RNA–Protein interactions for RNA: ENST00000521425.5

TRAM1-205, Transcript of translocation associated membrane protein 1, humanhuman

TSL 2 BASIC

Gene TRAM1, Length 3,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-205ENST00000521425 CDK19Q9BWU1 502 aa22.42■■□□□ 1.18
TRAM1-205ENST00000521425 ITPRIPQ8IWB1 547 aa22.42■■□□□ 1.18
TRAM1-205ENST00000521425 NPATQ14207 1427 aa22.42■■□□□ 1.18
TRAM1-205ENST00000521425 SLKQ9H2G2 1235 aaPredicted RBP22.42■■□□□ 1.18
TRAM1-205ENST00000521425 RRS1Q15050 365 aaKnown RBP22.41■■□□□ 1.18
TRAM1-205ENST00000521425 RUNDC1Q96C34 613 aa22.41■■□□□ 1.18
TRAM1-205ENST00000521425 C14orf37Q86TY3 774 aa22.41■■□□□ 1.18
TRAM1-205ENST00000521425 PRDM15P57071 1507 aaPredicted RBP22.4■■□□□ 1.18
TRAM1-205ENST00000521425 EXOSC9Q06265 439 aaKnown RBP22.4■■□□□ 1.18
TRAM1-205ENST00000521425 APBB1O00213 710 aa22.4■■□□□ 1.18
TRAM1-205ENST00000521425 RIPK4P57078 832 aa22.4■■□□□ 1.18
TRAM1-205ENST00000521425 CLTCL1P53675 1640 aa22.4■■□□□ 1.18
TRAM1-205ENST00000521425 ZFYVE16Q7Z3T8 1539 aa22.4■■□□□ 1.18
TRAM1-205ENST00000521425 YEATS2Q9ULM3 1422 aa22.4■■□□□ 1.18
TRAM1-205ENST00000521425 E9PCH4 1651 aa22.38■■□□□ 1.17
TRAM1-205ENST00000521425 NUTM2GQ5VZR2 741 aa22.38■■□□□ 1.17
TRAM1-205ENST00000521425 SLC26A8Q96RN1 970 aa22.37■■□□□ 1.17
TRAM1-205ENST00000521425 DCTN1Q14203 1278 aa22.36■■□□□ 1.17
TRAM1-205ENST00000521425 C1orf115Q9H7X2 142 aa22.35■■□□□ 1.17
TRAM1-205ENST00000521425 HDGFL2Q7Z4V5 671 aaPredicted RBP22.35■■□□□ 1.17
TRAM1-205ENST00000521425 ASXL1Q8IXJ9 1541 aa22.35■■□□□ 1.17
TRAM1-205ENST00000521425 EMILIN1Q9Y6C2 1016 aa22.35■■□□□ 1.17
TRAM1-205ENST00000521425 IQGAP3Q86VI3 1631 aa22.35■■□□□ 1.17
TRAM1-205ENST00000521425 CENPQQ7L2Z9 268 aaPredicted RBP22.35■■□□□ 1.17
TRAM1-205ENST00000521425 ERVK-7P63135 1459 aa22.34■■□□□ 1.17
TRAM1-205ENST00000521425 TERF2IPQ9NYB0 399 aa22.33■■□□□ 1.17
TRAM1-205ENST00000521425 NME9Q86XW9 330 aa22.33■■□□□ 1.17
TRAM1-205ENST00000521425 PODXL2Q9NZ53 605 aa22.33■■□□□ 1.16
TRAM1-205ENST00000521425 RTEL1-TNFRSF6BF6WH68 1400 aa22.33■■□□□ 1.16
TRAM1-205ENST00000521425 UNC13BO14795 1591 aa22.32■■□□□ 1.16
TRAM1-205ENST00000521425 SEC24BO95487 1268 aa22.32■■□□□ 1.16
TRAM1-205ENST00000521425 FYB1O15117 783 aa22.32■■□□□ 1.16
TRAM1-205ENST00000521425 PRKAR2BP31323 418 aa22.32■■□□□ 1.16
TRAM1-205ENST00000521425 PCDHB15Q9Y5E8 787 aa22.31■■□□□ 1.16
TRAM1-205ENST00000521425 ZNF518AQ6AHZ1 1483 aa22.31■■□□□ 1.16
TRAM1-205ENST00000521425 RARSP54136 660 aaKnown RBP22.3■■□□□ 1.16
TRAM1-205ENST00000521425 GLIPR1L2Q4G1C9 344 aa22.3■■□□□ 1.16
TRAM1-205ENST00000521425 PMFBP1Q8TBY8 1022 aa22.3■■□□□ 1.16
TRAM1-205ENST00000521425 ZMYND15Q9H091 742 aa22.3■■□□□ 1.16
TRAM1-205ENST00000521425 DIAPH1O60610 1272 aaKnown RBP22.29■■□□□ 1.16
TRAM1-205ENST00000521425 TRHP20396 242 aaPredicted RBP22.29■■□□□ 1.16
TRAM1-205ENST00000521425 FAM83GA6ND36 823 aa22.29■■□□□ 1.16
TRAM1-205ENST00000521425 PTPRTO14522 1441 aa22.29■■□□□ 1.16
TRAM1-205ENST00000521425 ZNF428Q96B54 188 aa22.28■■□□□ 1.16
TRAM1-205ENST00000521425 SHROOM2Q13796 1616 aa22.28■■□□□ 1.16
TRAM1-205ENST00000521425 BLMP54132 1417 aaPredicted RBP22.28■■□□□ 1.16
TRAM1-205ENST00000521425 LTV1Q96GA3 475 aaPredicted RBP22.27■■□□□ 1.16
TRAM1-205ENST00000521425 CLASP1Q7Z460 1538 aa22.27■■□□□ 1.16
TRAM1-205ENST00000521425 PLXNC1O60486 1568 aa22.27■■□□□ 1.16
TRAM1-205ENST00000521425 FAM161AQ3B820 660 aa22.27■■□□□ 1.16
TRAM1-205ENST00000521425 STAC3Q96MF2 364 aa22.26■■□□□ 1.15
TRAM1-205ENST00000521425 GSE1Q14687 1217 aa22.26■■□□□ 1.15
TRAM1-205ENST00000521425 NECTIN2Q92692 538 aa22.26■■□□□ 1.15
TRAM1-205ENST00000521425 POLR1AO95602 1720 aaPredicted RBP22.25■■□□□ 1.15
TRAM1-205ENST00000521425 TRPM2O94759 1503 aa22.25■■□□□ 1.15
TRAM1-205ENST00000521425 UHRF1BP1LA0JNW5 1464 aa22.25■■□□□ 1.15
TRAM1-205ENST00000521425 ZNF521Q96K83 1311 aa22.25■■□□□ 1.15
TRAM1-205ENST00000521425 MFAP1P55081 439 aaKnown RBP22.25■■□□□ 1.15
TRAM1-205ENST00000521425 A0A1W2PP64 1363 aa22.24■■□□□ 1.15
TRAM1-205ENST00000521425 TMPOP42166 694 aaKnown RBP22.24■■□□□ 1.15
TRAM1-205ENST00000521425 SSH1Q8WYL5 1049 aa22.24■■□□□ 1.15
TRAM1-205ENST00000521425 NOB1Q9ULX3 412 aaKnown RBP22.24■■□□□ 1.15
TRAM1-205ENST00000521425 MYH16Q9H6N6 1097 aa22.24■■□□□ 1.15
TRAM1-205ENST00000521425 MIS18AQ9NYP9 233 aa22.24■■□□□ 1.15
TRAM1-205ENST00000521425 PHACTR3Q96KR7 559 aa22.24■■□□□ 1.15
TRAM1-205ENST00000521425 MADDQ8WXG6 1647 aa22.22■■□□□ 1.15
TRAM1-205ENST00000521425 EIF2AK4Q9P2K8 1649 aaKnown RBP22.22■■□□□ 1.15
TRAM1-205ENST00000521425 PDZRN3Q9UPQ7 1066 aa22.22■■□□□ 1.15
TRAM1-205ENST00000521425 LMOD2Q6P5Q4 547 aa22.21■■□□□ 1.15
TRAM1-205ENST00000521425 SLC52A1Q9NWF4 448 aa22.21■■□□□ 1.15
TRAM1-205ENST00000521425 NKTRP30414 1462 aaKnown RBP22.21■■□□□ 1.15
TRAM1-205ENST00000521425 LNPKQ9C0E8 428 aa22.21■■□□□ 1.15
TRAM1-205ENST00000521425 FOXD4L1Q9NU39 408 aa22.21■■□□□ 1.15
TRAM1-205ENST00000521425 KRT24Q2M2I5 525 aa22.2■■□□□ 1.14
TRAM1-205ENST00000521425 DZIP1LQ8IYY4 767 aaKnown RBP22.2■■□□□ 1.14
TRAM1-205ENST00000521425 RSPH6AQ9H0K4 717 aa22.2■■□□□ 1.14
TRAM1-205ENST00000521425 POGZQ7Z3K3 1410 aa22.19■■□□□ 1.14
TRAM1-205ENST00000521425 C8orf34Q49A92 452 aa22.19■■□□□ 1.14
TRAM1-205ENST00000521425 ZMYM4Q5VZL5 1548 aa22.19■■□□□ 1.14
TRAM1-205ENST00000521425 ZKSCAN2Q63HK3 967 aa22.19■■□□□ 1.14
TRAM1-205ENST00000521425 MS4A1P11836 297 aa22.18■■□□□ 1.14
TRAM1-205ENST00000521425 TSPYL6Q8N831 410 aa22.16■■□□□ 1.14
TRAM1-205ENST00000521425 TMEM57Q8N5G2 664 aa22.16■■□□□ 1.14
TRAM1-205ENST00000521425 SPHKAPQ2M3C7 1700 aa22.15■■□□□ 1.14
TRAM1-205ENST00000521425 KDM2BQ8NHM5 1336 aa22.15■■□□□ 1.14
TRAM1-205ENST00000521425 TRIM27P14373 513 aa22.15■■□□□ 1.14
TRAM1-205ENST00000521425 AEBP1Q8IUX7 1158 aa22.15■■□□□ 1.14
TRAM1-205ENST00000521425 CEP152O94986 1710 aa22.15■■□□□ 1.14
TRAM1-205ENST00000521425 FRAT2O75474 233 aaPredicted RBP22.15■■□□□ 1.14
TRAM1-205ENST00000521425 A0A0U1RQG5 324 aaPredicted RBP22.14■■□□□ 1.14
TRAM1-205ENST00000521425 PIK3C2GO75747 1445 aa22.14■■□□□ 1.13
TRAM1-205ENST00000521425 NFKBIBQ15653 356 aa22.13■■□□□ 1.13
TRAM1-205ENST00000521425 NAP1L5Q96NT1 182 aaPredicted RBP22.13■■□□□ 1.13
TRAM1-205ENST00000521425 USP35Q9P2H5 1018 aa22.13■■□□□ 1.13
TRAM1-205ENST00000521425 NUDT16Q96DE0 195 aaKnown RBP22.12■■□□□ 1.13
TRAM1-205ENST00000521425 COG3Q96JB2 828 aa22.12■■□□□ 1.13
TRAM1-205ENST00000521425 GZF1Q9H116 711 aaPredicted RBP22.12■■□□□ 1.13
TRAM1-205ENST00000521425 UPF2Q9HAU5 1272 aaKnown RBP22.12■■□□□ 1.13
TRAM1-205ENST00000521425 ABCA6Q8N139 1617 aa22.12■■□□□ 1.13
TRAM1-205ENST00000521425 TRIM35Q9UPQ4 493 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms