RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 DACH1Q9UI36 760 aa10.39□□□□□ -0.75
PCM1-219ENST00000523540 BRPF1P55201 1214 aaPredicted RBP10.38□□□□□ -0.75
PCM1-219ENST00000523540 RSPH4AQ5TD94 716 aa10.38□□□□□ -0.75
PCM1-219ENST00000523540 PDE4DQ08499 809 aa10.37□□□□□ -0.75
PCM1-219ENST00000523540 FAM160A2Q8N612 972 aaPredicted RBP10.36□□□□□ -0.75
PCM1-219ENST00000523540 FCF1Q9Y324 198 aaKnown RBP10.36□□□□□ -0.75
PCM1-219ENST00000523540 SMCPP49901 116 aaPredicted RBP10.35□□□□□ -0.75
PCM1-219ENST00000523540 FUT2Q10981 343 aa10.34□□□□□ -0.75
PCM1-219ENST00000523540 CTC1Q2NKJ3 1217 aa10.34□□□□□ -0.75
PCM1-219ENST00000523540 CD2BP2O95400 341 aaKnown RBP10.33□□□□□ -0.76
PCM1-219ENST00000523540 NEUROD2Q15784 382 aa10.33□□□□□ -0.76
PCM1-219ENST00000523540 GMPR2Q9P2T1 348 aaKnown RBP10.33□□□□□ -0.76
PCM1-219ENST00000523540 SALL2Q9Y467 1007 aaPredicted RBP10.33□□□□□ -0.76
PCM1-219ENST00000523540 ATP6V1AP38606 617 aa10.32□□□□□ -0.76
PCM1-219ENST00000523540 GPBP1L1Q9HC44 474 aaPredicted RBP10.32□□□□□ -0.76
PCM1-219ENST00000523540 FAM217BQ9NTX9 383 aaPredicted RBP10.32□□□□□ -0.76
PCM1-219ENST00000523540 SLC27A5Q9Y2P5 690 aa10.32□□□□□ -0.76
PCM1-219ENST00000523540 AXIN1O15169 862 aa10.31□□□□□ -0.76
PCM1-219ENST00000523540 FMNL1O95466 1100 aaPredicted RBP10.31□□□□□ -0.76
PCM1-219ENST00000523540 MDM2Q00987 491 aaPredicted RBP10.31□□□□□ -0.76
PCM1-219ENST00000523540 PARP9Q8IXQ6 854 aa10.31□□□□□ -0.76
PCM1-219ENST00000523540 CYP4X1Q8N118 509 aa10.31□□□□□ -0.76
PCM1-219ENST00000523540 REPIN1Q9BWE0 567 aaKnown RBP10.31□□□□□ -0.76
PCM1-219ENST00000523540 CD46P15529 392 aa10.3□□□□□ -0.76
PCM1-219ENST00000523540 GCGRP47871 477 aa10.3□□□□□ -0.76
PCM1-219ENST00000523540 BRICD5Q6PL45 260 aa10.3□□□□□ -0.76
PCM1-219ENST00000523540 RDH13Q8NBN7 331 aa10.3□□□□□ -0.76
PCM1-219ENST00000523540 NLRP7Q8WX94 980 aa10.3□□□□□ -0.76
PCM1-219ENST00000523540 PRDM9Q9NQV7 894 aa10.3□□□□□ -0.76
PCM1-219ENST00000523540 WFS1O76024 890 aa10.29□□□□□ -0.76
PCM1-219ENST00000523540 NFX1Q12986 1120 aaKnown RBP10.29□□□□□ -0.76
PCM1-219ENST00000523540 TTLL12Q14166 644 aaPredicted RBP10.29□□□□□ -0.76
PCM1-219ENST00000523540 MSS51Q4VC12 460 aa10.29□□□□□ -0.76
PCM1-219ENST00000523540 GIGYF2Q6Y7W6 1299 aaKnown RBP10.28□□□□□ -0.76
PCM1-219ENST00000523540 KDM4CQ9H3R0 1056 aa10.28□□□□□ -0.76
PCM1-219ENST00000523540 DDX11L8A8MPP1 907 aa10.27□□□□□ -0.77
PCM1-219ENST00000523540 C11orf95C9JLR9 678 aaPredicted RBP10.27□□□□□ -0.77
PCM1-219ENST00000523540 WIPF1O43516 503 aa10.26□□□□□ -0.77
PCM1-219ENST00000523540 USP46P62068 366 aa10.25□□□□□ -0.77
PCM1-219ENST00000523540 WNT7AO00755 349 aa10.24□□□□□ -0.77
PCM1-219ENST00000523540 SMPD1P17405 629 aa10.24□□□□□ -0.77
PCM1-219ENST00000523540 DIXDC1Q155Q3 683 aa10.24□□□□□ -0.77
PCM1-219ENST00000523540 RNF19BQ6ZMZ0 732 aa10.24□□□□□ -0.77
PCM1-219ENST00000523540 SSTR3P32745 418 aaPredicted RBP10.23□□□□□ -0.77
PCM1-219ENST00000523540 TTC24A2A3L6 582 aaPredicted RBP10.22□□□□□ -0.77
PCM1-219ENST00000523540 MS4A1P11836 297 aa10.22□□□□□ -0.77
PCM1-219ENST00000523540 LCE2CQ5TA81 110 aa10.22□□□□□ -0.77
PCM1-219ENST00000523540 ZBTB24O43167 697 aaPredicted RBP10.21□□□□□ -0.77
PCM1-219ENST00000523540 MMP16P51512 607 aa10.21□□□□□ -0.77
PCM1-219ENST00000523540 GRIPAP1Q4V328 841 aa10.21□□□□□ -0.77
PCM1-219ENST00000523540 SNIP1Q8TAD8 396 aaKnown RBP10.21□□□□□ -0.77
PCM1-219ENST00000523540 GJA5P36382 358 aa10.2□□□□□ -0.78
PCM1-219ENST00000523540 FAM117AQ9C073 453 aa10.2□□□□□ -0.78
PCM1-219ENST00000523540 ATP13A2Q9NQ11 1180 aa10.2□□□□□ -0.78
PCM1-219ENST00000523540 STK17AQ9UEE5 414 aa10.2□□□□□ -0.78
PCM1-219ENST00000523540 TRIM32Q13049 653 aa10.19□□□□□ -0.78
PCM1-219ENST00000523540 DDRGK1Q96HY6 314 aa10.19□□□□□ -0.78
PCM1-219ENST00000523540 KDM4AO75164 1064 aa10.17□□□□□ -0.78
PCM1-219ENST00000523540 SNRPBP14678 240 aaKnown RBP10.17□□□□□ -0.78
PCM1-219ENST00000523540 MRGPRX2Q96LB1 330 aa10.17□□□□□ -0.78
PCM1-219ENST00000523540 TRIM47Q96LD4 638 aa10.17□□□□□ -0.78
PCM1-219ENST00000523540 PLEKHG3A1L390 1219 aa10.16□□□□□ -0.78
PCM1-219ENST00000523540 J3QL48 77 aa10.16□□□□□ -0.78
PCM1-219ENST00000523540 IL27Q8NEV9 243 aa10.16□□□□□ -0.78
PCM1-219ENST00000523540 INSM1Q01101 510 aaPredicted RBP10.15□□□□□ -0.78
PCM1-219ENST00000523540 TMEM132AQ24JP5 1023 aa10.15□□□□□ -0.78
PCM1-219ENST00000523540 Q3C1V9 767 aa10.15□□□□□ -0.78
PCM1-219ENST00000523540 BEGAINQ9BUH8 593 aa10.15□□□□□ -0.78
PCM1-219ENST00000523540 TERTO14746 1132 aaKnown RBP10.14□□□□□ -0.79
PCM1-219ENST00000523540 DXOO77932 396 aaKnown RBP10.14□□□□□ -0.79
PCM1-219ENST00000523540 TUSC1Q2TAM9 212 aa10.14□□□□□ -0.79
PCM1-219ENST00000523540 HOXA2O43364 376 aa10.13□□□□□ -0.79
PCM1-219ENST00000523540 NUTM1Q86Y26 1132 aa10.13□□□□□ -0.79
PCM1-219ENST00000523540 SENP2Q9HC62 589 aa10.13□□□□□ -0.79
PCM1-219ENST00000523540 HPS1Q92902 700 aa10.12□□□□□ -0.79
PCM1-219ENST00000523540 RSPH6AQ9H0K4 717 aa10.12□□□□□ -0.79
PCM1-219ENST00000523540 GOPCQ9HD26 462 aa10.12□□□□□ -0.79
PCM1-219ENST00000523540 SPIRE2Q8WWL2 714 aa10.11□□□□□ -0.79
PCM1-219ENST00000523540 USB1Q9BQ65 265 aaKnown RBP10.11□□□□□ -0.79
PCM1-219ENST00000523540 SKOR1P84550 965 aa10.1□□□□□ -0.79
PCM1-219ENST00000523540 KIFC2Q96AC6 838 aa10.09□□□□□ -0.79
PCM1-219ENST00000523540 WNT7BP56706 349 aa10.08□□□□□ -0.8
PCM1-219ENST00000523540 SH3D19Q5HYK7 790 aa10.08□□□□□ -0.8
PCM1-219ENST00000523540 RC3H1Q5TC82 1133 aaKnown RBP10.08□□□□□ -0.8
PCM1-219ENST00000523540 TBC1D2Q9BYX2 928 aa10.08□□□□□ -0.8
PCM1-219ENST00000523540 SPTLC1O15269 473 aa10.07□□□□□ -0.8
PCM1-219ENST00000523540 PRPF38BQ5VTL8 546 aaKnown RBP10.05□□□□□ -0.8
PCM1-219ENST00000523540 RSBN1LQ6PCB5 846 aaPredicted RBP10.05□□□□□ -0.8
PCM1-219ENST00000523540 SPDYE5A6NIY4 337 aa10.04□□□□□ -0.8
PCM1-219ENST00000523540 MYSM1Q5VVJ2 828 aa10.04□□□□□ -0.8
PCM1-219ENST00000523540 HLA-CQ95604 372 aa10.04□□□□□ -0.8
PCM1-219ENST00000523540 MOXD2PA6NHM9 499 aa10.02□□□□□ -0.81
PCM1-219ENST00000523540 FDX1P10109 184 aa10.02□□□□□ -0.81
PCM1-219ENST00000523540 SKIV2LQ15477 1246 aaKnown RBP10.02□□□□□ -0.81
PCM1-219ENST00000523540 SIAH2O43255 324 aa10.01□□□□□ -0.81
PCM1-219ENST00000523540 CCDC24Q8N4L8 307 aa10.01□□□□□ -0.81
PCM1-219ENST00000523540 JUNDP17535 347 aa10□□□□□ -0.81
PCM1-219ENST00000523540 LORP23490 312 aaPredicted RBP10□□□□□ -0.81
PCM1-219ENST00000523540 CLK2P49760 499 aaKnown RBP10□□□□□ -0.81
PCM1-219ENST00000523540 RIC3Q7Z5B4 369 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms