RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-222	ENST00000523555	TRIM26	Q12899	539 aa	Predicted RBP	13.91	□□□□□ -0.18
PABPC1-222	ENST00000523555	ILDR2	Q71H61	639 aa		13.91	□□□□□ -0.18
PABPC1-222	ENST00000523555	DDX17	Q92841	729 aa	Known RBP	13.91	□□□□□ -0.18
PABPC1-222	ENST00000523555	SIN3A	Q96ST3	1273 aa		13.91	□□□□□ -0.18
PABPC1-222	ENST00000523555	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.9	□□□□□ -0.18
PABPC1-222	ENST00000523555	SHPRH	Q149N8	1683 aa		13.89	□□□□□ -0.19
PABPC1-222	ENST00000523555	KIAA1210	Q9ULL0	1709 aa		13.89	□□□□□ -0.19
PABPC1-222	ENST00000523555	ORAI2	Q96SN7	254 aa		13.88	□□□□□ -0.19
PABPC1-222	ENST00000523555	DLC1	Q96QB1	1528 aa		13.88	□□□□□ -0.19
PABPC1-222	ENST00000523555	NUTM2F	A1L443	756 aa		13.86	□□□□□ -0.19
PABPC1-222	ENST00000523555	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
PABPC1-222	ENST00000523555	TRAK1	Q9UPV9	953 aa		13.86	□□□□□ -0.19
PABPC1-222	ENST00000523555	LRP6	O75581	1613 aa		13.86	□□□□□ -0.19
PABPC1-222	ENST00000523555	USP32	Q8NFA0	1604 aa		13.86	□□□□□ -0.19
PABPC1-222	ENST00000523555	PRAM1	Q96QH2	718 aa		13.85	□□□□□ -0.19
PABPC1-222	ENST00000523555	JCAD	Q9P266	1359 aa		13.84	□□□□□ -0.19
PABPC1-222	ENST00000523555	ADGRB2	O60241	1585 aa		13.84	□□□□□ -0.19
PABPC1-222	ENST00000523555	NEUROD1	Q13562	356 aa		13.84	□□□□□ -0.19
PABPC1-222	ENST00000523555	SIRT1	Q96EB6	747 aa		13.84	□□□□□ -0.19
PABPC1-222	ENST00000523555	TRPM1	Q7Z4N2	1603 aa		13.83	□□□□□ -0.2
PABPC1-222	ENST00000523555	NBPF1	Q3BBV0	1214 aa		13.83	□□□□□ -0.2
PABPC1-222	ENST00000523555	L3MBTL2	Q969R5	705 aa		13.83	□□□□□ -0.2
PABPC1-222	ENST00000523555	STAC3	Q96MF2	364 aa		13.82	□□□□□ -0.2
PABPC1-222	ENST00000523555	RGS17	Q9UGC6	210 aa	Predicted RBP	13.82	□□□□□ -0.2
PABPC1-222	ENST00000523555	KIF1A	Q12756	1690 aa		13.8	□□□□□ -0.2
PABPC1-222	ENST00000523555	ESCO1	Q5FWF5	840 aa		13.8	□□□□□ -0.2
PABPC1-222	ENST00000523555	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.8	□□□□□ -0.2
PABPC1-222	ENST00000523555	PXDN	Q92626	1479 aa		13.8	□□□□□ -0.2
PABPC1-222	ENST00000523555	PHF23	Q9BUL5	403 aa	Predicted RBP	13.79	□□□□□ -0.2
PABPC1-222	ENST00000523555	POGK	Q9P215	609 aa		13.79	□□□□□ -0.2
PABPC1-222	ENST00000523555	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.79	□□□□□ -0.2
PABPC1-222	ENST00000523555	PNPLA6	Q8IY17	1366 aa		13.79	□□□□□ -0.2
PABPC1-222	ENST00000523555	XPC	Q01831	940 aa	Predicted RBP	13.78	□□□□□ -0.2
PABPC1-222	ENST00000523555	SOS2	Q07890	1332 aa	Predicted RBP	13.78	□□□□□ -0.2
PABPC1-222	ENST00000523555	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.77	□□□□□ -0.21
PABPC1-222	ENST00000523555	QRICH2	Q9H0J4	1663 aa		13.77	□□□□□ -0.21
PABPC1-222	ENST00000523555	SPATA31A6	Q5VVP1	1343 aa		13.76	□□□□□ -0.21
PABPC1-222	ENST00000523555	PRR36	Q9H6K5	1346 aa		13.76	□□□□□ -0.21
PABPC1-222	ENST00000523555	FOXO3	O43524	673 aa		13.76	□□□□□ -0.21
PABPC1-222	ENST00000523555	TULP4	Q9NRJ4	1543 aa		13.75	□□□□□ -0.21
PABPC1-222	ENST00000523555	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.75	□□□□□ -0.21
PABPC1-222	ENST00000523555	NUTM2E	B1AL46	878 aa	Predicted RBP	13.75	□□□□□ -0.21
PABPC1-222	ENST00000523555	NBPF8	Q3BBV2	869 aa		13.75	□□□□□ -0.21
PABPC1-222	ENST00000523555	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.75	□□□□□ -0.21
PABPC1-222	ENST00000523555	LRRC59	Q96AG4	307 aa	Known RBP	13.75	□□□□□ -0.21
PABPC1-222	ENST00000523555	POTEA	Q6S8J7	498 aa		13.74	□□□□□ -0.21
PABPC1-222	ENST00000523555	TOPAZ1	Q8N9V7	1692 aa		13.74	□□□□□ -0.21
PABPC1-222	ENST00000523555	ITSN1	Q15811	1721 aa		13.73	□□□□□ -0.21
PABPC1-222	ENST00000523555	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.73	□□□□□ -0.21
PABPC1-222	ENST00000523555	MARF1	Q9Y4F3	1742 aa	Known RBP	13.73	□□□□□ -0.21
PABPC1-222	ENST00000523555	NPHP3	Q7Z494	1330 aa		13.73	□□□□□ -0.21
PABPC1-222	ENST00000523555	ATP7B	P35670	1465 aa		13.73	□□□□□ -0.21
PABPC1-222	ENST00000523555	ANKAR	Q7Z5J8	1434 aa		13.73	□□□□□ -0.21
PABPC1-222	ENST00000523555	WASL	O00401	505 aa	Predicted RBP	13.72	□□□□□ -0.21
PABPC1-222	ENST00000523555	PMFBP1	Q8TBY8	1022 aa		13.72	□□□□□ -0.21
PABPC1-222	ENST00000523555	PCGF6	Q9BYE7	350 aa		13.72	□□□□□ -0.21
PABPC1-222	ENST00000523555	PHF8	Q9UPP1	1060 aa		13.72	□□□□□ -0.21
PABPC1-222	ENST00000523555	ABCA3	Q99758	1704 aa		13.72	□□□□□ -0.21
PABPC1-222	ENST00000523555	ALS2	Q96Q42	1657 aa		13.69	□□□□□ -0.22
PABPC1-222	ENST00000523555	MEX3C	Q5U5Q3	659 aa	Known RBP	13.69	□□□□□ -0.22
PABPC1-222	ENST00000523555	KRT28	Q7Z3Y7	464 aa		13.69	□□□□□ -0.22
PABPC1-222	ENST00000523555	ROCK2	O75116	1388 aa	Known RBP	13.69	□□□□□ -0.22
PABPC1-222	ENST00000523555	TONSL	Q96HA7	1378 aa		13.69	□□□□□ -0.22
PABPC1-222	ENST00000523555	CDK19	Q9BWU1	502 aa		13.68	□□□□□ -0.22
PABPC1-222	ENST00000523555	CRYBG1	Q9Y4K1	1723 aa		13.67	□□□□□ -0.22
PABPC1-222	ENST00000523555	SPATA31A3	Q5VYP0	1347 aa		13.67	□□□□□ -0.22
PABPC1-222	ENST00000523555	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.67	□□□□□ -0.22
PABPC1-222	ENST00000523555	ADAMTS2	O95450	1211 aa		13.67	□□□□□ -0.22
PABPC1-222	ENST00000523555	GPRASP1	Q5JY77	1395 aa		13.67	□□□□□ -0.22
PABPC1-222	ENST00000523555	RALGAPB	Q86X10	1494 aa		13.67	□□□□□ -0.22
PABPC1-222	ENST00000523555	TNS3	Q68CZ2	1445 aa		13.66	□□□□□ -0.22
PABPC1-222	ENST00000523555	SOCS7	O14512	581 aa		13.66	□□□□□ -0.22
PABPC1-222	ENST00000523555	NUDT16	Q96DE0	195 aa	Known RBP	13.66	□□□□□ -0.22
PABPC1-222	ENST00000523555	C8orf37	Q96NL8	207 aa		13.66	□□□□□ -0.22
PABPC1-222	ENST00000523555	AFF2	P51816	1311 aa		13.65	□□□□□ -0.22
PABPC1-222	ENST00000523555	EIF3A	Q14152	1382 aa	Known RBP	13.65	□□□□□ -0.22
PABPC1-222	ENST00000523555	PLEKHG5	O94827	1062 aa		13.64	□□□□□ -0.23
PABPC1-222	ENST00000523555	SBNO1	A3KN83	1393 aa		13.63	□□□□□ -0.23
PABPC1-222	ENST00000523555	PSME1	Q06323	249 aa		13.63	□□□□□ -0.23
PABPC1-222	ENST00000523555	CABLES1	Q8TDN4	633 aa		13.63	□□□□□ -0.23
PABPC1-222	ENST00000523555	CABP2	Q9NPB3	220 aa		13.63	□□□□□ -0.23
PABPC1-222	ENST00000523555	PLCH1	Q4KWH8	1693 aa		13.62	□□□□□ -0.23
PABPC1-222	ENST00000523555	PPIP5K1	Q6PFW1	1433 aa		13.61	□□□□□ -0.23
PABPC1-222	ENST00000523555	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.61	□□□□□ -0.23
PABPC1-222	ENST00000523555	POLR3A	O14802	1390 aa	Predicted RBP	13.6	□□□□□ -0.23
PABPC1-222	ENST00000523555	SRPK2	P78362	688 aa	Known RBP	13.6	□□□□□ -0.23
PABPC1-222	ENST00000523555	ZNF772	Q68DY9	489 aa	Predicted RBP	13.6	□□□□□ -0.23
PABPC1-222	ENST00000523555	LMOD2	Q6P5Q4	547 aa		13.6	□□□□□ -0.23
PABPC1-222	ENST00000523555	NGDN	Q8NEJ9	315 aa	Known RBP	13.6	□□□□□ -0.23
PABPC1-222	ENST00000523555	CARD11	Q9BXL7	1154 aa		13.6	□□□□□ -0.23
PABPC1-222	ENST00000523555	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.6	□□□□□ -0.23
PABPC1-222	ENST00000523555	AKAP12	Q02952	1782 aa		13.6	□□□□□ -0.23
PABPC1-222	ENST00000523555	ACE	P12821	1306 aa		13.6	□□□□□ -0.23
PABPC1-222	ENST00000523555	NGLY1	Q96IV0	654 aa		13.59	□□□□□ -0.23
PABPC1-222	ENST00000523555	CCDC61	Q9Y6R9	512 aa		13.59	□□□□□ -0.23
PABPC1-222	ENST00000523555	PLEKHG3	A1L390	1219 aa		13.58	□□□□□ -0.24
PABPC1-222	ENST00000523555	BCL9L	Q86UU0	1499 aa		13.58	□□□□□ -0.24
PABPC1-222	ENST00000523555	ARHGEF10	O15013	1369 aa		13.58	□□□□□ -0.24
PABPC1-222	ENST00000523555	NRAP	Q86VF7	1730 aa		13.57	□□□□□ -0.24
PABPC1-222	ENST00000523555	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.57	□□□□□ -0.24

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