RNA–Protein interactions for RNA: ENST00000515215.6

SNCAIP-221, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,708 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-221ENST00000515215 WAPLQ7Z5K2 1190 aa17.37■□□□□ 0.37
SNCAIP-221ENST00000515215 AMOTL2Q9Y2J4 779 aa17.36■□□□□ 0.37
SNCAIP-221ENST00000515215 HSPA2P54652 639 aa17.35■□□□□ 0.37
SNCAIP-221ENST00000515215 STRCQ7RTU9 1775 aa17.35■□□□□ 0.37
SNCAIP-221ENST00000515215 PUS7Q96PZ0 661 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-221ENST00000515215 EVC2Q86UK5 1308 aa17.35■□□□□ 0.37
SNCAIP-221ENST00000515215 MIER1Q8N108 512 aa17.34■□□□□ 0.37
SNCAIP-221ENST00000515215 MINK1Q8N4C8 1332 aaPredicted RBP17.34■□□□□ 0.37
SNCAIP-221ENST00000515215 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.34■□□□□ 0.37
SNCAIP-221ENST00000515215 ADGRB2O60241 1585 aa17.33■□□□□ 0.36
SNCAIP-221ENST00000515215 NWD1Q149M9 1564 aa17.32■□□□□ 0.36
SNCAIP-221ENST00000515215 KCNA6P17658 529 aa17.31■□□□□ 0.36
SNCAIP-221ENST00000515215 CABP2Q9NPB3 220 aa17.28■□□□□ 0.36
SNCAIP-221ENST00000515215 PER1O15534 1290 aaPredicted RBP17.27■□□□□ 0.36
SNCAIP-221ENST00000515215 CDK19Q9BWU1 502 aa17.27■□□□□ 0.36
SNCAIP-221ENST00000515215 PANK3Q9H999 370 aa17.27■□□□□ 0.36
SNCAIP-221ENST00000515215 WASLO00401 505 aaPredicted RBP17.27■□□□□ 0.35
SNCAIP-221ENST00000515215 ATAD2Q6PL18 1390 aa17.26■□□□□ 0.35
SNCAIP-221ENST00000515215 ANP32CO43423 234 aa17.26■□□□□ 0.35
SNCAIP-221ENST00000515215 SRPK2P78362 688 aaKnown RBP17.25■□□□□ 0.35
SNCAIP-221ENST00000515215 STRCP1A6NGW2 1772 aa17.25■□□□□ 0.35
SNCAIP-221ENST00000515215 NINLQ9Y2I6 1382 aa17.24■□□□□ 0.35
SNCAIP-221ENST00000515215 NKTRP30414 1462 aaKnown RBP17.24■□□□□ 0.35
SNCAIP-221ENST00000515215 NALCNQ8IZF0 1738 aa17.24■□□□□ 0.35
SNCAIP-221ENST00000515215 SLC12A5Q9H2X9 1139 aa17.23■□□□□ 0.35
SNCAIP-221ENST00000515215 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
SNCAIP-221ENST00000515215 ATP7BP35670 1465 aa17.22■□□□□ 0.35
SNCAIP-221ENST00000515215 TOPAZ1Q8N9V7 1692 aa17.21■□□□□ 0.35
SNCAIP-221ENST00000515215 TMC1Q8TDI8 760 aa17.21■□□□□ 0.35
SNCAIP-221ENST00000515215 ANKRD36BQ8N2N9 1353 aa17.2■□□□□ 0.34
SNCAIP-221ENST00000515215 USP32Q8NFA0 1604 aa17.2■□□□□ 0.34
SNCAIP-221ENST00000515215 CD163L1Q9NR16 1453 aa17.2■□□□□ 0.34
SNCAIP-221ENST00000515215 CDC42BPGQ6DT37 1551 aa17.2■□□□□ 0.34
SNCAIP-221ENST00000515215 FMN2Q9NZ56 1722 aa17.19■□□□□ 0.34
SNCAIP-221ENST00000515215 CARD14Q9BXL6 1004 aa17.19■□□□□ 0.34
SNCAIP-221ENST00000515215 ADGRL3Q9HAR2 1447 aa17.19■□□□□ 0.34
SNCAIP-221ENST00000515215 PRR36Q9H6K5 1346 aa17.18■□□□□ 0.34
SNCAIP-221ENST00000515215 NUDT16Q96DE0 195 aaKnown RBP17.18■□□□□ 0.34
SNCAIP-221ENST00000515215 AMER1Q5JTC6 1135 aaPredicted RBP17.17■□□□□ 0.34
SNCAIP-221ENST00000515215 A0A1W2PP64 1363 aa17.17■□□□□ 0.34
SNCAIP-221ENST00000515215 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
SNCAIP-221ENST00000515215 KNSTRNQ9Y448 316 aa17.16■□□□□ 0.34
SNCAIP-221ENST00000515215 PPIP5K1Q6PFW1 1433 aa17.16■□□□□ 0.34
SNCAIP-221ENST00000515215 ITSN1Q15811 1721 aa17.16■□□□□ 0.34
SNCAIP-221ENST00000515215 RGPD8O14715 1765 aaPredicted RBP17.16■□□□□ 0.34
SNCAIP-221ENST00000515215 CCER2I3L3R5 266 aa17.16■□□□□ 0.34
SNCAIP-221ENST00000515215 CABP1Q9NZU7 370 aa17.16■□□□□ 0.34
SNCAIP-221ENST00000515215 CCDC61Q9Y6R9 512 aa17.16■□□□□ 0.34
SNCAIP-221ENST00000515215 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
SNCAIP-221ENST00000515215 NSD3Q9BZ95 1437 aa17.15■□□□□ 0.34
SNCAIP-221ENST00000515215 PARD3Q8TEW0 1356 aa17.15■□□□□ 0.34
SNCAIP-221ENST00000515215 RBM33Q96EV2 1170 aaKnown RBP17.15■□□□□ 0.34
SNCAIP-221ENST00000515215 AKAP12Q02952 1782 aa17.14■□□□□ 0.33
SNCAIP-221ENST00000515215 ANKARQ7Z5J8 1434 aa17.14■□□□□ 0.33
SNCAIP-221ENST00000515215 CPSF1Q10570 1443 aaKnown RBP17.14■□□□□ 0.33
SNCAIP-221ENST00000515215 NCOA3Q9Y6Q9 1424 aa17.14■□□□□ 0.33
SNCAIP-221ENST00000515215 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-221ENST00000515215 MON2Q7Z3U7 1717 aa17.13■□□□□ 0.33
SNCAIP-221ENST00000515215 TERF2IPQ9NYB0 399 aa17.13■□□□□ 0.33
SNCAIP-221ENST00000515215 XIRP1Q702N8 1843 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-221ENST00000515215 RALBP1Q15311 655 aa17.12■□□□□ 0.33
SNCAIP-221ENST00000515215 CC2D1BQ5T0F9 858 aaKnown RBP17.11■□□□□ 0.33
SNCAIP-221ENST00000515215 DMRT2Q9Y5R5 561 aa17.11■□□□□ 0.33
SNCAIP-221ENST00000515215 TMEM94Q12767 1356 aa17.11■□□□□ 0.33
SNCAIP-221ENST00000515215 PLEKHG3A1L390 1219 aa17.1■□□□□ 0.33
SNCAIP-221ENST00000515215 CNGB1Q14028 1251 aaPredicted RBP17.1■□□□□ 0.33
SNCAIP-221ENST00000515215 HDGFL2Q7Z4V5 671 aaPredicted RBP17.1■□□□□ 0.33
SNCAIP-221ENST00000515215 NUTM2FA1L443 756 aa17.1■□□□□ 0.33
SNCAIP-221ENST00000515215 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
SNCAIP-221ENST00000515215 LRRC7Q96NW7 1537 aa17.08■□□□□ 0.32
SNCAIP-221ENST00000515215 NRKQ7Z2Y5 1582 aa17.07■□□□□ 0.32
SNCAIP-221ENST00000515215 CGNL1Q0VF96 1302 aa17.07■□□□□ 0.32
SNCAIP-221ENST00000515215 MYBBP1AQ9BQG0 1328 aaKnown RBP17.07■□□□□ 0.32
SNCAIP-221ENST00000515215 DCCP43146 1447 aa17.07■□□□□ 0.32
SNCAIP-221ENST00000515215 ANKRD26Q9UPS8 1709 aa17.07■□□□□ 0.32
SNCAIP-221ENST00000515215 C19orf44Q9H6X5 657 aa17.07■□□□□ 0.32
SNCAIP-221ENST00000515215 KIF20BQ96Q89 1820 aa17.07■□□□□ 0.32
SNCAIP-221ENST00000515215 NSD2O96028 1365 aa17.07■□□□□ 0.32
SNCAIP-221ENST00000515215 EDC4Q6P2E9 1401 aaKnown RBP17.06■□□□□ 0.32
SNCAIP-221ENST00000515215 CCDC184Q52MB2 194 aa17.06■□□□□ 0.32
SNCAIP-221ENST00000515215 C14orf37Q86TY3 774 aa17.06■□□□□ 0.32
SNCAIP-221ENST00000515215 POLR3AO14802 1390 aaPredicted RBP17.06■□□□□ 0.32
SNCAIP-221ENST00000515215 ACEP12821 1306 aa17.06■□□□□ 0.32
SNCAIP-221ENST00000515215 ZNF692Q9BU19 519 aaPredicted RBP17.05■□□□□ 0.32
SNCAIP-221ENST00000515215 USP6P35125 1406 aa17.03■□□□□ 0.32
SNCAIP-221ENST00000515215 SSH2Q76I76 1423 aa17.03■□□□□ 0.32
SNCAIP-221ENST00000515215 FYB1O15117 783 aa17.02■□□□□ 0.32
SNCAIP-221ENST00000515215 BRD4O60885 1362 aaPredicted RBP17.02■□□□□ 0.31
SNCAIP-221ENST00000515215 MST1RQ04912 1400 aa17.02■□□□□ 0.31
SNCAIP-221ENST00000515215 NLRP13Q86W25 1043 aa17.01■□□□□ 0.31
SNCAIP-221ENST00000515215 PMFBP1Q8TBY8 1022 aa17.01■□□□□ 0.31
SNCAIP-221ENST00000515215 C1orf167Q5SNV9 1468 aa17.01■□□□□ 0.31
SNCAIP-221ENST00000515215 MSH6P52701 1360 aa17■□□□□ 0.31
SNCAIP-221ENST00000515215 PPP2R1AP30153 589 aa17■□□□□ 0.31
SNCAIP-221ENST00000515215 MRS2Q9HD23 443 aa17■□□□□ 0.31
SNCAIP-221ENST00000515215 PHF8Q9UPP1 1060 aa16.99■□□□□ 0.31
SNCAIP-221ENST00000515215 LTBP4Q8N2S1 1624 aa16.99■□□□□ 0.31
SNCAIP-221ENST00000515215 KIF1AQ12756 1690 aa16.99■□□□□ 0.31
SNCAIP-221ENST00000515215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.99■□□□□ 0.31
SNCAIP-221ENST00000515215 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms