RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 NUTM2FA1L443 756 aa18.68■□□□□ 0.58
TRAPPC4-205ENST00000525079 SAFB2Q14151 953 aaKnown RBP eCLIP18.68■□□□□ 0.58
TRAPPC4-205ENST00000525079 TRIM26Q12899 539 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC4-205ENST00000525079 STAC3Q96MF2 364 aa18.66■□□□□ 0.58
TRAPPC4-205ENST00000525079 PRAM1Q96QH2 718 aa18.66■□□□□ 0.58
TRAPPC4-205ENST00000525079 SIN3AQ96ST3 1273 aa18.66■□□□□ 0.58
TRAPPC4-205ENST00000525079 TRAK1Q9UPV9 953 aa18.66■□□□□ 0.58
TRAPPC4-205ENST00000525079 NHSL1Q5SYE7 1610 aa18.66■□□□□ 0.58
TRAPPC4-205ENST00000525079 CDC42BPGQ6DT37 1551 aa18.65■□□□□ 0.58
TRAPPC4-205ENST00000525079 SIRT1Q96EB6 747 aa18.65■□□□□ 0.58
TRAPPC4-205ENST00000525079 ADGRB1O14514 1584 aa18.64■□□□□ 0.58
TRAPPC4-205ENST00000525079 ESCO1Q5FWF5 840 aa18.64■□□□□ 0.57
TRAPPC4-205ENST00000525079 POGKQ9P215 609 aa18.64■□□□□ 0.57
TRAPPC4-205ENST00000525079 NEUROD1Q13562 356 aa18.63■□□□□ 0.57
TRAPPC4-205ENST00000525079 RGS17Q9UGC6 210 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC4-205ENST00000525079 NUTM2BA6NNL0 878 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC4-205ENST00000525079 NUTM2EB1AL46 878 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC4-205ENST00000525079 NUTM2AQ8IVF1 878 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC4-205ENST00000525079 LRRC59Q96AG4 307 aaKnown RBP18.61■□□□□ 0.57
TRAPPC4-205ENST00000525079 SHPRHQ149N8 1683 aa18.6■□□□□ 0.57
TRAPPC4-205ENST00000525079 DLC1Q96QB1 1528 aa18.59■□□□□ 0.57
TRAPPC4-205ENST00000525079 SPATA31A6Q5VVP1 1343 aa18.59■□□□□ 0.57
TRAPPC4-205ENST00000525079 FMN2Q9NZ56 1722 aa18.59■□□□□ 0.57
TRAPPC4-205ENST00000525079 LRP6O75581 1613 aa18.59■□□□□ 0.57
TRAPPC4-205ENST00000525079 L3MBTL2Q969R5 705 aa18.58■□□□□ 0.56
TRAPPC4-205ENST00000525079 HIRIP3Q9BW71 556 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC4-205ENST00000525079 MINK1Q8N4C8 1332 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC4-205ENST00000525079 FOXO3O43524 673 aa18.57■□□□□ 0.56
TRAPPC4-205ENST00000525079 XPCQ01831 940 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC4-205ENST00000525079 NBPF1Q3BBV0 1214 aa18.57■□□□□ 0.56
TRAPPC4-205ENST00000525079 MEX3CQ5U5Q3 659 aaKnown RBP18.57■□□□□ 0.56
TRAPPC4-205ENST00000525079 RGPD8O14715 1765 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC4-205ENST00000525079 SOS2Q07890 1332 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC4-205ENST00000525079 SOCS7O14512 581 aa18.55■□□□□ 0.56
TRAPPC4-205ENST00000525079 PNPLA6Q8IY17 1366 aa18.55■□□□□ 0.56
TRAPPC4-205ENST00000525079 POTEAQ6S8J7 498 aa18.54■□□□□ 0.56
TRAPPC4-205ENST00000525079 NPHP3Q7Z494 1330 aa18.53■□□□□ 0.56
TRAPPC4-205ENST00000525079 ARHGEF28Q8N1W1 1705 aaKnown RBP18.52■□□□□ 0.56
TRAPPC4-205ENST00000525079 KIAA1210Q9ULL0 1709 aa18.52■□□□□ 0.56
TRAPPC4-205ENST00000525079 PHF8Q9UPP1 1060 aa18.5■□□□□ 0.55
TRAPPC4-205ENST00000525079 PXDNQ92626 1479 aa18.5■□□□□ 0.55
TRAPPC4-205ENST00000525079 PMFBP1Q8TBY8 1022 aa18.49■□□□□ 0.55
TRAPPC4-205ENST00000525079 ADGRB2O60241 1585 aa18.49■□□□□ 0.55
TRAPPC4-205ENST00000525079 USP32Q8NFA0 1604 aa18.49■□□□□ 0.55
TRAPPC4-205ENST00000525079 KIF1AQ12756 1690 aa18.48■□□□□ 0.55
TRAPPC4-205ENST00000525079 WASLO00401 505 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC4-205ENST00000525079 ADAMTS2O95450 1211 aa18.48■□□□□ 0.55
TRAPPC4-205ENST00000525079 KRT28Q7Z3Y7 464 aa18.48■□□□□ 0.55
TRAPPC4-205ENST00000525079 PRR36Q9H6K5 1346 aa18.47■□□□□ 0.55
TRAPPC4-205ENST00000525079 C8orf37Q96NL8 207 aa18.46■□□□□ 0.55
TRAPPC4-205ENST00000525079 ANKARQ7Z5J8 1434 aa18.45■□□□□ 0.54
TRAPPC4-205ENST00000525079 PSME1Q06323 249 aa18.44■□□□□ 0.54
TRAPPC4-205ENST00000525079 AFF2P51816 1311 aa18.44■□□□□ 0.54
TRAPPC4-205ENST00000525079 TRPM1Q7Z4N2 1603 aa18.43■□□□□ 0.54
TRAPPC4-205ENST00000525079 PLEKHG5O94827 1062 aa18.43■□□□□ 0.54
TRAPPC4-205ENST00000525079 NBPF8Q3BBV2 869 aa18.43■□□□□ 0.54
TRAPPC4-205ENST00000525079 ZNF772Q68DY9 489 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC4-205ENST00000525079 CDK19Q9BWU1 502 aa18.43■□□□□ 0.54
TRAPPC4-205ENST00000525079 SPATA31A3Q5VYP0 1347 aa18.43■□□□□ 0.54
TRAPPC4-205ENST00000525079 TULP4Q9NRJ4 1543 aa18.43■□□□□ 0.54
TRAPPC4-205ENST00000525079 COL22A1Q8NFW1 1626 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC4-205ENST00000525079 EIF3AQ14152 1382 aaKnown RBP18.42■□□□□ 0.54
TRAPPC4-205ENST00000525079 LMOD2Q6P5Q4 547 aa18.41■□□□□ 0.54
TRAPPC4-205ENST00000525079 NUDT16Q96DE0 195 aaKnown RBP18.41■□□□□ 0.54
TRAPPC4-205ENST00000525079 NGLY1Q96IV0 654 aa18.41■□□□□ 0.54
TRAPPC4-205ENST00000525079 CENPJQ9HC77 1338 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC4-205ENST00000525079 ROCK2O75116 1388 aaKnown RBP18.4■□□□□ 0.54
TRAPPC4-205ENST00000525079 TONSLQ96HA7 1378 aa18.4■□□□□ 0.54
TRAPPC4-205ENST00000525079 NGDNQ8NEJ9 315 aaKnown RBP18.39■□□□□ 0.53
TRAPPC4-205ENST00000525079 PCGF6Q9BYE7 350 aa18.39■□□□□ 0.53
TRAPPC4-205ENST00000525079 CABLES1Q8TDN4 633 aa18.37■□□□□ 0.53
TRAPPC4-205ENST00000525079 TNS3Q68CZ2 1445 aa18.37■□□□□ 0.53
TRAPPC4-205ENST00000525079 ATP7BP35670 1465 aa18.37■□□□□ 0.53
TRAPPC4-205ENST00000525079 QRICH2Q9H0J4 1663 aa18.37■□□□□ 0.53
TRAPPC4-205ENST00000525079 SBNO1A3KN83 1393 aa18.36■□□□□ 0.53
TRAPPC4-205ENST00000525079 GPRASP1Q5JY77 1395 aa18.36■□□□□ 0.53
TRAPPC4-205ENST00000525079 RXRBP28702 533 aa18.35■□□□□ 0.53
TRAPPC4-205ENST00000525079 SRPK2P78362 688 aaKnown RBP18.35■□□□□ 0.53
TRAPPC4-205ENST00000525079 QTRT2Q9H974 415 aaKnown RBP18.35■□□□□ 0.53
TRAPPC4-205ENST00000525079 CABP2Q9NPB3 220 aa18.35■□□□□ 0.53
TRAPPC4-205ENST00000525079 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
TRAPPC4-205ENST00000525079 HAP1P54257 671 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC4-205ENST00000525079 USP21Q9UK80 565 aa18.34■□□□□ 0.53
TRAPPC4-205ENST00000525079 TRPM3Q9HCF6 1732 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC4-205ENST00000525079 MARF1Q9Y4F3 1742 aaKnown RBP18.33■□□□□ 0.52
TRAPPC4-205ENST00000525079 PAK3O75914 559 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC4-205ENST00000525079 CCDC61Q9Y6R9 512 aa18.33■□□□□ 0.52
TRAPPC4-205ENST00000525079 ARHGEF10O15013 1369 aa18.31■□□□□ 0.52
TRAPPC4-205ENST00000525079 ACEP12821 1306 aa18.31■□□□□ 0.52
TRAPPC4-205ENST00000525079 FNBP4Q8N3X1 1017 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC4-205ENST00000525079 CARD11Q9BXL7 1154 aa18.31■□□□□ 0.52
TRAPPC4-205ENST00000525079 TOPAZ1Q8N9V7 1692 aa18.31■□□□□ 0.52
TRAPPC4-205ENST00000525079 PLEKHG3A1L390 1219 aa18.29■□□□□ 0.52
TRAPPC4-205ENST00000525079 ALS2Q96Q42 1657 aa18.28■□□□□ 0.52
TRAPPC4-205ENST00000525079 RBM6P78332 1123 aaKnown RBP18.28■□□□□ 0.52
TRAPPC4-205ENST00000525079 PPIP5K1Q6PFW1 1433 aa18.28■□□□□ 0.52
TRAPPC4-205ENST00000525079 RALGAPBQ86X10 1494 aa18.27■□□□□ 0.52
TRAPPC4-205ENST00000525079 EVC2Q86UK5 1308 aa18.27■□□□□ 0.52
TRAPPC4-205ENST00000525079 ABCA3Q99758 1704 aa18.27■□□□□ 0.52
TRAPPC4-205ENST00000525079 NUTM2GQ5VZR2 741 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms