RNA–Protein interactions for RNA: ENST00000524334.1

HDAC2-217, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-217ENST00000524334 LRRC59Q96AG4 307 aaKnown RBP18.46■□□□□ 0.55
HDAC2-217ENST00000524334 ADGRB1O14514 1584 aa18.46■□□□□ 0.55
HDAC2-217ENST00000524334 ESCO1Q5FWF5 840 aa18.45■□□□□ 0.54
HDAC2-217ENST00000524334 NALCNQ8IZF0 1738 aa18.45■□□□□ 0.54
HDAC2-217ENST00000524334 DLC1Q96QB1 1528 aa18.44■□□□□ 0.54
HDAC2-217ENST00000524334 SAFB2Q14151 953 aaKnown RBP eCLIP18.44■□□□□ 0.54
HDAC2-217ENST00000524334 AHDC1Q5TGY3 1603 aaPredicted RBP18.43■□□□□ 0.54
HDAC2-217ENST00000524334 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
HDAC2-217ENST00000524334 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
HDAC2-217ENST00000524334 KNDC1Q76NI1 1749 aa18.42■□□□□ 0.54
HDAC2-217ENST00000524334 SPATA31A6Q5VVP1 1343 aa18.42■□□□□ 0.54
HDAC2-217ENST00000524334 NUTM2FA1L443 756 aa18.41■□□□□ 0.54
HDAC2-217ENST00000524334 MED1Q15648 1581 aaPredicted RBP18.4■□□□□ 0.54
HDAC2-217ENST00000524334 NBPF1Q3BBV0 1214 aa18.4■□□□□ 0.54
HDAC2-217ENST00000524334 DDX17Q92841 729 aaKnown RBP18.4■□□□□ 0.54
HDAC2-217ENST00000524334 NPHP3Q7Z494 1330 aa18.4■□□□□ 0.54
HDAC2-217ENST00000524334 PHLPP1O60346 1717 aa18.4■□□□□ 0.54
HDAC2-217ENST00000524334 SOS2Q07890 1332 aaPredicted RBP18.39■□□□□ 0.53
HDAC2-217ENST00000524334 COL16A1Q07092 1604 aaPredicted RBP18.38■□□□□ 0.53
HDAC2-217ENST00000524334 FOXO3O43524 673 aa18.38■□□□□ 0.53
HDAC2-217ENST00000524334 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
HDAC2-217ENST00000524334 MINK1Q8N4C8 1332 aaPredicted RBP18.37■□□□□ 0.53
HDAC2-217ENST00000524334 WASLO00401 505 aaPredicted RBP18.36■□□□□ 0.53
HDAC2-217ENST00000524334 EIF3AQ14152 1382 aaKnown RBP18.36■□□□□ 0.53
HDAC2-217ENST00000524334 TONSLQ96HA7 1378 aa18.36■□□□□ 0.53
HDAC2-217ENST00000524334 HIRIP3Q9BW71 556 aaPredicted RBP18.36■□□□□ 0.53
HDAC2-217ENST00000524334 PHF8Q9UPP1 1060 aa18.35■□□□□ 0.53
HDAC2-217ENST00000524334 ILDR2Q71H61 639 aa18.33■□□□□ 0.52
HDAC2-217ENST00000524334 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
HDAC2-217ENST00000524334 KIAA1210Q9ULL0 1709 aa18.32■□□□□ 0.52
HDAC2-217ENST00000524334 PSME1Q06323 249 aa18.32■□□□□ 0.52
HDAC2-217ENST00000524334 MEX3CQ5U5Q3 659 aaKnown RBP18.32■□□□□ 0.52
HDAC2-217ENST00000524334 NHSL1Q5SYE7 1610 aa18.31■□□□□ 0.52
HDAC2-217ENST00000524334 NUTM2BA6NNL0 878 aaPredicted RBP18.31■□□□□ 0.52
HDAC2-217ENST00000524334 NUTM2EB1AL46 878 aaPredicted RBP18.31■□□□□ 0.52
HDAC2-217ENST00000524334 KRT28Q7Z3Y7 464 aa18.31■□□□□ 0.52
HDAC2-217ENST00000524334 NUTM2AQ8IVF1 878 aaPredicted RBP18.31■□□□□ 0.52
HDAC2-217ENST00000524334 ROCK2O75116 1388 aaKnown RBP18.3■□□□□ 0.52
HDAC2-217ENST00000524334 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
HDAC2-217ENST00000524334 CENPJQ9HC77 1338 aaPredicted RBP18.3■□□□□ 0.52
HDAC2-217ENST00000524334 CLSPNQ9HAW4 1339 aa18.29■□□□□ 0.52
HDAC2-217ENST00000524334 NBPF8Q3BBV2 869 aa18.29■□□□□ 0.52
HDAC2-217ENST00000524334 CDK19Q9BWU1 502 aa18.29■□□□□ 0.52
HDAC2-217ENST00000524334 RGS17Q9UGC6 210 aaPredicted RBP18.29■□□□□ 0.52
HDAC2-217ENST00000524334 ADGRB2O60241 1585 aa18.29■□□□□ 0.52
HDAC2-217ENST00000524334 XPCQ01831 940 aaPredicted RBP18.28■□□□□ 0.52
HDAC2-217ENST00000524334 FMN2Q9NZ56 1722 aa18.28■□□□□ 0.52
HDAC2-217ENST00000524334 PMFBP1Q8TBY8 1022 aa18.27■□□□□ 0.52
HDAC2-217ENST00000524334 NUDT16Q96DE0 195 aaKnown RBP18.27■□□□□ 0.52
HDAC2-217ENST00000524334 TIMELESSQ9UNS1 1208 aa18.27■□□□□ 0.52
HDAC2-217ENST00000524334 PXDNQ92626 1479 aa18.26■□□□□ 0.51
HDAC2-217ENST00000524334 SHPRHQ149N8 1683 aa18.26■□□□□ 0.51
HDAC2-217ENST00000524334 SPATA31A3Q5VYP0 1347 aa18.25■□□□□ 0.51
HDAC2-217ENST00000524334 PRR36Q9H6K5 1346 aa18.25■□□□□ 0.51
HDAC2-217ENST00000524334 ZNF772Q68DY9 489 aaPredicted RBP18.25■□□□□ 0.51
HDAC2-217ENST00000524334 CCDC61Q9Y6R9 512 aa18.25■□□□□ 0.51
HDAC2-217ENST00000524334 TULP4Q9NRJ4 1543 aa18.24■□□□□ 0.51
HDAC2-217ENST00000524334 LRP6O75581 1613 aa18.24■□□□□ 0.51
HDAC2-217ENST00000524334 NGDNQ8NEJ9 315 aaKnown RBP18.24■□□□□ 0.51
HDAC2-217ENST00000524334 CARD11Q9BXL7 1154 aa18.24■□□□□ 0.51
HDAC2-217ENST00000524334 GPRASP1Q5JY77 1395 aa18.24■□□□□ 0.51
HDAC2-217ENST00000524334 SRPK2P78362 688 aaKnown RBP18.23■□□□□ 0.51
HDAC2-217ENST00000524334 KIF1AQ12756 1690 aa18.22■□□□□ 0.51
HDAC2-217ENST00000524334 SBNO1A3KN83 1393 aa18.22■□□□□ 0.51
HDAC2-217ENST00000524334 ARHGEF28Q8N1W1 1705 aaKnown RBP18.21■□□□□ 0.51
HDAC2-217ENST00000524334 ADAMTS2O95450 1211 aa18.21■□□□□ 0.51
HDAC2-217ENST00000524334 POTEAQ6S8J7 498 aa18.21■□□□□ 0.51
HDAC2-217ENST00000524334 EVC2Q86UK5 1308 aa18.21■□□□□ 0.51
HDAC2-217ENST00000524334 PLEKHG3A1L390 1219 aa18.2■□□□□ 0.5
HDAC2-217ENST00000524334 SOCS7O14512 581 aa18.2■□□□□ 0.5
HDAC2-217ENST00000524334 NGLY1Q96IV0 654 aa18.2■□□□□ 0.5
HDAC2-217ENST00000524334 C8orf37Q96NL8 207 aa18.2■□□□□ 0.5
HDAC2-217ENST00000524334 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
HDAC2-217ENST00000524334 LMOD2Q6P5Q4 547 aa18.19■□□□□ 0.5
HDAC2-217ENST00000524334 CCER1Q8TC90 406 aaPredicted RBP18.19■□□□□ 0.5
HDAC2-217ENST00000524334 ARHGEF10O15013 1369 aa18.18■□□□□ 0.5
HDAC2-217ENST00000524334 CABP2Q9NPB3 220 aa18.18■□□□□ 0.5
HDAC2-217ENST00000524334 AFF2P51816 1311 aa18.18■□□□□ 0.5
HDAC2-217ENST00000524334 TNS3Q68CZ2 1445 aa18.17■□□□□ 0.5
HDAC2-217ENST00000524334 USP32Q8NFA0 1604 aa18.17■□□□□ 0.5
HDAC2-217ENST00000524334 ATP7BP35670 1465 aa18.17■□□□□ 0.5
HDAC2-217ENST00000524334 RALGAPBQ86X10 1494 aa18.16■□□□□ 0.5
HDAC2-217ENST00000524334 HAP1P54257 671 aaPredicted RBP18.16■□□□□ 0.5
HDAC2-217ENST00000524334 ACEP12821 1306 aa18.16■□□□□ 0.5
HDAC2-217ENST00000524334 SLC24A1O60721 1099 aa18.15■□□□□ 0.5
HDAC2-217ENST00000524334 PAK3O75914 559 aaPredicted RBP18.15■□□□□ 0.5
HDAC2-217ENST00000524334 POLR3AO14802 1390 aaPredicted RBP18.15■□□□□ 0.5
HDAC2-217ENST00000524334 FNBP4Q8N3X1 1017 aaPredicted RBP18.14■□□□□ 0.49
HDAC2-217ENST00000524334 COL22A1Q8NFW1 1626 aaPredicted RBP18.13■□□□□ 0.49
HDAC2-217ENST00000524334 CABP1Q9NZU7 370 aa18.13■□□□□ 0.49
HDAC2-217ENST00000524334 SBNO2Q9Y2G9 1366 aa18.13■□□□□ 0.49
HDAC2-217ENST00000524334 RXRBP28702 533 aa18.12■□□□□ 0.49
HDAC2-217ENST00000524334 QTRT2Q9H974 415 aaKnown RBP18.12■□□□□ 0.49
HDAC2-217ENST00000524334 CABLES1Q8TDN4 633 aa18.11■□□□□ 0.49
HDAC2-217ENST00000524334 USP21Q9UK80 565 aa18.11■□□□□ 0.49
HDAC2-217ENST00000524334 PPIP5K1Q6PFW1 1433 aa18.11■□□□□ 0.49
HDAC2-217ENST00000524334 BRD4O60885 1362 aaPredicted RBP18.09■□□□□ 0.49
HDAC2-217ENST00000524334 ZNF692Q9BU19 519 aaPredicted RBP18.09■□□□□ 0.49
HDAC2-217ENST00000524334 RGPD8O14715 1765 aaPredicted RBP18.09■□□□□ 0.49
HDAC2-217ENST00000524334 ATAD2Q6PL18 1390 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms