RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 NUTM2FA1L443 756 aa17.64■□□□□ 0.41
CLK4-208ENST00000520957 MINK1Q8N4C8 1332 aaPredicted RBP17.63■□□□□ 0.41
CLK4-208ENST00000520957 CADPS2Q86UW7 1296 aa17.63■□□□□ 0.41
CLK4-208ENST00000520957 ADGRL3Q9HAR2 1447 aa17.63■□□□□ 0.41
CLK4-208ENST00000520957 GPRASP1Q5JY77 1395 aa17.62■□□□□ 0.41
CLK4-208ENST00000520957 TRPM1Q7Z4N2 1603 aa17.61■□□□□ 0.41
CLK4-208ENST00000520957 KIAA1210Q9ULL0 1709 aa17.6■□□□□ 0.41
CLK4-208ENST00000520957 DLC1Q96QB1 1528 aa17.6■□□□□ 0.41
CLK4-208ENST00000520957 RALGAPBQ86X10 1494 aa17.59■□□□□ 0.41
CLK4-208ENST00000520957 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.59■□□□□ 0.41
CLK4-208ENST00000520957 ORAI2Q96SN7 254 aa17.58■□□□□ 0.4
CLK4-208ENST00000520957 CENPJQ9HC77 1338 aaPredicted RBP17.57■□□□□ 0.4
CLK4-208ENST00000520957 KNDC1Q76NI1 1749 aa17.57■□□□□ 0.4
CLK4-208ENST00000520957 NALCNQ8IZF0 1738 aa17.56■□□□□ 0.4
CLK4-208ENST00000520957 MST1RQ04912 1400 aa17.56■□□□□ 0.4
CLK4-208ENST00000520957 BRINP3Q76B58 766 aa17.55■□□□□ 0.4
CLK4-208ENST00000520957 DCCP43146 1447 aa17.55■□□□□ 0.4
CLK4-208ENST00000520957 WASLO00401 505 aaPredicted RBP17.55■□□□□ 0.4
CLK4-208ENST00000520957 DDX17Q92841 729 aaKnown RBP17.55■□□□□ 0.4
CLK4-208ENST00000520957 ST20-MTHFSA0A0A6YYL1 179 aa17.54■□□□□ 0.4
CLK4-208ENST00000520957 HSPA1LP34931 641 aa17.54■□□□□ 0.4
CLK4-208ENST00000520957 CDK19Q9BWU1 502 aa17.54■□□□□ 0.4
CLK4-208ENST00000520957 ESCO1Q5FWF5 840 aa17.53■□□□□ 0.4
CLK4-208ENST00000520957 C1orf167Q5SNV9 1468 aa17.53■□□□□ 0.4
CLK4-208ENST00000520957 ARHGEF28Q8N1W1 1705 aaKnown RBP17.52■□□□□ 0.4
CLK4-208ENST00000520957 PRR36Q9H6K5 1346 aa17.51■□□□□ 0.39
CLK4-208ENST00000520957 CABP2Q9NPB3 220 aa17.5■□□□□ 0.39
CLK4-208ENST00000520957 USP47Q96K76 1375 aa17.49■□□□□ 0.39
CLK4-208ENST00000520957 TESK2Q96S53 571 aa17.48■□□□□ 0.39
CLK4-208ENST00000520957 EIF3AQ14152 1382 aaKnown RBP17.48■□□□□ 0.39
CLK4-208ENST00000520957 CDC42BPGQ6DT37 1551 aa17.48■□□□□ 0.39
CLK4-208ENST00000520957 FOXO3O43524 673 aa17.48■□□□□ 0.39
CLK4-208ENST00000520957 PMFBP1Q8TBY8 1022 aa17.48■□□□□ 0.39
CLK4-208ENST00000520957 NUDT16Q96DE0 195 aaKnown RBP17.48■□□□□ 0.39
CLK4-208ENST00000520957 SRPK2P78362 688 aaKnown RBP17.47■□□□□ 0.39
CLK4-208ENST00000520957 XPCQ01831 940 aaPredicted RBP17.46■□□□□ 0.39
CLK4-208ENST00000520957 ROBO1Q9Y6N7 1651 aa17.45■□□□□ 0.38
CLK4-208ENST00000520957 HSPA5P11021 654 aaKnown RBP17.44■□□□□ 0.38
CLK4-208ENST00000520957 PHF8Q9UPP1 1060 aa17.44■□□□□ 0.38
CLK4-208ENST00000520957 EVC2Q86UK5 1308 aa17.43■□□□□ 0.38
CLK4-208ENST00000520957 ADGRB2O60241 1585 aa17.43■□□□□ 0.38
CLK4-208ENST00000520957 CCDC61Q9Y6R9 512 aa17.42■□□□□ 0.38
CLK4-208ENST00000520957 TULP4Q9NRJ4 1543 aa17.42■□□□□ 0.38
CLK4-208ENST00000520957 EIF4G2P78344 907 aaKnown RBP eCLIP17.42■□□□□ 0.38
CLK4-208ENST00000520957 FMN2Q9NZ56 1722 aa17.41■□□□□ 0.38
CLK4-208ENST00000520957 CABP1Q9NZU7 370 aa17.41■□□□□ 0.38
CLK4-208ENST00000520957 QRICH2Q9H0J4 1663 aa17.41■□□□□ 0.38
CLK4-208ENST00000520957 ANKARQ7Z5J8 1434 aa17.4■□□□□ 0.38
CLK4-208ENST00000520957 SBNO2Q9Y2G9 1366 aa17.4■□□□□ 0.38
CLK4-208ENST00000520957 USP32Q8NFA0 1604 aa17.4■□□□□ 0.38
CLK4-208ENST00000520957 ATP7BP35670 1465 aa17.4■□□□□ 0.38
CLK4-208ENST00000520957 KRT28Q7Z3Y7 464 aa17.38■□□□□ 0.37
CLK4-208ENST00000520957 NGDNQ8NEJ9 315 aaKnown RBP17.38■□□□□ 0.37
CLK4-208ENST00000520957 DISP3Q9P2K9 1392 aa17.38■□□□□ 0.37
CLK4-208ENST00000520957 SOS2Q07890 1332 aaPredicted RBP17.37■□□□□ 0.37
CLK4-208ENST00000520957 PSME1Q06323 249 aa17.37■□□□□ 0.37
CLK4-208ENST00000520957 ACEP12821 1306 aa17.37■□□□□ 0.37
CLK4-208ENST00000520957 NPHP3Q7Z494 1330 aa17.37■□□□□ 0.37
CLK4-208ENST00000520957 PLEKHG3A1L390 1219 aa17.36■□□□□ 0.37
CLK4-208ENST00000520957 RGPD8O14715 1765 aaPredicted RBP17.36■□□□□ 0.37
CLK4-208ENST00000520957 C11orf95C9JLR9 678 aaPredicted RBP17.36■□□□□ 0.37
CLK4-208ENST00000520957 SLC12A5Q9H2X9 1139 aa17.36■□□□□ 0.37
CLK4-208ENST00000520957 TMF1P82094 1093 aa17.35■□□□□ 0.37
CLK4-208ENST00000520957 PPIP5K1Q6PFW1 1433 aa17.34■□□□□ 0.37
CLK4-208ENST00000520957 TMC1Q8TDI8 760 aa17.34■□□□□ 0.37
CLK4-208ENST00000520957 LRRC59Q96AG4 307 aaKnown RBP17.34■□□□□ 0.37
CLK4-208ENST00000520957 AHDC1Q5TGY3 1603 aaPredicted RBP17.33■□□□□ 0.37
CLK4-208ENST00000520957 PXDNQ92626 1479 aa17.32■□□□□ 0.36
CLK4-208ENST00000520957 PLEKHG5O94827 1062 aa17.32■□□□□ 0.36
CLK4-208ENST00000520957 PHLPP1O60346 1717 aa17.31■□□□□ 0.36
CLK4-208ENST00000520957 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
CLK4-208ENST00000520957 COL16A1Q07092 1604 aaPredicted RBP17.31■□□□□ 0.36
CLK4-208ENST00000520957 PAK3O75914 559 aaPredicted RBP17.3■□□□□ 0.36
CLK4-208ENST00000520957 LMOD2Q6P5Q4 547 aa17.3■□□□□ 0.36
CLK4-208ENST00000520957 POLR3GLQ9BT43 218 aa17.3■□□□□ 0.36
CLK4-208ENST00000520957 POLR3AO14802 1390 aaPredicted RBP17.3■□□□□ 0.36
CLK4-208ENST00000520957 ATAD2Q6PL18 1390 aa17.3■□□□□ 0.36
CLK4-208ENST00000520957 PUS7Q96PZ0 661 aaKnown RBP17.29■□□□□ 0.36
CLK4-208ENST00000520957 SPATA31A3Q5VYP0 1347 aa17.29■□□□□ 0.36
CLK4-208ENST00000520957 NHSL1Q5SYE7 1610 aa17.29■□□□□ 0.36
CLK4-208ENST00000520957 JCADQ9P266 1359 aa17.29■□□□□ 0.36
CLK4-208ENST00000520957 NUTM2BA6NNL0 878 aaPredicted RBP17.27■□□□□ 0.36
CLK4-208ENST00000520957 NUTM2EB1AL46 878 aaPredicted RBP17.27■□□□□ 0.36
CLK4-208ENST00000520957 NUTM2GQ5VZR2 741 aa17.27■□□□□ 0.36
CLK4-208ENST00000520957 NUTM2AQ8IVF1 878 aaPredicted RBP17.27■□□□□ 0.36
CLK4-208ENST00000520957 PNPLA6Q8IY17 1366 aa17.26■□□□□ 0.35
CLK4-208ENST00000520957 CABLES1Q8TDN4 633 aa17.26■□□□□ 0.35
CLK4-208ENST00000520957 ZEB1P37275 1124 aaPredicted RBP17.26■□□□□ 0.35
CLK4-208ENST00000520957 KIF1AQ12756 1690 aa17.25■□□□□ 0.35
CLK4-208ENST00000520957 CDCA8Q53HL2 280 aa17.25■□□□□ 0.35
CLK4-208ENST00000520957 SBNO1A3KN83 1393 aa17.24■□□□□ 0.35
CLK4-208ENST00000520957 TOPAZ1Q8N9V7 1692 aa17.24■□□□□ 0.35
CLK4-208ENST00000520957 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
CLK4-208ENST00000520957 CD163L1Q9NR16 1453 aa17.24■□□□□ 0.35
CLK4-208ENST00000520957 CPSF1Q10570 1443 aaKnown RBP17.24■□□□□ 0.35
CLK4-208ENST00000520957 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.23■□□□□ 0.35
CLK4-208ENST00000520957 USP6P35125 1406 aa17.22■□□□□ 0.35
CLK4-208ENST00000520957 KTN1Q86UP2 1357 aaKnown RBP17.22■□□□□ 0.35
CLK4-208ENST00000520957 ABTB2Q8N961 1025 aa17.22■□□□□ 0.35
CLK4-208ENST00000520957 TNS3Q68CZ2 1445 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms