RNA–Protein interactions for RNA: ENST00000515421.1

CDV3-209, Transcript of CDV3 homolog, humanhuman

TSL 3 BASIC

Gene CDV3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-209ENST00000515421 TSPY10P0CW01 314 aa12.59□□□□□ -0.39
CDV3-209ENST00000515421 CHRDL2Q6WN34 429 aa12.59□□□□□ -0.39
CDV3-209ENST00000515421 SUPT6HQ7KZ85 1726 aaKnown RBP12.58□□□□□ -0.4
CDV3-209ENST00000515421 DISP3Q9P2K9 1392 aa12.58□□□□□ -0.4
CDV3-209ENST00000515421 KIF3BO15066 747 aa12.58□□□□□ -0.4
CDV3-209ENST00000515421 ZNF579Q8NAF0 562 aaKnown RBP12.58□□□□□ -0.4
CDV3-209ENST00000515421 CCDC141Q6ZP82 1450 aa12.58□□□□□ -0.4
CDV3-209ENST00000515421 ADGBQ8N7X0 1667 aa12.58□□□□□ -0.4
CDV3-209ENST00000515421 TCOF1Q13428 1488 aaKnown RBP12.57□□□□□ -0.4
CDV3-209ENST00000515421 IRF6O14896 467 aa12.57□□□□□ -0.4
CDV3-209ENST00000515421 CLEC11AQ9Y240 323 aa12.57□□□□□ -0.4
CDV3-209ENST00000515421 WASHC2CQ9Y4E1 1318 aa12.57□□□□□ -0.4
CDV3-209ENST00000515421 CEP170BQ9Y4F5 1589 aaPredicted RBP12.56□□□□□ -0.4
CDV3-209ENST00000515421 A2ML1A8K2U0 1454 aa12.56□□□□□ -0.4
CDV3-209ENST00000515421 NCOA2Q15596 1464 aa12.56□□□□□ -0.4
CDV3-209ENST00000515421 CLTCQ00610 1675 aaKnown RBP12.55□□□□□ -0.4
CDV3-209ENST00000515421 TNRQ92752 1358 aa12.55□□□□□ -0.4
CDV3-209ENST00000515421 SPDYE16A6NNV3 312 aaPredicted RBP12.55□□□□□ -0.4
CDV3-209ENST00000515421 ZNF428Q96B54 188 aa12.55□□□□□ -0.4
CDV3-209ENST00000515421 ZNF335Q9H4Z2 1342 aaPredicted RBP12.55□□□□□ -0.4
CDV3-209ENST00000515421 MYO3AQ8NEV4 1616 aa12.54□□□□□ -0.4
CDV3-209ENST00000515421 ZNF142P52746 1687 aaPredicted RBP12.54□□□□□ -0.4
CDV3-209ENST00000515421 E9PSI1 815 aa12.54□□□□□ -0.4
CDV3-209ENST00000515421 UBAP1LF5GYI3 381 aa12.54□□□□□ -0.4
CDV3-209ENST00000515421 IRF5Q13568 498 aa12.54□□□□□ -0.4
CDV3-209ENST00000515421 THEMISQ8N1K5 641 aaPredicted RBP12.54□□□□□ -0.4
CDV3-209ENST00000515421 FBXW7Q969H0 707 aa12.54□□□□□ -0.4
CDV3-209ENST00000515421 CAMSAP2Q08AD1 1489 aa12.54□□□□□ -0.4
CDV3-209ENST00000515421 PZPP20742 1482 aa12.53□□□□□ -0.4
CDV3-209ENST00000515421 KDM5DQ9BY66 1539 aa12.53□□□□□ -0.4
CDV3-209ENST00000515421 PATL2C9JE40 543 aaKnown RBP12.52□□□□□ -0.41
CDV3-209ENST00000515421 PDIA6Q15084 440 aa12.52□□□□□ -0.41
CDV3-209ENST00000515421 ANKLE2Q86XL3 938 aa12.52□□□□□ -0.41
CDV3-209ENST00000515421 SP7Q8TDD2 431 aaPredicted RBP12.52□□□□□ -0.41
CDV3-209ENST00000515421 CABP2Q9NPB3 220 aa12.52□□□□□ -0.41
CDV3-209ENST00000515421 PLSCR2Q9NRY7 297 aa12.52□□□□□ -0.41
CDV3-209ENST00000515421 NLRP1Q9C000 1473 aa12.51□□□□□ -0.41
CDV3-209ENST00000515421 SOCS7O14512 581 aa12.51□□□□□ -0.41
CDV3-209ENST00000515421 TTLL12Q14166 644 aaPredicted RBP12.51□□□□□ -0.41
CDV3-209ENST00000515421 ARHGEF5Q12774 1597 aa12.5□□□□□ -0.41
CDV3-209ENST00000515421 VPS8Q8N3P4 1428 aa12.5□□□□□ -0.41
CDV3-209ENST00000515421 MIA2Q96PC5 1412 aa12.5□□□□□ -0.41
CDV3-209ENST00000515421 MYT1Q01538 1121 aa12.5□□□□□ -0.41
CDV3-209ENST00000515421 PDE4CQ08493 712 aa12.5□□□□□ -0.41
CDV3-209ENST00000515421 FBXO31Q5XUX0 539 aaPredicted RBP12.5□□□□□ -0.41
CDV3-209ENST00000515421 POM121Q96HA1 1249 aa12.5□□□□□ -0.41
CDV3-209ENST00000515421 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
CDV3-209ENST00000515421 TOM1O60784 492 aa12.49□□□□□ -0.41
CDV3-209ENST00000515421 SH3D19Q5HYK7 790 aa12.49□□□□□ -0.41
CDV3-209ENST00000515421 LRRC9Q6ZRR7 1453 aa12.49□□□□□ -0.41
CDV3-209ENST00000515421 DNMT1P26358 1616 aaKnown RBP12.48□□□□□ -0.41
CDV3-209ENST00000515421 CPS1P31327 1500 aa12.48□□□□□ -0.41
CDV3-209ENST00000515421 MAP3K1Q13233 1512 aa12.48□□□□□ -0.41
CDV3-209ENST00000515421 DPYSL4O14531 572 aa12.47□□□□□ -0.41
CDV3-209ENST00000515421 PPP1R15AO75807 674 aaPredicted RBP12.47□□□□□ -0.41
CDV3-209ENST00000515421 HSP90B1P14625 803 aaKnown RBP12.46□□□□□ -0.41
CDV3-209ENST00000515421 ILDR2Q71H61 639 aa12.46□□□□□ -0.41
CDV3-209ENST00000515421 SPATA31D1Q6ZQQ2 1576 aa12.46□□□□□ -0.42
CDV3-209ENST00000515421 SHANK2Q9UPX8 1470 aa12.45□□□□□ -0.42
CDV3-209ENST00000515421 PPP1R15BQ5SWA1 713 aa12.45□□□□□ -0.42
CDV3-209ENST00000515421 MYOM3Q5VTT5 1437 aa12.45□□□□□ -0.42
CDV3-209ENST00000515421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.45□□□□□ -0.42
CDV3-209ENST00000515421 GNPATO15228 680 aa12.44□□□□□ -0.42
CDV3-209ENST00000515421 GIGYF2Q6Y7W6 1299 aaKnown RBP12.44□□□□□ -0.42
CDV3-209ENST00000515421 UGGT1Q9NYU2 1555 aa12.44□□□□□ -0.42
CDV3-209ENST00000515421 MED14O60244 1454 aa12.44□□□□□ -0.42
CDV3-209ENST00000515421 NPHP4O75161 1426 aaPredicted RBP12.43□□□□□ -0.42
CDV3-209ENST00000515421 MS4A1P11836 297 aa12.43□□□□□ -0.42
CDV3-209ENST00000515421 MAST1Q9Y2H9 1570 aa12.43□□□□□ -0.42
CDV3-209ENST00000515421 NUTM2FA1L443 756 aa12.42□□□□□ -0.42
CDV3-209ENST00000515421 CDK11BP21127 795 aaKnown RBP12.42□□□□□ -0.42
CDV3-209ENST00000515421 AKT1S1Q96B36 256 aa12.42□□□□□ -0.42
CDV3-209ENST00000515421 MS4A4AQ96JQ5 239 aa12.42□□□□□ -0.42
CDV3-209ENST00000515421 ABCC3O15438 1527 aa12.41□□□□□ -0.42
CDV3-209ENST00000515421 DEPDC5O75140 1603 aa12.4□□□□□ -0.42
CDV3-209ENST00000515421 KANK4Q5T7N3 995 aaPredicted RBP12.4□□□□□ -0.42
CDV3-209ENST00000515421 NEURL4Q96JN8 1562 aa12.4□□□□□ -0.42
CDV3-209ENST00000515421 DUOX2Q9NRD8 1548 aa12.4□□□□□ -0.42
CDV3-209ENST00000515421 RNF17Q9BXT8 1623 aaKnown RBP12.4□□□□□ -0.42
CDV3-209ENST00000515421 EIF2AK4Q9P2K8 1649 aaKnown RBP12.4□□□□□ -0.42
CDV3-209ENST00000515421 PIP4K2BP78356 416 aa12.39□□□□□ -0.43
CDV3-209ENST00000515421 HIC1Q14526 733 aa12.39□□□□□ -0.43
CDV3-209ENST00000515421 ZC3H13Q5T200 1668 aaKnown RBP12.39□□□□□ -0.43
CDV3-209ENST00000515421 ERVK-7P63135 1459 aa12.39□□□□□ -0.43
CDV3-209ENST00000515421 SPDYE5A6NIY4 337 aa12.38□□□□□ -0.43
CDV3-209ENST00000515421 PUS7Q96PZ0 661 aaKnown RBP12.38□□□□□ -0.43
CDV3-209ENST00000515421 AMOTL2Q9Y2J4 779 aa12.38□□□□□ -0.43
CDV3-209ENST00000515421 COG6Q9Y2V7 657 aa12.38□□□□□ -0.43
CDV3-209ENST00000515421 ARHGAP31Q2M1Z3 1444 aa12.38□□□□□ -0.43
CDV3-209ENST00000515421 ERBINQ96RT1 1412 aa12.38□□□□□ -0.43
CDV3-209ENST00000515421 ACIN1Q9UKV3 1341 aaKnown RBP12.38□□□□□ -0.43
CDV3-209ENST00000515421 KANK1Q14678 1352 aa12.38□□□□□ -0.43
CDV3-209ENST00000515421 KIF15Q9NS87 1388 aa12.38□□□□□ -0.43
CDV3-209ENST00000515421 POLR1AO95602 1720 aaPredicted RBP12.38□□□□□ -0.43
CDV3-209ENST00000515421 HSPA1LP34931 641 aa12.37□□□□□ -0.43
CDV3-209ENST00000515421 KCNA1Q09470 495 aa12.37□□□□□ -0.43
CDV3-209ENST00000515421 EMILIN3Q9NT22 766 aa12.37□□□□□ -0.43
CDV3-209ENST00000515421 ZNF330Q9Y3S2 320 aaPredicted RBP12.37□□□□□ -0.43
CDV3-209ENST00000515421 EID1Q9Y6B2 187 aa12.37□□□□□ -0.43
CDV3-209ENST00000515421 SKIV2LQ15477 1246 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms