RNA–Protein interactions for RNA: ENST00000515815.5

SDHA-219, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-219ENST00000515815 ABCA3Q99758 1704 aa17.75■□□□□ 0.43
SDHA-219ENST00000515815 LRPPRCP42704 1394 aaKnown RBP17.75■□□□□ 0.43
SDHA-219ENST00000515815 BRINP3Q76B58 766 aa17.73■□□□□ 0.43
SDHA-219ENST00000515815 USP32Q8NFA0 1604 aa17.72■□□□□ 0.43
SDHA-219ENST00000515815 SPATA31A6Q5VVP1 1343 aa17.7■□□□□ 0.42
SDHA-219ENST00000515815 SOCS7O14512 581 aa17.69■□□□□ 0.42
SDHA-219ENST00000515815 TOPAZ1Q8N9V7 1692 aa17.67■□□□□ 0.42
SDHA-219ENST00000515815 QRICH2Q9H0J4 1663 aa17.67■□□□□ 0.42
SDHA-219ENST00000515815 ABCC11Q96J66 1382 aa17.67■□□□□ 0.42
SDHA-219ENST00000515815 HRCP23327 699 aa17.67■□□□□ 0.42
SDHA-219ENST00000515815 PLEKHH1Q9ULM0 1364 aa17.66■□□□□ 0.42
SDHA-219ENST00000515815 TRPM1Q7Z4N2 1603 aa17.65■□□□□ 0.42
SDHA-219ENST00000515815 PXDNQ92626 1479 aa17.65■□□□□ 0.42
SDHA-219ENST00000515815 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.65■□□□□ 0.42
SDHA-219ENST00000515815 DHX57Q6P158 1386 aaKnown RBP17.65■□□□□ 0.42
SDHA-219ENST00000515815 TRPM3Q9HCF6 1732 aaPredicted RBP17.64■□□□□ 0.41
SDHA-219ENST00000515815 STK26Q9P289 416 aa17.64■□□□□ 0.41
SDHA-219ENST00000515815 PNPLA6Q8IY17 1366 aa17.64■□□□□ 0.41
SDHA-219ENST00000515815 PLCH1Q4KWH8 1693 aa17.63■□□□□ 0.41
SDHA-219ENST00000515815 MEX3CQ5U5Q3 659 aaKnown RBP17.62■□□□□ 0.41
SDHA-219ENST00000515815 TMEM132EQ6IEE7 984 aa17.62■□□□□ 0.41
SDHA-219ENST00000515815 TULP4Q9NRJ4 1543 aa17.62■□□□□ 0.41
SDHA-219ENST00000515815 C14orf93Q9H972 538 aaKnown RBP17.61■□□□□ 0.41
SDHA-219ENST00000515815 CRYBG1Q9Y4K1 1723 aa17.61■□□□□ 0.41
SDHA-219ENST00000515815 ALS2Q96Q42 1657 aa17.6■□□□□ 0.41
SDHA-219ENST00000515815 CFAP70Q5T0N1 1121 aa17.59■□□□□ 0.41
SDHA-219ENST00000515815 ANKARQ7Z5J8 1434 aa17.58■□□□□ 0.41
SDHA-219ENST00000515815 NPHP3Q7Z494 1330 aa17.57■□□□□ 0.4
SDHA-219ENST00000515815 WAPLQ7Z5K2 1190 aa17.57■□□□□ 0.4
SDHA-219ENST00000515815 DDX17Q92841 729 aaKnown RBP17.57■□□□□ 0.4
SDHA-219ENST00000515815 RGS17Q9UGC6 210 aaPredicted RBP17.57■□□□□ 0.4
SDHA-219ENST00000515815 NWD2Q9ULI1 1742 aa17.57■□□□□ 0.4
SDHA-219ENST00000515815 EIF3AQ14152 1382 aaKnown RBP17.56■□□□□ 0.4
SDHA-219ENST00000515815 DCAF11Q8TEB1 546 aa17.56■□□□□ 0.4
SDHA-219ENST00000515815 LRRC59Q96AG4 307 aaKnown RBP17.56■□□□□ 0.4
SDHA-219ENST00000515815 ORAI2Q96SN7 254 aa17.56■□□□□ 0.4
SDHA-219ENST00000515815 PHRF1Q9P1Y6 1649 aaKnown RBP17.55■□□□□ 0.4
SDHA-219ENST00000515815 SOS2Q07890 1332 aaPredicted RBP17.55■□□□□ 0.4
SDHA-219ENST00000515815 NUTM2BA6NNL0 878 aaPredicted RBP17.53■□□□□ 0.4
SDHA-219ENST00000515815 NUTM2EB1AL46 878 aaPredicted RBP17.53■□□□□ 0.4
SDHA-219ENST00000515815 ESCO1Q5FWF5 840 aa17.53■□□□□ 0.4
SDHA-219ENST00000515815 NUTM2AQ8IVF1 878 aaPredicted RBP17.53■□□□□ 0.4
SDHA-219ENST00000515815 STAC3Q96MF2 364 aa17.53■□□□□ 0.4
SDHA-219ENST00000515815 KDM2AQ9Y2K7 1162 aa17.53■□□□□ 0.4
SDHA-219ENST00000515815 ATP7BP35670 1465 aa17.52■□□□□ 0.4
SDHA-219ENST00000515815 SIRT1Q96EB6 747 aa17.52■□□□□ 0.4
SDHA-219ENST00000515815 PRAM1Q96QH2 718 aa17.52■□□□□ 0.4
SDHA-219ENST00000515815 TNS3Q68CZ2 1445 aa17.52■□□□□ 0.4
SDHA-219ENST00000515815 NRAPQ86VF7 1730 aa17.52■□□□□ 0.39
SDHA-219ENST00000515815 CDK12Q9NYV4 1490 aaPredicted RBP17.51■□□□□ 0.39
SDHA-219ENST00000515815 NUTM2FA1L443 756 aa17.51■□□□□ 0.39
SDHA-219ENST00000515815 SAFB2Q14151 953 aaKnown RBP eCLIP17.5■□□□□ 0.393e-7■□□□□ 9.3
SDHA-219ENST00000515815 ZNF772Q68DY9 489 aaPredicted RBP17.5■□□□□ 0.39
SDHA-219ENST00000515815 POTEAQ6S8J7 498 aa17.5■□□□□ 0.39
SDHA-219ENST00000515815 POGKQ9P215 609 aa17.5■□□□□ 0.39
SDHA-219ENST00000515815 TRAK1Q9UPV9 953 aa17.48■□□□□ 0.39
SDHA-219ENST00000515815 AFF2P51816 1311 aa17.47■□□□□ 0.39
SDHA-219ENST00000515815 AKAP12Q02952 1782 aa17.46■□□□□ 0.39
SDHA-219ENST00000515815 COL14A1Q05707 1796 aaKnown RBP17.46■□□□□ 0.39
SDHA-219ENST00000515815 C8orf37Q96NL8 207 aa17.46■□□□□ 0.39
SDHA-219ENST00000515815 XPCQ01831 940 aaPredicted RBP17.45■□□□□ 0.38
SDHA-219ENST00000515815 RGS12O14924 1447 aa17.45■□□□□ 0.38
SDHA-219ENST00000515815 MINK1Q8N4C8 1332 aaPredicted RBP17.45■□□□□ 0.38
SDHA-219ENST00000515815 FOXO3O43524 673 aa17.44■□□□□ 0.38
SDHA-219ENST00000515815 BRWD3Q6RI45 1802 aa17.43■□□□□ 0.38
SDHA-219ENST00000515815 PHF8Q9UPP1 1060 aa17.43■□□□□ 0.38
SDHA-219ENST00000515815 ARHGEF10O15013 1369 aa17.42■□□□□ 0.38
SDHA-219ENST00000515815 ADAMTS2O95450 1211 aa17.42■□□□□ 0.38
SDHA-219ENST00000515815 HIRIP3Q9BW71 556 aaPredicted RBP17.42■□□□□ 0.38
SDHA-219ENST00000515815 SBNO1A3KN83 1393 aa17.41■□□□□ 0.38
SDHA-219ENST00000515815 NRKQ7Z2Y5 1582 aa17.41■□□□□ 0.38
SDHA-219ENST00000515815 GLI3P10071 1580 aa17.4■□□□□ 0.38
SDHA-219ENST00000515815 MON2Q7Z3U7 1717 aa17.4■□□□□ 0.38
SDHA-219ENST00000515815 SPATA31A3Q5VYP0 1347 aa17.4■□□□□ 0.38
SDHA-219ENST00000515815 ATRNO75882 1429 aa17.38■□□□□ 0.37
SDHA-219ENST00000515815 PRR36Q9H6K5 1346 aa17.38■□□□□ 0.37
SDHA-219ENST00000515815 GPRASP1Q5JY77 1395 aa17.37■□□□□ 0.37
SDHA-219ENST00000515815 RALGAPBQ86X10 1494 aa17.37■□□□□ 0.37
SDHA-219ENST00000515815 SLIT2O94813 1529 aa17.37■□□□□ 0.37
SDHA-219ENST00000515815 WNK3Q9BYP7 1800 aa17.36■□□□□ 0.37
SDHA-219ENST00000515815 WASLO00401 505 aaPredicted RBP17.36■□□□□ 0.37
SDHA-219ENST00000515815 KRT28Q7Z3Y7 464 aa17.36■□□□□ 0.37
SDHA-219ENST00000515815 NGLY1Q96IV0 654 aa17.36■□□□□ 0.37
SDHA-219ENST00000515815 PIK3C2AO00443 1686 aa17.36■□□□□ 0.37
SDHA-219ENST00000515815 RXRBP28702 533 aa17.35■□□□□ 0.37
SDHA-219ENST00000515815 PSME1Q06323 249 aa17.35■□□□□ 0.37
SDHA-219ENST00000515815 ROCK2O75116 1388 aaKnown RBP17.35■□□□□ 0.37
SDHA-219ENST00000515815 HAP1P54257 671 aaPredicted RBP17.34■□□□□ 0.37
SDHA-219ENST00000515815 BCL9LQ86UU0 1499 aa17.34■□□□□ 0.37
SDHA-219ENST00000515815 PMFBP1Q8TBY8 1022 aa17.34■□□□□ 0.37
SDHA-219ENST00000515815 USP21Q9UK80 565 aa17.34■□□□□ 0.37
SDHA-219ENST00000515815 CENPJQ9HC77 1338 aaPredicted RBP17.33■□□□□ 0.36
SDHA-219ENST00000515815 TONSLQ96HA7 1378 aa17.32■□□□□ 0.36
SDHA-219ENST00000515815 PPIP5K1Q6PFW1 1433 aa17.31■□□□□ 0.36
SDHA-219ENST00000515815 RBM6P78332 1123 aaKnown RBP17.31■□□□□ 0.36
SDHA-219ENST00000515815 L3MBTL2Q969R5 705 aa17.31■□□□□ 0.36
SDHA-219ENST00000515815 SIN3AQ96ST3 1273 aa17.31■□□□□ 0.36
SDHA-219ENST00000515815 TRPC5Q9UL62 973 aaPredicted RBP17.31■□□□□ 0.36
SDHA-219ENST00000515815 USP54Q70EL1 1684 aa17.31■□□□□ 0.36
SDHA-219ENST00000515815 POLR3AO14802 1390 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms