RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	KIAA1210	Q9ULL0	1709 aa		12.07	□□□□□ -0.48
CTNNA1-231	ENST00000521941	MED1	Q15648	1581 aa	Predicted RBP	12.06	□□□□□ -0.48
CTNNA1-231	ENST00000521941	BRINP3	Q76B58	766 aa		12.06	□□□□□ -0.48
CTNNA1-231	ENST00000521941	STAC3	Q96MF2	364 aa		12.06	□□□□□ -0.48
CTNNA1-231	ENST00000521941	PRAM1	Q96QH2	718 aa		12.06	□□□□□ -0.48
CTNNA1-231	ENST00000521941	POGK	Q9P215	609 aa		12.06	□□□□□ -0.48
CTNNA1-231	ENST00000521941	COL16A1	Q07092	1604 aa	Predicted RBP	12.06	□□□□□ -0.48
CTNNA1-231	ENST00000521941	C1orf167	Q5SNV9	1468 aa		12.06	□□□□□ -0.48
CTNNA1-231	ENST00000521941	DLC1	Q96QB1	1528 aa		12.06	□□□□□ -0.48
CTNNA1-231	ENST00000521941	FMN2	Q9NZ56	1722 aa		12.06	□□□□□ -0.48
CTNNA1-231	ENST00000521941	DISP3	Q9P2K9	1392 aa		12.05	□□□□□ -0.48
CTNNA1-231	ENST00000521941	NHSL1	Q5SYE7	1610 aa		12.05	□□□□□ -0.48
CTNNA1-231	ENST00000521941	AHDC1	Q5TGY3	1603 aa	Predicted RBP	12.05	□□□□□ -0.48
CTNNA1-231	ENST00000521941	TONSL	Q96HA7	1378 aa		12.05	□□□□□ -0.48
CTNNA1-231	ENST00000521941	DDX17	Q92841	729 aa	Known RBP	12.04	□□□□□ -0.48
CTNNA1-231	ENST00000521941	TRPM1	Q7Z4N2	1603 aa		12.04	□□□□□ -0.48
CTNNA1-231	ENST00000521941	RGPD8	O14715	1765 aa	Predicted RBP	12.03	□□□□□ -0.48
CTNNA1-231	ENST00000521941	HIRIP3	Q9BW71	556 aa	Predicted RBP	12.03	□□□□□ -0.48
CTNNA1-231	ENST00000521941	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.03	□□□□□ -0.48
CTNNA1-231	ENST00000521941	NBPF1	Q3BBV0	1214 aa		12.02	□□□□□ -0.49
CTNNA1-231	ENST00000521941	ORAI2	Q96SN7	254 aa		12.02	□□□□□ -0.49
CTNNA1-231	ENST00000521941	ADGRB2	O60241	1585 aa		12.01	□□□□□ -0.49
CTNNA1-231	ENST00000521941	ESCO1	Q5FWF5	840 aa		12.01	□□□□□ -0.49
CTNNA1-231	ENST00000521941	SIRT1	Q96EB6	747 aa		12	□□□□□ -0.49
CTNNA1-231	ENST00000521941	JCAD	Q9P266	1359 aa		12	□□□□□ -0.49
CTNNA1-231	ENST00000521941	SHPRH	Q149N8	1683 aa		12	□□□□□ -0.49
CTNNA1-231	ENST00000521941	PHF23	Q9BUL5	403 aa	Predicted RBP	11.99	□□□□□ -0.49
CTNNA1-231	ENST00000521941	ROCK2	O75116	1388 aa	Known RBP	11.99	□□□□□ -0.49
CTNNA1-231	ENST00000521941	KIF1A	Q12756	1690 aa		11.99	□□□□□ -0.49
CTNNA1-231	ENST00000521941	QRICH2	Q9H0J4	1663 aa		11.99	□□□□□ -0.49
CTNNA1-231	ENST00000521941	USP32	Q8NFA0	1604 aa		11.98	□□□□□ -0.49
CTNNA1-231	ENST00000521941	XPC	Q01831	940 aa	Predicted RBP	11.98	□□□□□ -0.49
CTNNA1-231	ENST00000521941	NBPF8	Q3BBV2	869 aa		11.97	□□□□□ -0.49
CTNNA1-231	ENST00000521941	TULP4	Q9NRJ4	1543 aa		11.96	□□□□□ -0.5
CTNNA1-231	ENST00000521941	NPHP3	Q7Z494	1330 aa		11.95	□□□□□ -0.5
CTNNA1-231	ENST00000521941	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.95	□□□□□ -0.5
CTNNA1-231	ENST00000521941	NUTM2E	B1AL46	878 aa	Predicted RBP	11.95	□□□□□ -0.5
CTNNA1-231	ENST00000521941	FOXO3	O43524	673 aa		11.95	□□□□□ -0.5
CTNNA1-231	ENST00000521941	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.95	□□□□□ -0.5
CTNNA1-231	ENST00000521941	CCER1	Q8TC90	406 aa	Predicted RBP	11.95	□□□□□ -0.5
CTNNA1-231	ENST00000521941	LRP6	O75581	1613 aa		11.95	□□□□□ -0.5
CTNNA1-231	ENST00000521941	ITSN1	Q15811	1721 aa		11.94	□□□□□ -0.5
CTNNA1-231	ENST00000521941	EIF3A	Q14152	1382 aa	Known RBP	11.94	□□□□□ -0.5
CTNNA1-231	ENST00000521941	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.94	□□□□□ -0.5
CTNNA1-231	ENST00000521941	WASL	O00401	505 aa	Predicted RBP	11.94	□□□□□ -0.5
CTNNA1-231	ENST00000521941	MEX3C	Q5U5Q3	659 aa	Known RBP	11.94	□□□□□ -0.5
CTNNA1-231	ENST00000521941	PMFBP1	Q8TBY8	1022 aa		11.94	□□□□□ -0.5
CTNNA1-231	ENST00000521941	RALGAPB	Q86X10	1494 aa		11.94	□□□□□ -0.5
CTNNA1-231	ENST00000521941	ANKAR	Q7Z5J8	1434 aa		11.94	□□□□□ -0.5
CTNNA1-231	ENST00000521941	PNPLA6	Q8IY17	1366 aa		11.93	□□□□□ -0.5
CTNNA1-231	ENST00000521941	PRR36	Q9H6K5	1346 aa		11.93	□□□□□ -0.5
CTNNA1-231	ENST00000521941	LRRC59	Q96AG4	307 aa	Known RBP	11.93	□□□□□ -0.5
CTNNA1-231	ENST00000521941	PHF8	Q9UPP1	1060 aa		11.93	□□□□□ -0.5
CTNNA1-231	ENST00000521941	PXDN	Q92626	1479 aa		11.93	□□□□□ -0.5
CTNNA1-231	ENST00000521941	SOS2	Q07890	1332 aa	Predicted RBP	11.92	□□□□□ -0.5
CTNNA1-231	ENST00000521941	ATP7B	P35670	1465 aa		11.92	□□□□□ -0.5
CTNNA1-231	ENST00000521941	PLEKHG5	O94827	1062 aa		11.92	□□□□□ -0.5
CTNNA1-231	ENST00000521941	CARD11	Q9BXL7	1154 aa		11.92	□□□□□ -0.5
CTNNA1-231	ENST00000521941	SPATA31A6	Q5VVP1	1343 aa		11.91	□□□□□ -0.5
CTNNA1-231	ENST00000521941	CDK19	Q9BWU1	502 aa		11.91	□□□□□ -0.5
CTNNA1-231	ENST00000521941	TOPAZ1	Q8N9V7	1692 aa		11.91	□□□□□ -0.5
CTNNA1-231	ENST00000521941	SRPK2	P78362	688 aa	Known RBP	11.9	□□□□□ -0.5
CTNNA1-231	ENST00000521941	ILDR2	Q71H61	639 aa		11.9	□□□□□ -0.5
CTNNA1-231	ENST00000521941	GPRASP1	Q5JY77	1395 aa		11.9	□□□□□ -0.5
CTNNA1-231	ENST00000521941	LMOD2	Q6P5Q4	547 aa		11.89	□□□□□ -0.51
CTNNA1-231	ENST00000521941	KRT28	Q7Z3Y7	464 aa		11.89	□□□□□ -0.51
CTNNA1-231	ENST00000521941	NUDT16	Q96DE0	195 aa	Known RBP	11.89	□□□□□ -0.51
CTNNA1-231	ENST00000521941	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.89	□□□□□ -0.51
CTNNA1-231	ENST00000521941	CLSPN	Q9HAW4	1339 aa		11.88	□□□□□ -0.51
CTNNA1-231	ENST00000521941	ADAMTS2	O95450	1211 aa		11.88	□□□□□ -0.51
CTNNA1-231	ENST00000521941	PSME1	Q06323	249 aa		11.88	□□□□□ -0.51
CTNNA1-231	ENST00000521941	NGDN	Q8NEJ9	315 aa	Known RBP	11.88	□□□□□ -0.51
CTNNA1-231	ENST00000521941	CABP2	Q9NPB3	220 aa		11.88	□□□□□ -0.51
CTNNA1-231	ENST00000521941	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.88	□□□□□ -0.51
CTNNA1-231	ENST00000521941	TNS3	Q68CZ2	1445 aa		11.87	□□□□□ -0.51
CTNNA1-231	ENST00000521941	C8orf37	Q96NL8	207 aa		11.86	□□□□□ -0.51
CTNNA1-231	ENST00000521941	ABCA3	Q99758	1704 aa		11.86	□□□□□ -0.51
CTNNA1-231	ENST00000521941	PPIP5K1	Q6PFW1	1433 aa		11.86	□□□□□ -0.51
CTNNA1-231	ENST00000521941	SPATA31A3	Q5VYP0	1347 aa		11.86	□□□□□ -0.51
CTNNA1-231	ENST00000521941	EVC2	Q86UK5	1308 aa		11.86	□□□□□ -0.51
CTNNA1-231	ENST00000521941	PAK3	O75914	559 aa	Predicted RBP	11.85	□□□□□ -0.51
CTNNA1-231	ENST00000521941	HAP1	P54257	671 aa	Predicted RBP	11.85	□□□□□ -0.51
CTNNA1-231	ENST00000521941	RGS17	Q9UGC6	210 aa	Predicted RBP	11.85	□□□□□ -0.51
CTNNA1-231	ENST00000521941	MARF1	Q9Y4F3	1742 aa	Known RBP	11.85	□□□□□ -0.51
CTNNA1-231	ENST00000521941	ALS2	Q96Q42	1657 aa		11.84	□□□□□ -0.51
CTNNA1-231	ENST00000521941	CCDC61	Q9Y6R9	512 aa		11.84	□□□□□ -0.51
CTNNA1-231	ENST00000521941	AFF2	P51816	1311 aa		11.84	□□□□□ -0.51
CTNNA1-231	ENST00000521941	SBNO1	A3KN83	1393 aa		11.83	□□□□□ -0.52
CTNNA1-231	ENST00000521941	CABLES1	Q8TDN4	633 aa		11.83	□□□□□ -0.52
CTNNA1-231	ENST00000521941	ACE	P12821	1306 aa		11.83	□□□□□ -0.52
CTNNA1-231	ENST00000521941	ARHGEF10	O15013	1369 aa		11.82	□□□□□ -0.52
CTNNA1-231	ENST00000521941	POTEA	Q6S8J7	498 aa		11.82	□□□□□ -0.52
CTNNA1-231	ENST00000521941	USP47	Q96K76	1375 aa		11.81	□□□□□ -0.52
CTNNA1-231	ENST00000521941	NGLY1	Q96IV0	654 aa		11.81	□□□□□ -0.52
CTNNA1-231	ENST00000521941	POLR3A	O14802	1390 aa	Predicted RBP	11.8	□□□□□ -0.52
CTNNA1-231	ENST00000521941	ST20-MTHFS	A0A0A6YYL1	179 aa		11.8	□□□□□ -0.52
CTNNA1-231	ENST00000521941	NUTM2G	Q5VZR2	741 aa		11.8	□□□□□ -0.52
CTNNA1-231	ENST00000521941	CABP1	Q9NZU7	370 aa		11.8	□□□□□ -0.52
CTNNA1-231	ENST00000521941	CRYBG1	Q9Y4K1	1723 aa		11.8	□□□□□ -0.52
CTNNA1-231	ENST00000521941	SBNO2	Q9Y2G9	1366 aa		11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms