RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 RGS17Q9UGC6 210 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC4-204ENST00000524797 LRP6O75581 1613 aa16.35■□□□□ 0.21
TRAPPC4-204ENST00000524797 DHX57Q6P158 1386 aaKnown RBP16.35■□□□□ 0.21
TRAPPC4-204ENST00000524797 ADGRB1O14514 1584 aa16.34■□□□□ 0.21
TRAPPC4-204ENST00000524797 SIRT1Q96EB6 747 aa16.34■□□□□ 0.21
TRAPPC4-204ENST00000524797 DLC1Q96QB1 1528 aa16.34■□□□□ 0.21
TRAPPC4-204ENST00000524797 SPATA31A6Q5VVP1 1343 aa16.34■□□□□ 0.21
TRAPPC4-204ENST00000524797 DDX17Q92841 729 aaKnown RBP16.33■□□□□ 0.21
TRAPPC4-204ENST00000524797 DCAF11Q8TEB1 546 aa16.33■□□□□ 0.2
TRAPPC4-204ENST00000524797 ORAI2Q96SN7 254 aa16.32■□□□□ 0.2
TRAPPC4-204ENST00000524797 KDM2AQ9Y2K7 1162 aa16.32■□□□□ 0.2
TRAPPC4-204ENST00000524797 RGPD8O14715 1765 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC4-204ENST00000524797 STAC3Q96MF2 364 aa16.31■□□□□ 0.2
TRAPPC4-204ENST00000524797 LRRC59Q96AG4 307 aaKnown RBP16.29■□□□□ 0.2
TRAPPC4-204ENST00000524797 PNPLA6Q8IY17 1366 aa16.29■□□□□ 0.2
TRAPPC4-204ENST00000524797 KIAA1210Q9ULL0 1709 aa16.29■□□□□ 0.2
TRAPPC4-204ENST00000524797 KIF1AQ12756 1690 aa16.28■□□□□ 0.2
TRAPPC4-204ENST00000524797 ADGRB2O60241 1585 aa16.27■□□□□ 0.2
TRAPPC4-204ENST00000524797 SOS2Q07890 1332 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC4-204ENST00000524797 ARHGEF28Q8N1W1 1705 aaKnown RBP16.27■□□□□ 0.19
TRAPPC4-204ENST00000524797 POTEAQ6S8J7 498 aa16.27■□□□□ 0.19
TRAPPC4-204ENST00000524797 COL22A1Q8NFW1 1626 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC4-204ENST00000524797 ESCO1Q5FWF5 840 aa16.26■□□□□ 0.19
TRAPPC4-204ENST00000524797 MEX3CQ5U5Q3 659 aaKnown RBP16.26■□□□□ 0.19
TRAPPC4-204ENST00000524797 PRAM1Q96QH2 718 aa16.26■□□□□ 0.19
TRAPPC4-204ENST00000524797 PXDNQ92626 1479 aa16.25■□□□□ 0.19
TRAPPC4-204ENST00000524797 NUTM2BA6NNL0 878 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC4-204ENST00000524797 NUTM2EB1AL46 878 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC4-204ENST00000524797 NUTM2AQ8IVF1 878 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC4-204ENST00000524797 NUTM2FA1L443 756 aa16.25■□□□□ 0.19
TRAPPC4-204ENST00000524797 POGKQ9P215 609 aa16.24■□□□□ 0.19
TRAPPC4-204ENST00000524797 USP32Q8NFA0 1604 aa16.24■□□□□ 0.19
TRAPPC4-204ENST00000524797 SAFB2Q14151 953 aaKnown RBP eCLIP16.23■□□□□ 0.19
TRAPPC4-204ENST00000524797 TRAK1Q9UPV9 953 aa16.23■□□□□ 0.19
TRAPPC4-204ENST00000524797 NPHP3Q7Z494 1330 aa16.23■□□□□ 0.19
TRAPPC4-204ENST00000524797 FOXO3O43524 673 aa16.2■□□□□ 0.18
TRAPPC4-204ENST00000524797 MARF1Q9Y4F3 1742 aaKnown RBP16.2■□□□□ 0.18
TRAPPC4-204ENST00000524797 ANKARQ7Z5J8 1434 aa16.2■□□□□ 0.18
TRAPPC4-204ENST00000524797 XPCQ01831 940 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC4-204ENST00000524797 MINK1Q8N4C8 1332 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC4-204ENST00000524797 ZNF772Q68DY9 489 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC4-204ENST00000524797 PHF8Q9UPP1 1060 aa16.17■□□□□ 0.18
TRAPPC4-204ENST00000524797 TULP4Q9NRJ4 1543 aa16.17■□□□□ 0.18
TRAPPC4-204ENST00000524797 AFF2P51816 1311 aa16.17■□□□□ 0.18
TRAPPC4-204ENST00000524797 SIN3AQ96ST3 1273 aa16.17■□□□□ 0.18
TRAPPC4-204ENST00000524797 HIRIP3Q9BW71 556 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC4-204ENST00000524797 ITSN1Q15811 1721 aa16.16■□□□□ 0.18
TRAPPC4-204ENST00000524797 EIF3AQ14152 1382 aaKnown RBP16.15■□□□□ 0.18
TRAPPC4-204ENST00000524797 C8orf37Q96NL8 207 aa16.15■□□□□ 0.18
TRAPPC4-204ENST00000524797 TRPM1Q7Z4N2 1603 aa16.15■□□□□ 0.18
TRAPPC4-204ENST00000524797 ADAMTS2O95450 1211 aa16.14■□□□□ 0.17
TRAPPC4-204ENST00000524797 NBPF1Q3BBV0 1214 aa16.14■□□□□ 0.17
TRAPPC4-204ENST00000524797 KRT28Q7Z3Y7 464 aa16.14■□□□□ 0.17
TRAPPC4-204ENST00000524797 L3MBTL2Q969R5 705 aa16.14■□□□□ 0.17
TRAPPC4-204ENST00000524797 TRPM3Q9HCF6 1732 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC4-204ENST00000524797 WASLO00401 505 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC4-204ENST00000524797 SPATA31A3Q5VYP0 1347 aa16.13■□□□□ 0.17
TRAPPC4-204ENST00000524797 PRR36Q9H6K5 1346 aa16.13■□□□□ 0.17
TRAPPC4-204ENST00000524797 TRIM26Q12899 539 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC4-204ENST00000524797 ABCA3Q99758 1704 aa16.13■□□□□ 0.17
TRAPPC4-204ENST00000524797 NEUROD1Q13562 356 aa16.12■□□□□ 0.17
TRAPPC4-204ENST00000524797 TNS3Q68CZ2 1445 aa16.12■□□□□ 0.17
TRAPPC4-204ENST00000524797 TOPAZ1Q8N9V7 1692 aa16.11■□□□□ 0.17
TRAPPC4-204ENST00000524797 QRICH2Q9H0J4 1663 aa16.11■□□□□ 0.17
TRAPPC4-204ENST00000524797 SBNO1A3KN83 1393 aa16.11■□□□□ 0.17
TRAPPC4-204ENST00000524797 PSME1Q06323 249 aa16.11■□□□□ 0.17
TRAPPC4-204ENST00000524797 PMFBP1Q8TBY8 1022 aa16.1■□□□□ 0.17
TRAPPC4-204ENST00000524797 NGLY1Q96IV0 654 aa16.1■□□□□ 0.17
TRAPPC4-204ENST00000524797 ATP7BP35670 1465 aa16.1■□□□□ 0.17
TRAPPC4-204ENST00000524797 ALS2Q96Q42 1657 aa16.1■□□□□ 0.17
TRAPPC4-204ENST00000524797 CDK12Q9NYV4 1490 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC4-204ENST00000524797 RXRBP28702 533 aa16.08■□□□□ 0.16
TRAPPC4-204ENST00000524797 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.07■□□□□ 0.16
TRAPPC4-204ENST00000524797 QTRT2Q9H974 415 aaKnown RBP16.07■□□□□ 0.16
TRAPPC4-204ENST00000524797 FNBP4Q8N3X1 1017 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC4-204ENST00000524797 NUDT16Q96DE0 195 aaKnown RBP16.06■□□□□ 0.16
TRAPPC4-204ENST00000524797 CDK19Q9BWU1 502 aa16.06■□□□□ 0.16
TRAPPC4-204ENST00000524797 ARHGEF10O15013 1369 aa16.06■□□□□ 0.16
TRAPPC4-204ENST00000524797 USP21Q9UK80 565 aa16.06■□□□□ 0.16
TRAPPC4-204ENST00000524797 CENPJQ9HC77 1338 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-204ENST00000524797 CRYBG1Q9Y4K1 1723 aa16.05■□□□□ 0.16
TRAPPC4-204ENST00000524797 GPRASP1Q5JY77 1395 aa16.05■□□□□ 0.16
TRAPPC4-204ENST00000524797 ATRNO75882 1429 aa16.05■□□□□ 0.16
TRAPPC4-204ENST00000524797 PLCH1Q4KWH8 1693 aa16.04■□□□□ 0.16
TRAPPC4-204ENST00000524797 RBM6P78332 1123 aaKnown RBP16.04■□□□□ 0.16
TRAPPC4-204ENST00000524797 BCL9LQ86UU0 1499 aa16.03■□□□□ 0.16
TRAPPC4-204ENST00000524797 RGS12O14924 1447 aa16.03■□□□□ 0.16
TRAPPC4-204ENST00000524797 NGDNQ8NEJ9 315 aaKnown RBP16.03■□□□□ 0.16
TRAPPC4-204ENST00000524797 NWD2Q9ULI1 1742 aa16.02■□□□□ 0.16
TRAPPC4-204ENST00000524797 LMOD2Q6P5Q4 547 aa16.02■□□□□ 0.16
TRAPPC4-204ENST00000524797 TRPC5Q9UL62 973 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC4-204ENST00000524797 ROCK2O75116 1388 aaKnown RBP16.02■□□□□ 0.15
TRAPPC4-204ENST00000524797 NBPF8Q3BBV2 869 aa16.02■□□□□ 0.15
TRAPPC4-204ENST00000524797 CABLES1Q8TDN4 633 aa16.02■□□□□ 0.15
TRAPPC4-204ENST00000524797 SLIT2O94813 1529 aa16.01■□□□□ 0.15
TRAPPC4-204ENST00000524797 PLEKHG5O94827 1062 aa16■□□□□ 0.15
TRAPPC4-204ENST00000524797 POLR3AO14802 1390 aaPredicted RBP16■□□□□ 0.15
TRAPPC4-204ENST00000524797 HAP1P54257 671 aaPredicted RBP16■□□□□ 0.15
TRAPPC4-204ENST00000524797 TONSLQ96HA7 1378 aa15.99■□□□□ 0.15
TRAPPC4-204ENST00000524797 PLEKHG3A1L390 1219 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms