RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 USP21Q9UK80 565 aa18.67■□□□□ 0.58
BRF2-204ENST00000522539 TRPC5Q9UL62 973 aaPredicted RBP18.67■□□□□ 0.58
BRF2-204ENST00000522539 PPLO60437 1756 aa18.67■□□□□ 0.58
BRF2-204ENST00000522539 CDC42BPGQ6DT37 1551 aa18.67■□□□□ 0.58
BRF2-204ENST00000522539 ATAD2Q6PL18 1390 aa18.67■□□□□ 0.58
BRF2-204ENST00000522539 PXDNQ92626 1479 aa18.65■□□□□ 0.58
BRF2-204ENST00000522539 BCL9LQ86UU0 1499 aa18.64■□□□□ 0.57
BRF2-204ENST00000522539 NPHP3Q7Z494 1330 aa18.63■□□□□ 0.57
BRF2-204ENST00000522539 TECPR2O15040 1411 aa18.63■□□□□ 0.57
BRF2-204ENST00000522539 EP400Q96L91 3159 aa18.61■□□□□ 0.57
BRF2-204ENST00000522539 ESCO1Q5FWF5 840 aa18.6■□□□□ 0.57
BRF2-204ENST00000522539 SLC4A1APQ9BWU0 796 aaKnown RBP18.6■□□□□ 0.57
BRF2-204ENST00000522539 MARF1Q9Y4F3 1742 aaKnown RBP18.59■□□□□ 0.57
BRF2-204ENST00000522539 SPATA31E1Q6ZUB1 1445 aa18.57■□□□□ 0.56
BRF2-204ENST00000522539 ADGRF5Q8IZF2 1346 aa18.57■□□□□ 0.56
BRF2-204ENST00000522539 LRPPRCP42704 1394 aaKnown RBP18.56■□□□□ 0.56
BRF2-204ENST00000522539 ABCC11Q96J66 1382 aa18.56■□□□□ 0.56
BRF2-204ENST00000522539 FOXO3O43524 673 aa18.56■□□□□ 0.56
BRF2-204ENST00000522539 CCDC125Q86Z20 511 aa18.56■□□□□ 0.56
BRF2-204ENST00000522539 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.55■□□□□ 0.56
BRF2-204ENST00000522539 GJD4Q96KN9 370 aaPredicted RBP18.55■□□□□ 0.56
BRF2-204ENST00000522539 KNDC1Q76NI1 1749 aa18.54■□□□□ 0.56
BRF2-204ENST00000522539 SLIT2O94813 1529 aa18.54■□□□□ 0.56
BRF2-204ENST00000522539 IFT172Q9UG01 1749 aa18.54■□□□□ 0.56
BRF2-204ENST00000522539 ANKRD30BQ9BXX2 1392 aa18.54■□□□□ 0.56
BRF2-204ENST00000522539 XPCQ01831 940 aaPredicted RBP18.53■□□□□ 0.56
BRF2-204ENST00000522539 WAPLQ7Z5K2 1190 aa18.53■□□□□ 0.56
BRF2-204ENST00000522539 PLEKHH1Q9ULM0 1364 aa18.53■□□□□ 0.56
BRF2-204ENST00000522539 CCDC144AA2RUR9 1427 aa18.52■□□□□ 0.56
BRF2-204ENST00000522539 PIK3C2GO75747 1445 aa18.52■□□□□ 0.56
BRF2-204ENST00000522539 FOXD1Q16676 465 aa18.52■□□□□ 0.56
BRF2-204ENST00000522539 ZRANB1Q9UGI0 708 aa18.52■□□□□ 0.56
BRF2-204ENST00000522539 FMN2Q9NZ56 1722 aa18.52■□□□□ 0.55
BRF2-204ENST00000522539 SPATA31A3Q5VYP0 1347 aa18.51■□□□□ 0.55
BRF2-204ENST00000522539 GLI3P10071 1580 aa18.51■□□□□ 0.55
BRF2-204ENST00000522539 UNC5CLQ8IV45 518 aa18.5■□□□□ 0.55
BRF2-204ENST00000522539 RALGAPBQ86X10 1494 aa18.5■□□□□ 0.55
BRF2-204ENST00000522539 KIF1AQ12756 1690 aa18.5■□□□□ 0.55
BRF2-204ENST00000522539 SIRT1Q96EB6 747 aa18.49■□□□□ 0.55
BRF2-204ENST00000522539 STK26Q9P289 416 aa18.49■□□□□ 0.55
BRF2-204ENST00000522539 YTHDC2Q9H6S0 1430 aaKnown RBP18.49■□□□□ 0.55
BRF2-204ENST00000522539 TMEM132EQ6IEE7 984 aa18.48■□□□□ 0.55
BRF2-204ENST00000522539 USP32Q8NFA0 1604 aa18.48■□□□□ 0.55
BRF2-204ENST00000522539 NUTM2FA1L443 756 aa18.47■□□□□ 0.55
BRF2-204ENST00000522539 RGL3Q3MIN7 710 aa18.47■□□□□ 0.55
BRF2-204ENST00000522539 BLMP54132 1417 aaPredicted RBP18.46■□□□□ 0.55
BRF2-204ENST00000522539 NRXN1Q9ULB1 1477 aa18.45■□□□□ 0.54
BRF2-204ENST00000522539 TNS3Q68CZ2 1445 aa18.44■□□□□ 0.54
BRF2-204ENST00000522539 KRT28Q7Z3Y7 464 aa18.44■□□□□ 0.54
BRF2-204ENST00000522539 MPHOSPH9Q99550 1183 aa18.44■□□□□ 0.54
BRF2-204ENST00000522539 C14orf93Q9H972 538 aaKnown RBP18.43■□□□□ 0.54
BRF2-204ENST00000522539 ONECUT3O60422 494 aaPredicted RBP18.42■□□□□ 0.54
BRF2-204ENST00000522539 VPS72Q15906 364 aa18.42■□□□□ 0.54
BRF2-204ENST00000522539 SBNO1A3KN83 1393 aa18.42■□□□□ 0.54
BRF2-204ENST00000522539 PHF8Q9UPP1 1060 aa18.41■□□□□ 0.54
BRF2-204ENST00000522539 BRWD3Q6RI45 1802 aa18.41■□□□□ 0.54
BRF2-204ENST00000522539 NWD2Q9ULI1 1742 aa18.4■□□□□ 0.54
BRF2-204ENST00000522539 PSME1Q06323 249 aa18.39■□□□□ 0.53
BRF2-204ENST00000522539 SEPT12Q8IYM1 358 aa18.39■□□□□ 0.53
BRF2-204ENST00000522539 RGPD8O14715 1765 aaPredicted RBP18.39■□□□□ 0.53
BRF2-204ENST00000522539 ABCA3Q99758 1704 aa18.38■□□□□ 0.53
BRF2-204ENST00000522539 PLCH1Q4KWH8 1693 aa18.38■□□□□ 0.53
BRF2-204ENST00000522539 CABLES1Q8TDN4 633 aa18.37■□□□□ 0.53
BRF2-204ENST00000522539 ARHGEF10O15013 1369 aa18.37■□□□□ 0.53
BRF2-204ENST00000522539 DLC1Q96QB1 1528 aa18.37■□□□□ 0.53
BRF2-204ENST00000522539 DHX57Q6P158 1386 aaKnown RBP18.36■□□□□ 0.53
BRF2-204ENST00000522539 ANKARQ7Z5J8 1434 aa18.36■□□□□ 0.53
BRF2-204ENST00000522539 CFAP70Q5T0N1 1121 aa18.35■□□□□ 0.53
BRF2-204ENST00000522539 DEFB132Q7Z7B7 95 aa18.35■□□□□ 0.53
BRF2-204ENST00000522539 ADGRB2O60241 1585 aa18.34■□□□□ 0.53
BRF2-204ENST00000522539 FAM83GA6ND36 823 aa18.33■□□□□ 0.52
BRF2-204ENST00000522539 PRAM1Q96QH2 718 aa18.33■□□□□ 0.52
BRF2-204ENST00000522539 NRAPQ86VF7 1730 aa18.32■□□□□ 0.52
BRF2-204ENST00000522539 ACIN1Q9UKV3 1341 aaKnown RBP18.32■□□□□ 0.52
BRF2-204ENST00000522539 HAP1P54257 671 aaPredicted RBP18.32■□□□□ 0.52
BRF2-204ENST00000522539 KRT27Q7Z3Y8 459 aa18.32■□□□□ 0.52
BRF2-204ENST00000522539 TRPM3Q9HCF6 1732 aaPredicted RBP18.32■□□□□ 0.52
BRF2-204ENST00000522539 LRP5O75197 1615 aa18.31■□□□□ 0.52
BRF2-204ENST00000522539 ADGRB1O14514 1584 aa18.31■□□□□ 0.52
BRF2-204ENST00000522539 SF3B2Q13435 895 aaKnown RBP18.3■□□□□ 0.52
BRF2-204ENST00000522539 ALS2Q96Q42 1657 aa18.29■□□□□ 0.52
BRF2-204ENST00000522539 SAFB2Q14151 953 aaKnown RBP eCLIP18.28■□□□□ 0.52
BRF2-204ENST00000522539 PMFBP1Q8TBY8 1022 aa18.28■□□□□ 0.52
BRF2-204ENST00000522539 LMOD2Q6P5Q4 547 aa18.27■□□□□ 0.52
BRF2-204ENST00000522539 CCDC9Q9Y3X0 531 aaKnown RBP18.27■□□□□ 0.52
BRF2-204ENST00000522539 POGKQ9P215 609 aa18.26■□□□□ 0.51
BRF2-204ENST00000522539 COL14A1Q05707 1796 aaKnown RBP18.26■□□□□ 0.51
BRF2-204ENST00000522539 PRR36Q9H6K5 1346 aa18.25■□□□□ 0.51
BRF2-204ENST00000522539 BTG4Q9NY30 223 aa18.25■□□□□ 0.51
BRF2-204ENST00000522539 CRYBG1Q9Y4K1 1723 aa18.25■□□□□ 0.51
BRF2-204ENST00000522539 TULP4Q9NRJ4 1543 aa18.24■□□□□ 0.51
BRF2-204ENST00000522539 FAM98CQ17RN3 349 aaKnown RBP18.24■□□□□ 0.51
BRF2-204ENST00000522539 EIF3AQ14152 1382 aaKnown RBP18.24■□□□□ 0.51
BRF2-204ENST00000522539 DISP2A7MBM2 1401 aa18.23■□□□□ 0.51
BRF2-204ENST00000522539 GPRASP1Q5JY77 1395 aa18.23■□□□□ 0.51
BRF2-204ENST00000522539 PLEKHG5O94827 1062 aa18.23■□□□□ 0.51
BRF2-204ENST00000522539 BAG6P46379 1132 aa18.23■□□□□ 0.51
BRF2-204ENST00000522539 SPATA31A5Q5VU36 1347 aa18.23■□□□□ 0.51
BRF2-204ENST00000522539 SPATA31A7Q8IWB4 1347 aa18.23■□□□□ 0.51
BRF2-204ENST00000522539 THSD7AQ9UPZ6 1657 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms