PRAM1Q96QH2 718 aa13.27□□□□□ -0.29
CAPN8-211ENST00000525760 RGS17Q9UGC6 210 aaPredicted RBP13.27□□□□□ -0.29
CAPN8-211ENST00000525760 LRP6O75581 1613 aa13.27□□□□□ -0.29
CAPN8-211ENST00000525760 ADGRB2O60241 1585 aa13.26□□□□□ -0.29
CAPN8-211ENST00000525760 USP32Q8NFA0 1604 aa13.26□□□□□ -0.29
CAPN8-211ENST00000525760 L3MBTL2Q969R5 705 aa13.26□□□□□ -0.29
CAPN8-211ENST00000525760 TRAK1Q9UPV9 953 aa13.25□□□□□ -0.29
CAPN8-211ENST00000525760 SOS2Q07890 1332 aaPredicted RBP13.24□□□□□ -0.29
CAPN8-211ENST00000525760 NUTM2FA1L443 756 aa13.24□□□□□ -0.29
CAPN8-211ENST00000525760 SAFB2Q14151 953 aaKnown RBP eCLIP13.24□□□□□ -0.29
CAPN8-211ENST00000525760 NBPF1Q3BBV0 1214 aa13.24□□□□□ -0.29
CAPN8-211ENST00000525760 PXDNQ92626 1479 aa13.23□□□□□ -0.29
CAPN8-211ENST00000525760 TRPM1Q7Z4N2 1603 aa13.22□□□□□ -0.29
CAPN8-211ENST00000525760 NEUROD1Q13562 356 aa13.22□□□□□ -0.29
CAPN8-211ENST00000525760 PNPLA6Q8IY17 1366 aa13.21□□□□□ -0.29
CAPN8-211ENST00000525760 SPATA31A6Q5VVP1 1343 aa13.21□□□□□ -0.29
CAPN8-211ENST00000525760 ESCO1Q5FWF5 840 aa13.21□□□□□ -0.29
CAPN8-211ENST00000525760 KIF1AQ12756 1690 aa13.21□□□□□ -0.3
CAPN8-211ENST00000525760 POGKQ9P215 609 aa13.2□□□□□ -0.3
CAPN8-211ENST00000525760 MINK1Q8N4C8 1332 aaPredicted RBP13.19□□□□□ -0.3
CAPN8-211ENST00000525760 PRR36Q9H6K5 1346 aa13.19□□□□□ -0.3
CAPN8-211ENST00000525760 FOXO3O43524 673 aa13.19□□□□□ -0.3
CAPN8-211ENST00000525760 LRRC59Q96AG4 307 aaKnown RBP13.19□□□□□ -0.3
CAPN8-211ENST00000525760 PHF23Q9BUL5 403 aaPredicted RBP13.19□□□□□ -0.3
CAPN8-211ENST00000525760 HIRIP3Q9BW71 556 aaPredicted RBP13.19□□□□□ -0.3
CAPN8-211ENST00000525760 COL22A1Q8NFW1 1626 aaPredicted RBP13.19□□□□□ -0.3
CAPN8-211ENST00000525760 XPCQ01831 940 aaPredicted RBP13.18□□□□□ -0.3
CAPN8-211ENST00000525760 NBPF8Q3BBV2 869 aa13.18□□□□□ -0.3
CAPN8-211ENST00000525760 ANKARQ7Z5J8 1434 aa13.18□□□□□ -0.3
CAPN8-211ENST00000525760 POTEAQ6S8J7 498 aa13.17□□□□□ -0.3
CAPN8-211ENST00000525760 TULP4Q9NRJ4 1543 aa13.17□□□□□ -0.3
CAPN8-211ENST00000525760 NPHP3Q7Z494 1330 aa13.16□□□□□ -0.3
CAPN8-211ENST00000525760 NUTM2BA6NNL0 878 aaPredicted RBP13.15□□□□□ -0.3
CAPN8-211ENST00000525760 NUTM2EB1AL46 878 aaPredicted RBP13.15□□□□□ -0.3
CAPN8-211ENST00000525760 WASLO00401 505 aaPredicted RBP13.15□□□□□ -0.3
CAPN8-211ENST00000525760 NUTM2AQ8IVF1 878 aaPredicted RBP13.15□□□□□ -0.3
CAPN8-211ENST00000525760 PHF8Q9UPP1 1060 aa13.15□□□□□ -0.3
CAPN8-211ENST00000525760 ATP7BP35670 1465 aa13.15□□□□□ -0.3
CAPN8-211ENST00000525760 TOPAZ1Q8N9V7 1692 aa13.15□□□□□ -0.31
CAPN8-211ENST00000525760 QRICH2Q9H0J4 1663 aa13.15□□□□□ -0.31
CAPN8-211ENST00000525760 TRPM3Q9HCF6 1732 aaPredicted RBP13.14□□□□□ -0.31
CAPN8-211ENST00000525760 SPATA31A3Q5VYP0 1347 aa13.13□□□□□ -0.31
CAPN8-211ENST00000525760 GPRASP1Q5JY77 1395 aa13.12□□□□□ -0.31
CAPN8-211ENST00000525760 SOCS7O14512 581 aa13.12□□□□□ -0.31
CAPN8-211ENST00000525760 KRT28Q7Z3Y7 464 aa13.12□□□□□ -0.31
CAPN8-211ENST00000525760 PMFBP1Q8TBY8 1022 aa13.12□□□□□ -0.31
CAPN8-211ENST00000525760 ITSN1Q15811 1721 aa13.12□□□□□ -0.31
CAPN8-211ENST00000525760 MARF1Q9Y4F3 1742 aaKnown RBP13.12□□□□□ -0.31
CAPN8-211ENST00000525760 ALS2Q96Q42 1657 aa13.11□□□□□ -0.31
CAPN8-211ENST00000525760 ABCA3Q99758 1704 aa13.1□□□□□ -0.31
CAPN8-211ENST00000525760 EIF3AQ14152 1382 aaKnown RBP13.1□□□□□ -0.31
CAPN8-211ENST00000525760 CDK19Q9BWU1 502 aa13.1□□□□□ -0.31
CAPN8-211ENST00000525760 PCGF6Q9BYE7 350 aa13.1□□□□□ -0.31
CAPN8-211ENST00000525760 CENPJQ9HC77 1338 aaPredicted RBP13.1□□□□□ -0.31
CAPN8-211ENST00000525760 RALGAPBQ86X10 1494 aa13.1□□□□□ -0.31
CAPN8-211ENST00000525760 SBNO1A3KN83 1393 aa13.09□□□□□ -0.31
CAPN8-211ENST00000525760 ROCK2O75116 1388 aaKnown RBP13.09□□□□□ -0.31
CAPN8-211ENST00000525760 TONSLQ96HA7 1378 aa13.09□□□□□ -0.31
CAPN8-211ENST00000525760 MEX3CQ5U5Q3 659 aaKnown RBP13.09□□□□□ -0.31
CAPN8-211ENST00000525760 TNS3Q68CZ2 1445 aa13.09□□□□□ -0.31
CAPN8-211ENST00000525760 NUDT16Q96DE0 195 aaKnown RBP13.09□□□□□ -0.31
CAPN8-211ENST00000525760 ADAMTS2O95450 1211 aa13.08□□□□□ -0.32
CAPN8-211ENST00000525760 AFF2P51816 1311 aa13.08□□□□□ -0.32
CAPN8-211ENST00000525760 CRYBG1Q9Y4K1 1723 aa13.08□□□□□ -0.32
CAPN8-211ENST00000525760 PSME1Q06323 249 aa13.06□□□□□ -0.32
CAPN8-211ENST00000525760 C8orf37Q96NL8 207 aa13.06□□□□□ -0.32
CAPN8-211ENST00000525760 POLR3AO14802 1390 aaPredicted RBP13.06□□□□□ -0.32
CAPN8-211ENST00000525760 ZNF772Q68DY9 489 aaPredicted RBP13.05□□□□□ -0.32
CAPN8-211ENST00000525760 CABLES1Q8TDN4 633 aa13.05□□□□□ -0.32
CAPN8-211ENST00000525760 CCDC61Q9Y6R9 512 aa13.05□□□□□ -0.32
CAPN8-211ENST00000525760 PLEKHG3A1L390 1219 aa13.04□□□□□ -0.32
CAPN8-211ENST00000525760 FNBP4Q8N3X1 1017 aaPredicted RBP13.04□□□□□ -0.32
CAPN8-211ENST00000525760 CABP2Q9NPB3 220 aa13.04□□□□□ -0.32
CAPN8-211ENST00000525760 NGLY1Q96IV0 654 aa13.03□□□□□ -0.32
CAPN8-211ENST00000525760 BCL9LQ86UU0 1499 aa13.03□□□□□ -0.32
CAPN8-211ENST00000525760 NGDNQ8NEJ9 315 aaKnown RBP13.02□□□□□ -0.33
CAPN8-211ENST00000525760 CARD11Q9BXL7 1154 aa13.02□□□□□ -0.33
CAPN8-211ENST00000525760 ACEP12821 1306 aa13.02□□□□□ -0.33
CAPN8-211ENST00000525760 ARHGEF10O15013 1369 aa13.02□□□□□ -0.33
CAPN8-211ENST00000525760 PPIP5K1Q6PFW1 1433 aa13.02□□□□□ -0.33
CAPN8-211ENST00000525760 SRPK2P78362 688 aaKnown RBP13.01□□□□□ -0.33
CAPN8-211ENST00000525760 SBNO2Q9Y2G9 1366 aa13.01□□□□□ -0.33
CAPN8-211ENST00000525760 SLIT2O94813 1529 aa13.01□□□□□ -0.33
CAPN8-211ENST00000525760 PLCH1Q4KWH8 1693 aa13.01□□□□□ -0.33
CAPN8-211ENST00000525760 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.01□□□□□ -0.33
CAPN8-211ENST00000525760 PHRF1Q9P1Y6 1649 aaKnown RBP13□□□□□ -0.33
CAPN8-211ENST00000525760 ATRNO75882 1429 aa13□□□□□ -0.33
CAPN8-211ENST00000525760 PLEKHG5O94827 1062 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms