RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	DAPK1	P53355	1430 aa		12.59	□□□□□ -0.39
TCF7-223	ENST00000522653	BRMS1	Q9HCU9	246 aa		12.59	□□□□□ -0.39
TCF7-223	ENST00000522653		A0A087WZG4	1122 aa		12.58	□□□□□ -0.39
TCF7-223	ENST00000522653	GNAI1	P63096	354 aa		12.58	□□□□□ -0.4
TCF7-223	ENST00000522653	XBP1	P17861	261 aa		12.58	□□□□□ -0.4
TCF7-223	ENST00000522653	ZPR1	O75312	459 aa		12.58	□□□□□ -0.4
TCF7-223	ENST00000522653	IFIT2	P09913	472 aa	Known RBP	12.58	□□□□□ -0.4
TCF7-223	ENST00000522653	FAM161A	Q3B820	660 aa		12.58	□□□□□ -0.4
TCF7-223	ENST00000522653	RNF20	Q5VTR2	975 aa		12.58	□□□□□ -0.4
TCF7-223	ENST00000522653	TSR1	Q2NL82	804 aa	Known RBP	12.58	□□□□□ -0.4
TCF7-223	ENST00000522653	PODXL2	Q9NZ53	605 aa		12.58	□□□□□ -0.4
TCF7-223	ENST00000522653	NCOA2	Q15596	1464 aa		12.57	□□□□□ -0.4
TCF7-223	ENST00000522653	SNAPC4	Q5SXM2	1469 aa		12.57	□□□□□ -0.4
TCF7-223	ENST00000522653	IK	Q13123	557 aa	Predicted RBP	12.57	□□□□□ -0.4
TCF7-223	ENST00000522653	HOOK1	Q9UJC3	728 aa	Known RBP	12.57	□□□□□ -0.4
TCF7-223	ENST00000522653	STARD3NL	O95772	234 aa		12.57	□□□□□ -0.4
TCF7-223	ENST00000522653	UBE2Q2	Q8WVN8	375 aa		12.57	□□□□□ -0.4
TCF7-223	ENST00000522653	MAGI1	Q96QZ7	1491 aa	Predicted RBP	12.57	□□□□□ -0.4
TCF7-223	ENST00000522653	ERC2	O15083	957 aa		12.56	□□□□□ -0.4
TCF7-223	ENST00000522653	EIF2S2	P20042	333 aa	Known RBP	12.56	□□□□□ -0.4
TCF7-223	ENST00000522653	SART3	Q15020	963 aa	Known RBP	12.56	□□□□□ -0.4
TCF7-223	ENST00000522653	APP	P05067	770 aa		12.56	□□□□□ -0.4
TCF7-223	ENST00000522653	NES	P48681	1621 aa		12.56	□□□□□ -0.4
TCF7-223	ENST00000522653	HFM1	A2PYH4	1435 aa		12.55	□□□□□ -0.4
TCF7-223	ENST00000522653	NFKBIB	Q15653	356 aa		12.55	□□□□□ -0.4
TCF7-223	ENST00000522653	EPRS	P07814	1512 aa	Known RBP	12.55	□□□□□ -0.4
TCF7-223	ENST00000522653	SF3A1	Q15459	793 aa	Known RBP	12.55	□□□□□ -0.4
TCF7-223	ENST00000522653	MAP7D2	Q96T17	732 aa		12.55	□□□□□ -0.4
TCF7-223	ENST00000522653	MPHOSPH6	Q99547	160 aa	Known RBP	12.55	□□□□□ -0.4
TCF7-223	ENST00000522653	DIAPH3	Q9NSV4	1193 aa		12.55	□□□□□ -0.4
TCF7-223	ENST00000522653	TMEM132A	Q24JP5	1023 aa		12.54	□□□□□ -0.4
TCF7-223	ENST00000522653	ANKRD20A12P	Q8NF67	263 aa		12.54	□□□□□ -0.4
TCF7-223	ENST00000522653	APBB1	O00213	710 aa		12.54	□□□□□ -0.4
TCF7-223	ENST00000522653	SLF2	Q8IX21	1173 aa		12.54	□□□□□ -0.4
TCF7-223	ENST00000522653	BRPF3	Q9ULD4	1205 aa		12.54	□□□□□ -0.4
TCF7-223	ENST00000522653	TPM1	P09493	284 aa		12.54	□□□□□ -0.4
TCF7-223	ENST00000522653	BEGAIN	Q9BUH8	593 aa		12.54	□□□□□ -0.4
TCF7-223	ENST00000522653	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.54	□□□□□ -0.4
TCF7-223	ENST00000522653	TPM3	P06753	285 aa		12.54	□□□□□ -0.4
TCF7-223	ENST00000522653	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.54	□□□□□ -0.4
TCF7-223	ENST00000522653	TSPYL4	Q9UJ04	414 aa		12.54	□□□□□ -0.4
TCF7-223	ENST00000522653	RDX	P35241	583 aa	Known RBP	12.53	□□□□□ -0.4
TCF7-223	ENST00000522653	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.53	□□□□□ -0.4
TCF7-223	ENST00000522653	SAFB	Q15424	915 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
TCF7-223	ENST00000522653	ZKSCAN1	P17029	563 aa	Predicted RBP	12.53	□□□□□ -0.4
TCF7-223	ENST00000522653	SLC4A3	P48751	1232 aa		12.53	□□□□□ -0.4
TCF7-223	ENST00000522653	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.53	□□□□□ -0.4
TCF7-223	ENST00000522653	ATP6V1D	Q9Y5K8	247 aa		12.53	□□□□□ -0.4
TCF7-223	ENST00000522653	TPD52L1	Q16890	204 aa	Predicted RBP	12.53	□□□□□ -0.4
TCF7-223	ENST00000522653	CCDC27	Q2M243	656 aa		12.53	□□□□□ -0.4
TCF7-223	ENST00000522653	TMEM87A	Q8NBN3	555 aa		12.53	□□□□□ -0.4
TCF7-223	ENST00000522653	FAM184A	Q8NB25	1140 aa		12.52	□□□□□ -0.4
TCF7-223	ENST00000522653	MPHOSPH10	O00566	681 aa	Known RBP	12.52	□□□□□ -0.41
TCF7-223	ENST00000522653	NF2	P35240	595 aa		12.52	□□□□□ -0.41
TCF7-223	ENST00000522653	HSP90AB3P	Q58FF7	597 aa		12.52	□□□□□ -0.41
TCF7-223	ENST00000522653	DRC7	Q8IY82	874 aa		12.52	□□□□□ -0.41
TCF7-223	ENST00000522653	ZNF287	Q9HBT7	754 aa		12.52	□□□□□ -0.41
TCF7-223	ENST00000522653	TPRN	Q4KMQ1	711 aa		12.52	□□□□□ -0.41
TCF7-223	ENST00000522653	MTERF4	Q7Z6M4	381 aa	Known RBP	12.52	□□□□□ -0.41
TCF7-223	ENST00000522653	DENND4B	O75064	1496 aa	Predicted RBP	12.52	□□□□□ -0.41
TCF7-223	ENST00000522653	EFCAB5	A4FU69	1503 aa		12.52	□□□□□ -0.41
TCF7-223	ENST00000522653	ZSCAN25	Q6NSZ9	544 aa		12.52	□□□□□ -0.41
TCF7-223	ENST00000522653	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.52	□□□□□ -0.41
TCF7-223	ENST00000522653	ANKRD30B	Q9BXX2	1392 aa		12.51	□□□□□ -0.41
TCF7-223	ENST00000522653	BICRA	Q9NZM4	1560 aa		12.51	□□□□□ -0.41
TCF7-223	ENST00000522653	CCDC30	Q5VVM6	783 aa		12.51	□□□□□ -0.41
TCF7-223	ENST00000522653	RRP1	P56182	461 aa	Known RBP	12.51	□□□□□ -0.41
TCF7-223	ENST00000522653	TTLL12	Q14166	644 aa	Predicted RBP	12.51	□□□□□ -0.41
TCF7-223	ENST00000522653	CPLX1	O14810	134 aa		12.51	□□□□□ -0.41
TCF7-223	ENST00000522653	ERC1	Q8IUD2	1116 aa		12.51	□□□□□ -0.41
TCF7-223	ENST00000522653	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
TCF7-223	ENST00000522653	TOPBP1	Q92547	1522 aa		12.5	□□□□□ -0.41
TCF7-223	ENST00000522653	RBM5	P52756	815 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
TCF7-223	ENST00000522653	L3MBTL2	Q969R5	705 aa		12.5	□□□□□ -0.41
TCF7-223	ENST00000522653	RTEL1-TNFRSF6B	F6WH68	1400 aa		12.5	□□□□□ -0.41
TCF7-223	ENST00000522653	KIAA0586	Q9BVV6	1533 aa		12.5	□□□□□ -0.41
TCF7-223	ENST00000522653		H3BQV1	296 aa		12.5	□□□□□ -0.41
TCF7-223	ENST00000522653	EXOC5	O00471	708 aa		12.5	□□□□□ -0.41
TCF7-223	ENST00000522653	ST18	O60284	1047 aa		12.5	□□□□□ -0.41
TCF7-223	ENST00000522653	IFFO2	Q5TF58	517 aa		12.5	□□□□□ -0.41
TCF7-223	ENST00000522653	AK7	Q96M32	723 aa		12.5	□□□□□ -0.41
TCF7-223	ENST00000522653	DNMBP	Q6XZF7	1577 aa		12.5	□□□□□ -0.41
TCF7-223	ENST00000522653	ANKRD50	Q9ULJ7	1429 aa		12.5	□□□□□ -0.41
TCF7-223	ENST00000522653	RRP9	O43818	475 aa	Known RBP	12.49	□□□□□ -0.41
TCF7-223	ENST00000522653	NFXL1	Q6ZNB6	911 aa		12.49	□□□□□ -0.41
TCF7-223	ENST00000522653	ATAD2	Q6PL18	1390 aa		12.49	□□□□□ -0.41
TCF7-223	ENST00000522653	RALYL	Q86SE5	291 aa	Known RBP	12.49	□□□□□ -0.41
TCF7-223	ENST00000522653	SMARCC1	Q92922	1105 aa	Predicted RBP	12.49	□□□□□ -0.41
TCF7-223	ENST00000522653	FAM13B	Q9NYF5	915 aa		12.49	□□□□□ -0.41
TCF7-223	ENST00000522653	LRRC9	Q6ZRR7	1453 aa		12.48	□□□□□ -0.41
TCF7-223	ENST00000522653		E9PSI1	815 aa		12.48	□□□□□ -0.41
TCF7-223	ENST00000522653	FKBP5	Q13451	457 aa	Predicted RBP	12.48	□□□□□ -0.41
TCF7-223	ENST00000522653	EXOC6	Q8TAG9	804 aa		12.48	□□□□□ -0.41
TCF7-223	ENST00000522653	DDX54	Q8TDD1	881 aa	Known RBP	12.48	□□□□□ -0.41
TCF7-223	ENST00000522653		A0A0U1RQG5	324 aa	Predicted RBP	12.48	□□□□□ -0.41
TCF7-223	ENST00000522653	IGHMBP2	P38935	993 aa	Known RBP	12.48	□□□□□ -0.41
TCF7-223	ENST00000522653	NACAP1	Q9BZK3	213 aa		12.48	□□□□□ -0.41
TCF7-223	ENST00000522653	CASKIN1	Q8WXD9	1431 aa		12.48	□□□□□ -0.41
TCF7-223	ENST00000522653	FAM135A	Q9P2D6	1515 aa		12.48	□□□□□ -0.41
TCF7-223	ENST00000522653	HIP1	O00291	1037 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms