RNA–Protein interactions for RNA: ENST00000522033.1

GLI4-208, Transcript of GLI family zinc finger 4, human

TSL 2

Gene GLI4, Length 615 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GLI4-208	ENST00000522033	CDC42BPG	Q6DT37	1551 aa		33.41	■■■□□ 2.94
GLI4-208	ENST00000522033	PLEKHH1	Q9ULM0	1364 aa		33.38	■■■□□ 2.93
GLI4-208	ENST00000522033	SPATA31A6	Q5VVP1	1343 aa		33.37	■■■□□ 2.93
GLI4-208	ENST00000522033	LRRC59	Q96AG4	307 aa	Known RBP	33.37	■■■□□ 2.93
GLI4-208	ENST00000522033	NHSL1	Q5SYE7	1610 aa		33.37	■■■□□ 2.93
GLI4-208	ENST00000522033	ORAI2	Q96SN7	254 aa		33.36	■■■□□ 2.93
GLI4-208	ENST00000522033	POGK	Q9P215	609 aa		33.35	■■■□□ 2.93
GLI4-208	ENST00000522033	ADGRB1	O14514	1584 aa		33.34	■■■□□ 2.93
GLI4-208	ENST00000522033	DLC1	Q96QB1	1528 aa		33.34	■■■□□ 2.93
GLI4-208	ENST00000522033	PRAM1	Q96QH2	718 aa		33.34	■■■□□ 2.93
GLI4-208	ENST00000522033	ESCO1	Q5FWF5	840 aa		33.32	■■■□□ 2.92
GLI4-208	ENST00000522033	TRAK1	Q9UPV9	953 aa		33.31	■■■□□ 2.92
GLI4-208	ENST00000522033	SHPRH	Q149N8	1683 aa		33.3	■■■□□ 2.92
GLI4-208	ENST00000522033	DDX17	Q92841	729 aa	Known RBP	33.29	■■■□□ 2.92
GLI4-208	ENST00000522033	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.27	■■■□□ 2.92
GLI4-208	ENST00000522033	NUTM2F	A1L443	756 aa		33.25	■■■□□ 2.91
GLI4-208	ENST00000522033	SOS2	Q07890	1332 aa	Predicted RBP	33.25	■■■□□ 2.91
GLI4-208	ENST00000522033	NPHP3	Q7Z494	1330 aa		33.25	■■■□□ 2.91
GLI4-208	ENST00000522033	FMN2	Q9NZ56	1722 aa		33.23	■■■□□ 2.91
GLI4-208	ENST00000522033	SIN3A	Q96ST3	1273 aa		33.23	■■■□□ 2.91
GLI4-208	ENST00000522033	MEX3C	Q5U5Q3	659 aa	Known RBP	33.22	■■■□□ 2.91
GLI4-208	ENST00000522033	KIAA1210	Q9ULL0	1709 aa		33.22	■■■□□ 2.91
GLI4-208	ENST00000522033	NEUROD1	Q13562	356 aa		33.21	■■■□□ 2.91
GLI4-208	ENST00000522033	RGS17	Q9UGC6	210 aa	Predicted RBP	33.21	■■■□□ 2.91
GLI4-208	ENST00000522033	SOCS7	O14512	581 aa		33.2	■■■□□ 2.91
GLI4-208	ENST00000522033	L3MBTL2	Q969R5	705 aa		33.2	■■■□□ 2.91
GLI4-208	ENST00000522033	FOXO3	O43524	673 aa		33.18	■■■□□ 2.9
GLI4-208	ENST00000522033	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.16	■■■□□ 2.9
GLI4-208	ENST00000522033	NUTM2E	B1AL46	878 aa	Predicted RBP	33.16	■■■□□ 2.9
GLI4-208	ENST00000522033	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.16	■■■□□ 2.9
GLI4-208	ENST00000522033	PNPLA6	Q8IY17	1366 aa		33.16	■■■□□ 2.9
GLI4-208	ENST00000522033	LRP6	O75581	1613 aa		33.15	■■■□□ 2.9
GLI4-208	ENST00000522033	ADGRB2	O60241	1585 aa		33.14	■■■□□ 2.9
GLI4-208	ENST00000522033	EIF3A	Q14152	1382 aa	Known RBP	33.13	■■■□□ 2.89
GLI4-208	ENST00000522033	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.13	■■■□□ 2.89
GLI4-208	ENST00000522033	KIF1A	Q12756	1690 aa		33.12	■■■□□ 2.89
GLI4-208	ENST00000522033	ANKAR	Q7Z5J8	1434 aa		33.11	■■■□□ 2.89
GLI4-208	ENST00000522033	NBPF1	Q3BBV0	1214 aa		33.11	■■■□□ 2.89
GLI4-208	ENST00000522033	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.11	■■■□□ 2.89
GLI4-208	ENST00000522033	PHF8	Q9UPP1	1060 aa		33.11	■■■□□ 2.89
GLI4-208	ENST00000522033	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.09	■■■□□ 2.89
GLI4-208	ENST00000522033	WASL	O00401	505 aa	Predicted RBP	33.09	■■■□□ 2.89
GLI4-208	ENST00000522033	PXDN	Q92626	1479 aa		33.09	■■■□□ 2.89
GLI4-208	ENST00000522033	ZNF772	Q68DY9	489 aa	Predicted RBP	33.08	■■■□□ 2.89
GLI4-208	ENST00000522033	RGPD8	O14715	1765 aa	Predicted RBP	33.07	■■■□□ 2.88
GLI4-208	ENST00000522033	XPC	Q01831	940 aa	Predicted RBP	33.06	■■■□□ 2.88
GLI4-208	ENST00000522033	POTEA	Q6S8J7	498 aa		33.06	■■■□□ 2.88
GLI4-208	ENST00000522033	PSME1	Q06323	249 aa		33.05	■■■□□ 2.88
GLI4-208	ENST00000522033	KRT28	Q7Z3Y7	464 aa		33.05	■■■□□ 2.88
GLI4-208	ENST00000522033	TULP4	Q9NRJ4	1543 aa		33	■■■□□ 2.87
GLI4-208	ENST00000522033	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.99	■■■□□ 2.87
GLI4-208	ENST00000522033	USP32	Q8NFA0	1604 aa		32.99	■■■□□ 2.87
GLI4-208	ENST00000522033	PMFBP1	Q8TBY8	1022 aa		32.98	■■■□□ 2.87
GLI4-208	ENST00000522033	SPATA31A3	Q5VYP0	1347 aa		32.98	■■■□□ 2.87
GLI4-208	ENST00000522033	C8orf37	Q96NL8	207 aa		32.97	■■■□□ 2.87
GLI4-208	ENST00000522033	ADAMTS2	O95450	1211 aa		32.96	■■■□□ 2.87
GLI4-208	ENST00000522033	TONSL	Q96HA7	1378 aa		32.96	■■■□□ 2.87
GLI4-208	ENST00000522033	CDK19	Q9BWU1	502 aa		32.95	■■■□□ 2.87
GLI4-208	ENST00000522033	AFF2	P51816	1311 aa		32.95	■■■□□ 2.86
GLI4-208	ENST00000522033	PRR36	Q9H6K5	1346 aa		32.95	■■■□□ 2.86
GLI4-208	ENST00000522033	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.95	■■■□□ 2.86
GLI4-208	ENST00000522033	TRPM1	Q7Z4N2	1603 aa		32.94	■■■□□ 2.86
GLI4-208	ENST00000522033	NUDT16	Q96DE0	195 aa	Known RBP	32.93	■■■□□ 2.86
GLI4-208	ENST00000522033	NGLY1	Q96IV0	654 aa		32.93	■■■□□ 2.86
GLI4-208	ENST00000522033	SBNO1	A3KN83	1393 aa		32.93	■■■□□ 2.86
GLI4-208	ENST00000522033	ROCK2	O75116	1388 aa	Known RBP	32.93	■■■□□ 2.86
GLI4-208	ENST00000522033	GPRASP1	Q5JY77	1395 aa		32.91	■■■□□ 2.86
GLI4-208	ENST00000522033	NGDN	Q8NEJ9	315 aa	Known RBP	32.9	■■■□□ 2.86
GLI4-208	ENST00000522033	TNS3	Q68CZ2	1445 aa		32.89	■■■□□ 2.86
GLI4-208	ENST00000522033	ARHGEF10	O15013	1369 aa		32.87	■■■□□ 2.85
GLI4-208	ENST00000522033	ITSN1	Q15811	1721 aa		32.86	■■■□□ 2.85
GLI4-208	ENST00000522033	NBPF8	Q3BBV2	869 aa		32.86	■■■□□ 2.85
GLI4-208	ENST00000522033	CCDC61	Q9Y6R9	512 aa		32.86	■■■□□ 2.85
GLI4-208	ENST00000522033	ATP7B	P35670	1465 aa		32.86	■■■□□ 2.85
GLI4-208	ENST00000522033	RXRB	P28702	533 aa		32.85	■■■□□ 2.85
GLI4-208	ENST00000522033	LMOD2	Q6P5Q4	547 aa		32.85	■■■□□ 2.85
GLI4-208	ENST00000522033	HAP1	P54257	671 aa	Predicted RBP	32.82	■■■□□ 2.84
GLI4-208	ENST00000522033	SRPK2	P78362	688 aa	Known RBP	32.82	■■■□□ 2.84
GLI4-208	ENST00000522033	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.82	■■■□□ 2.84
GLI4-208	ENST00000522033	QTRT2	Q9H974	415 aa	Known RBP	32.82	■■■□□ 2.84
GLI4-208	ENST00000522033	USP21	Q9UK80	565 aa		32.8	■■■□□ 2.84
GLI4-208	ENST00000522033	QRICH2	Q9H0J4	1663 aa		32.8	■■■□□ 2.84
GLI4-208	ENST00000522033	PLEKHG3	A1L390	1219 aa		32.78	■■■□□ 2.84
GLI4-208	ENST00000522033	MARF1	Q9Y4F3	1742 aa	Known RBP	32.77	■■■□□ 2.84
GLI4-208	ENST00000522033	CARD11	Q9BXL7	1154 aa		32.77	■■■□□ 2.84
GLI4-208	ENST00000522033	PCGF6	Q9BYE7	350 aa		32.77	■■■□□ 2.84
GLI4-208	ENST00000522033	EVC2	Q86UK5	1308 aa		32.77	■■■□□ 2.84
GLI4-208	ENST00000522033	RBM6	P78332	1123 aa	Known RBP	32.76	■■■□□ 2.83
GLI4-208	ENST00000522033	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.75	■■■□□ 2.83
GLI4-208	ENST00000522033	PAK3	O75914	559 aa	Predicted RBP	32.75	■■■□□ 2.83
GLI4-208	ENST00000522033	POLR3A	O14802	1390 aa	Predicted RBP	32.74	■■■□□ 2.83
GLI4-208	ENST00000522033	CABP2	Q9NPB3	220 aa		32.74	■■■□□ 2.83
GLI4-208	ENST00000522033	TRPC5	Q9UL62	973 aa	Predicted RBP	32.74	■■■□□ 2.83
GLI4-208	ENST00000522033	ACE	P12821	1306 aa		32.74	■■■□□ 2.83
GLI4-208	ENST00000522033	CABLES1	Q8TDN4	633 aa		32.73	■■■□□ 2.83
GLI4-208	ENST00000522033	TOPAZ1	Q8N9V7	1692 aa		32.72	■■■□□ 2.83
GLI4-208	ENST00000522033	RALGAPB	Q86X10	1494 aa		32.72	■■■□□ 2.83
GLI4-208	ENST00000522033	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.72	■■■□□ 2.83
GLI4-208	ENST00000522033	CLSPN	Q9HAW4	1339 aa		32.72	■■■□□ 2.83
GLI4-208	ENST00000522033	ALS2	Q96Q42	1657 aa		32.69	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms