RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 PLEKHH1Q9ULM0 1364 aa12.43□□□□□ -0.42
CSMD1-208ENST00000520561 ADGRB2O60241 1585 aa12.43□□□□□ -0.42
CSMD1-208ENST00000520561 EVC2Q86UK5 1308 aa12.43□□□□□ -0.42
CSMD1-208ENST00000520561 MINK1Q8N4C8 1332 aaPredicted RBP12.42□□□□□ -0.42
CSMD1-208ENST00000520561 C11orf95C9JLR9 678 aaPredicted RBP12.42□□□□□ -0.42
CSMD1-208ENST00000520561 KCNA6P17658 529 aa12.42□□□□□ -0.42
CSMD1-208ENST00000520561 WAPLQ7Z5K2 1190 aa12.42□□□□□ -0.42
CSMD1-208ENST00000520561 DDX10Q13206 875 aaKnown RBP12.4□□□□□ -0.42
CSMD1-208ENST00000520561 DMRT2Q9Y5R5 561 aa12.4□□□□□ -0.42
CSMD1-208ENST00000520561 MYOM1P52179 1685 aa12.39□□□□□ -0.43
CSMD1-208ENST00000520561 DIEXFQ68CQ4 756 aaKnown RBP12.39□□□□□ -0.43
CSMD1-208ENST00000520561 AEBP2Q6ZN18 517 aaPredicted RBP12.39□□□□□ -0.43
CSMD1-208ENST00000520561 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.39□□□□□ -0.43
CSMD1-208ENST00000520561 NALCNQ8IZF0 1738 aa12.38□□□□□ -0.43
CSMD1-208ENST00000520561 SRPK2P78362 688 aaKnown RBP12.38□□□□□ -0.43
CSMD1-208ENST00000520561 ATAD2Q6PL18 1390 aa12.38□□□□□ -0.43
CSMD1-208ENST00000520561 PUS7Q96PZ0 661 aaKnown RBP12.37□□□□□ -0.43
CSMD1-208ENST00000520561 NINLQ9Y2I6 1382 aa12.37□□□□□ -0.43
CSMD1-208ENST00000520561 CDC42BPGQ6DT37 1551 aa12.37□□□□□ -0.43
CSMD1-208ENST00000520561 ADGRL3Q9HAR2 1447 aa12.37□□□□□ -0.43
CSMD1-208ENST00000520561 STRCP1A6NGW2 1772 aa12.35□□□□□ -0.43
CSMD1-208ENST00000520561 WASLO00401 505 aaPredicted RBP12.35□□□□□ -0.43
CSMD1-208ENST00000520561 CDK19Q9BWU1 502 aa12.35□□□□□ -0.43
CSMD1-208ENST00000520561 CABP2Q9NPB3 220 aa12.35□□□□□ -0.43
CSMD1-208ENST00000520561 C14orf37Q86TY3 774 aa12.34□□□□□ -0.43
CSMD1-208ENST00000520561 PROSER2Q86WR7 435 aaPredicted RBP12.34□□□□□ -0.43
CSMD1-208ENST00000520561 FMN2Q9NZ56 1722 aa12.34□□□□□ -0.43
CSMD1-208ENST00000520561 NCOA3Q9Y6Q9 1424 aa12.33□□□□□ -0.44
CSMD1-208ENST00000520561 ITSN1Q15811 1721 aa12.33□□□□□ -0.44
CSMD1-208ENST00000520561 ZNF335Q9H4Z2 1342 aaPredicted RBP12.33□□□□□ -0.44
CSMD1-208ENST00000520561 ATP7BP35670 1465 aa12.33□□□□□ -0.44
CSMD1-208ENST00000520561 TOPAZ1Q8N9V7 1692 aa12.32□□□□□ -0.44
CSMD1-208ENST00000520561 ANKARQ7Z5J8 1434 aa12.32□□□□□ -0.44
CSMD1-208ENST00000520561 TMC1Q8TDI8 760 aa12.32□□□□□ -0.44
CSMD1-208ENST00000520561 TMEM94Q12767 1356 aa12.31□□□□□ -0.44
CSMD1-208ENST00000520561 DCCP43146 1447 aa12.3□□□□□ -0.44
CSMD1-208ENST00000520561 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
CSMD1-208ENST00000520561 LRRC7Q96NW7 1537 aa12.3□□□□□ -0.44
CSMD1-208ENST00000520561 ANKRD36BQ8N2N9 1353 aa12.3□□□□□ -0.44
CSMD1-208ENST00000520561 USP32Q8NFA0 1604 aa12.29□□□□□ -0.44
CSMD1-208ENST00000520561 NUDT16Q96DE0 195 aaKnown RBP12.29□□□□□ -0.44
CSMD1-208ENST00000520561 RBM33Q96EV2 1170 aaKnown RBP12.29□□□□□ -0.44
CSMD1-208ENST00000520561 PANK3Q9H999 370 aa12.29□□□□□ -0.44
CSMD1-208ENST00000520561 MSH6P52701 1360 aa12.29□□□□□ -0.44
CSMD1-208ENST00000520561 ANP32CO43423 234 aa12.28□□□□□ -0.44
CSMD1-208ENST00000520561 HDGFL2Q7Z4V5 671 aaPredicted RBP12.28□□□□□ -0.44
CSMD1-208ENST00000520561 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
CSMD1-208ENST00000520561 SLC12A5Q9H2X9 1139 aa12.27□□□□□ -0.45
CSMD1-208ENST00000520561 TERF2IPQ9NYB0 399 aa12.27□□□□□ -0.45
CSMD1-208ENST00000520561 PRR36Q9H6K5 1346 aa12.27□□□□□ -0.45
CSMD1-208ENST00000520561 XIRP1Q702N8 1843 aaKnown RBP12.27□□□□□ -0.45
CSMD1-208ENST00000520561 NSD3Q9BZ95 1437 aa12.27□□□□□ -0.45
CSMD1-208ENST00000520561 NUTM2FA1L443 756 aa12.26□□□□□ -0.45
CSMD1-208ENST00000520561 C19orf44Q9H6X5 657 aa12.26□□□□□ -0.45
CSMD1-208ENST00000520561 KNSTRNQ9Y448 316 aa12.26□□□□□ -0.45
CSMD1-208ENST00000520561 A0A1W2PP64 1363 aa12.26□□□□□ -0.45
CSMD1-208ENST00000520561 AKAP12Q02952 1782 aa12.25□□□□□ -0.45
CSMD1-208ENST00000520561 ATF3P18847 181 aa12.25□□□□□ -0.45
CSMD1-208ENST00000520561 CABP1Q9NZU7 370 aa12.25□□□□□ -0.45
CSMD1-208ENST00000520561 CD163L1Q9NR16 1453 aa12.25□□□□□ -0.45
CSMD1-208ENST00000520561 KIF1AQ12756 1690 aa12.25□□□□□ -0.45
CSMD1-208ENST00000520561 MON2Q7Z3U7 1717 aa12.25□□□□□ -0.45
CSMD1-208ENST00000520561 KTN1Q86UP2 1357 aaKnown RBP12.24□□□□□ -0.45
CSMD1-208ENST00000520561 CADPS2Q86UW7 1296 aa12.24□□□□□ -0.45
CSMD1-208ENST00000520561 LTBP4Q8N2S1 1624 aa12.24□□□□□ -0.45
CSMD1-208ENST00000520561 RGPD8O14715 1765 aaPredicted RBP12.23□□□□□ -0.45
CSMD1-208ENST00000520561 NRKQ7Z2Y5 1582 aa12.22□□□□□ -0.45
CSMD1-208ENST00000520561 C1orf167Q5SNV9 1468 aa12.22□□□□□ -0.45
CSMD1-208ENST00000520561 MST1RQ04912 1400 aa12.22□□□□□ -0.45
CSMD1-208ENST00000520561 CPSF1Q10570 1443 aaKnown RBP12.22□□□□□ -0.45
CSMD1-208ENST00000520561 EDC4Q6P2E9 1401 aaKnown RBP12.22□□□□□ -0.45
CSMD1-208ENST00000520561 NPC1L1Q9UHC9 1359 aa12.22□□□□□ -0.45
CSMD1-208ENST00000520561 PLEKHG3A1L390 1219 aa12.22□□□□□ -0.45
CSMD1-208ENST00000520561 PER1O15534 1290 aaPredicted RBP12.22□□□□□ -0.45
CSMD1-208ENST00000520561 POLR3AO14802 1390 aaPredicted RBP12.21□□□□□ -0.45
CSMD1-208ENST00000520561 NSD2O96028 1365 aa12.21□□□□□ -0.45
CSMD1-208ENST00000520561 KIF20BQ96Q89 1820 aa12.21□□□□□ -0.45
CSMD1-208ENST00000520561 CGNL1Q0VF96 1302 aa12.21□□□□□ -0.45
CSMD1-208ENST00000520561 NGDNQ8NEJ9 315 aaKnown RBP12.21□□□□□ -0.45
CSMD1-208ENST00000520561 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
CSMD1-208ENST00000520561 CARD14Q9BXL6 1004 aa12.21□□□□□ -0.45
CSMD1-208ENST00000520561 USP6P35125 1406 aa12.2□□□□□ -0.46
CSMD1-208ENST00000520561 ACEP12821 1306 aa12.2□□□□□ -0.46
CSMD1-208ENST00000520561 CNGB1Q14028 1251 aaPredicted RBP12.2□□□□□ -0.46
CSMD1-208ENST00000520561 CC2D1BQ5T0F9 858 aaKnown RBP12.2□□□□□ -0.46
CSMD1-208ENST00000520561 MIER1Q8N108 512 aa12.2□□□□□ -0.46
CSMD1-208ENST00000520561 PRKRIP1Q9H875 184 aaPredicted RBP12.2□□□□□ -0.46
CSMD1-208ENST00000520561 PHF8Q9UPP1 1060 aa12.2□□□□□ -0.46
CSMD1-208ENST00000520561 ESCO1Q5FWF5 840 aa12.19□□□□□ -0.46
CSMD1-208ENST00000520561 AMER1Q5JTC6 1135 aaPredicted RBP12.19□□□□□ -0.46
CSMD1-208ENST00000520561 PMFBP1Q8TBY8 1022 aa12.19□□□□□ -0.46
CSMD1-208ENST00000520561 ANKRD26Q9UPS8 1709 aa12.19□□□□□ -0.46
CSMD1-208ENST00000520561 PARD3Q8TEW0 1356 aa12.18□□□□□ -0.46
CSMD1-208ENST00000520561 RALBP1Q15311 655 aa12.18□□□□□ -0.46
CSMD1-208ENST00000520561 BRD4O60885 1362 aaPredicted RBP12.18□□□□□ -0.46
CSMD1-208ENST00000520561 MYBBP1AQ9BQG0 1328 aaKnown RBP12.16□□□□□ -0.46
CSMD1-208ENST00000520561 IQSEC2Q5JU85 1478 aa12.15□□□□□ -0.46
CSMD1-208ENST00000520561 TTC21AQ8NDW8 1320 aa12.15□□□□□ -0.46
CSMD1-208ENST00000520561 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.15□□□□□ -0.46
CSMD1-208ENST00000520561 ORAI2Q96SN7 254 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms