RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 PLEKHH1Q9ULM0 1364 aa35.74■■■■□ 3.31
SNF8-213ENST00000514929 SPATA31A6Q5VVP1 1343 aa35.73■■■■□ 3.31
SNF8-213ENST00000514929 SHPRHQ149N8 1683 aa35.72■■■■□ 3.31
SNF8-213ENST00000514929 DDX17Q92841 729 aaKnown RBP35.72■■■■□ 3.31
SNF8-213ENST00000514929 STAC3Q96MF2 364 aa35.72■■■■□ 3.31
SNF8-213ENST00000514929 ORAI2Q96SN7 254 aa35.72■■■■□ 3.31
SNF8-213ENST00000514929 SIRT1Q96EB6 747 aa35.7■■■■□ 3.31
SNF8-213ENST00000514929 RGS17Q9UGC6 210 aaPredicted RBP35.7■■■■□ 3.31
SNF8-213ENST00000514929 LRRC59Q96AG4 307 aaKnown RBP35.68■■■■□ 3.3
SNF8-213ENST00000514929 ESCO1Q5FWF5 840 aa35.63■■■■□ 3.29
SNF8-213ENST00000514929 MEX3CQ5U5Q3 659 aaKnown RBP35.63■■■■□ 3.29
SNF8-213ENST00000514929 LRP6O75581 1613 aa35.63■■■■□ 3.29
SNF8-213ENST00000514929 NUTM2FA1L443 756 aa35.62■■■■□ 3.29
SNF8-213ENST00000514929 ADGRB1O14514 1584 aa35.62■■■■□ 3.29
SNF8-213ENST00000514929 PRAM1Q96QH2 718 aa35.61■■■■□ 3.29
SNF8-213ENST00000514929 DLC1Q96QB1 1528 aa35.59■■■■□ 3.29
SNF8-213ENST00000514929 NUTM2BA6NNL0 878 aaPredicted RBP35.59■■■■□ 3.29
SNF8-213ENST00000514929 NUTM2EB1AL46 878 aaPredicted RBP35.59■■■■□ 3.29
SNF8-213ENST00000514929 SAFB2Q14151 953 aaKnown RBP eCLIP35.59■■■■□ 3.29
SNF8-213ENST00000514929 NUTM2AQ8IVF1 878 aaPredicted RBP35.59■■■■□ 3.29
SNF8-213ENST00000514929 POGKQ9P215 609 aa35.59■■■■□ 3.29
SNF8-213ENST00000514929 FMN2Q9NZ56 1722 aa35.57■■■■□ 3.29
SNF8-213ENST00000514929 TRAK1Q9UPV9 953 aa35.57■■■■□ 3.28
SNF8-213ENST00000514929 SOS2Q07890 1332 aaPredicted RBP35.57■■■■□ 3.28
SNF8-213ENST00000514929 PNPLA6Q8IY17 1366 aa35.55■■■■□ 3.28
SNF8-213ENST00000514929 NPHP3Q7Z494 1330 aa35.54■■■■□ 3.28
SNF8-213ENST00000514929 POTEAQ6S8J7 498 aa35.53■■■■□ 3.28
SNF8-213ENST00000514929 FOXO3O43524 673 aa35.49■■■■□ 3.27
SNF8-213ENST00000514929 KIF1AQ12756 1690 aa35.44■■■■□ 3.26
SNF8-213ENST00000514929 PXDNQ92626 1479 aa35.44■■■■□ 3.26
SNF8-213ENST00000514929 XPCQ01831 940 aaPredicted RBP35.44■■■■□ 3.26
SNF8-213ENST00000514929 ZNF772Q68DY9 489 aaPredicted RBP35.43■■■■□ 3.26
SNF8-213ENST00000514929 ADGRB2O60241 1585 aa35.42■■■■□ 3.26
SNF8-213ENST00000514929 MINK1Q8N4C8 1332 aaPredicted RBP35.41■■■■□ 3.26
SNF8-213ENST00000514929 HIRIP3Q9BW71 556 aaPredicted RBP35.41■■■■□ 3.26
SNF8-213ENST00000514929 RGPD8O14715 1765 aaPredicted RBP35.41■■■■□ 3.26
SNF8-213ENST00000514929 KIAA1210Q9ULL0 1709 aa35.4■■■■□ 3.26
SNF8-213ENST00000514929 SIN3AQ96ST3 1273 aa35.4■■■■□ 3.26
SNF8-213ENST00000514929 PHF8Q9UPP1 1060 aa35.39■■■■□ 3.26
SNF8-213ENST00000514929 TRIM26Q12899 539 aaPredicted RBP35.38■■■■□ 3.25
SNF8-213ENST00000514929 ARHGEF28Q8N1W1 1705 aaKnown RBP35.37■■■■□ 3.25
SNF8-213ENST00000514929 ADAMTS2O95450 1211 aa35.36■■■■□ 3.25
SNF8-213ENST00000514929 NEUROD1Q13562 356 aa35.36■■■■□ 3.25
SNF8-213ENST00000514929 ANKARQ7Z5J8 1434 aa35.36■■■■□ 3.25
SNF8-213ENST00000514929 C8orf37Q96NL8 207 aa35.36■■■■□ 3.25
SNF8-213ENST00000514929 AFF2P51816 1311 aa35.35■■■■□ 3.25
SNF8-213ENST00000514929 L3MBTL2Q969R5 705 aa35.35■■■■□ 3.25
SNF8-213ENST00000514929 COL22A1Q8NFW1 1626 aaPredicted RBP35.35■■■■□ 3.25
SNF8-213ENST00000514929 KRT28Q7Z3Y7 464 aa35.33■■■■□ 3.25
SNF8-213ENST00000514929 EIF3AQ14152 1382 aaKnown RBP35.33■■■■□ 3.25
SNF8-213ENST00000514929 NBPF1Q3BBV0 1214 aa35.32■■■■□ 3.24
SNF8-213ENST00000514929 USP32Q8NFA0 1604 aa35.32■■■■□ 3.24
SNF8-213ENST00000514929 WASLO00401 505 aaPredicted RBP35.31■■■■□ 3.24
SNF8-213ENST00000514929 PSME1Q06323 249 aa35.28■■■■□ 3.24
SNF8-213ENST00000514929 NGLY1Q96IV0 654 aa35.28■■■■□ 3.24
SNF8-213ENST00000514929 SPATA31A3Q5VYP0 1347 aa35.28■■■■□ 3.24
SNF8-213ENST00000514929 TULP4Q9NRJ4 1543 aa35.27■■■■□ 3.24
SNF8-213ENST00000514929 PMFBP1Q8TBY8 1022 aa35.27■■■■□ 3.24
SNF8-213ENST00000514929 PRR36Q9H6K5 1346 aa35.24■■■■□ 3.23
SNF8-213ENST00000514929 RXRBP28702 533 aa35.21■■■■□ 3.23
SNF8-213ENST00000514929 TNS3Q68CZ2 1445 aa35.21■■■■□ 3.23
SNF8-213ENST00000514929 SBNO1A3KN83 1393 aa35.18■■■■□ 3.22
SNF8-213ENST00000514929 LMOD2Q6P5Q4 547 aa35.17■■■■□ 3.22
SNF8-213ENST00000514929 QTRT2Q9H974 415 aaKnown RBP35.17■■■■□ 3.22
SNF8-213ENST00000514929 CDK19Q9BWU1 502 aa35.16■■■■□ 3.22
SNF8-213ENST00000514929 GPRASP1Q5JY77 1395 aa35.15■■■■□ 3.22
SNF8-213ENST00000514929 USP21Q9UK80 565 aa35.15■■■■□ 3.22
SNF8-213ENST00000514929 TRPM1Q7Z4N2 1603 aa35.14■■■■□ 3.22
SNF8-213ENST00000514929 NGDNQ8NEJ9 315 aaKnown RBP35.14■■■■□ 3.22
SNF8-213ENST00000514929 NUDT16Q96DE0 195 aaKnown RBP35.14■■■■□ 3.22
SNF8-213ENST00000514929 CENPJQ9HC77 1338 aaPredicted RBP35.13■■■■□ 3.21
SNF8-213ENST00000514929 ITSN1Q15811 1721 aa35.13■■■■□ 3.21
SNF8-213ENST00000514929 MARF1Q9Y4F3 1742 aaKnown RBP35.13■■■■□ 3.21
SNF8-213ENST00000514929 ATP7BP35670 1465 aa35.13■■■■□ 3.21
SNF8-213ENST00000514929 ARHGEF10O15013 1369 aa35.13■■■■□ 3.21
SNF8-213ENST00000514929 HAP1P54257 671 aaPredicted RBP35.12■■■■□ 3.21
SNF8-213ENST00000514929 FNBP4Q8N3X1 1017 aaPredicted RBP35.12■■■■□ 3.21
SNF8-213ENST00000514929 PLEKHG5O94827 1062 aa35.1■■■■□ 3.21
SNF8-213ENST00000514929 RBM6P78332 1123 aaKnown RBP35.09■■■■□ 3.21
SNF8-213ENST00000514929 ROCK2O75116 1388 aaKnown RBP35.08■■■■□ 3.21
SNF8-213ENST00000514929 CDK12Q9NYV4 1490 aaPredicted RBP35.08■■■■□ 3.21
SNF8-213ENST00000514929 CABLES1Q8TDN4 633 aa35.07■■■■□ 3.2
SNF8-213ENST00000514929 TRPM3Q9HCF6 1732 aaPredicted RBP35.06■■■■□ 3.2
SNF8-213ENST00000514929 TRPC5Q9UL62 973 aaPredicted RBP35.06■■■■□ 3.2
SNF8-213ENST00000514929 QRICH2Q9H0J4 1663 aa35.05■■■■□ 3.2
SNF8-213ENST00000514929 TONSLQ96HA7 1378 aa35.05■■■■□ 3.2
SNF8-213ENST00000514929 SRPK2P78362 688 aaKnown RBP35.03■■■■□ 3.2
SNF8-213ENST00000514929 CCDC61Q9Y6R9 512 aa35.03■■■■□ 3.2
SNF8-213ENST00000514929 NBPF8Q3BBV2 869 aa35.02■■■■□ 3.2
SNF8-213ENST00000514929 PAK3O75914 559 aaPredicted RBP35.01■■■■□ 3.2
SNF8-213ENST00000514929 TOPAZ1Q8N9V7 1692 aa35.01■■■■□ 3.19
SNF8-213ENST00000514929 BCL9LQ86UU0 1499 aa35■■■■□ 3.19
SNF8-213ENST00000514929 ALS2Q96Q42 1657 aa35■■■■□ 3.19
SNF8-213ENST00000514929 ABCA3Q99758 1704 aa34.99■■■■□ 3.19
SNF8-213ENST00000514929 ATRNO75882 1429 aa34.98■■■■□ 3.19
SNF8-213ENST00000514929 RGS12O14924 1447 aa34.98■■■■□ 3.19
SNF8-213ENST00000514929 CABP2Q9NPB3 220 aa34.96■■■■□ 3.19
SNF8-213ENST00000514929 ACEP12821 1306 aa34.96■■■■□ 3.19
SNF8-213ENST00000514929 PLEKHG3A1L390 1219 aa34.95■■■■□ 3.19
SNF8-213ENST00000514929 POLR3AO14802 1390 aaPredicted RBP34.95■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms