RNA–Protein interactions for RNA: ENST00000514693.5

PROM1-217, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-217ENST00000514693 PDIA4P13667 645 aaKnown RBP8.63□□□□□ -1.03
PROM1-217ENST00000514693 GRIPAP1Q4V328 841 aa8.63□□□□□ -1.03
PROM1-217ENST00000514693 IRF6O14896 467 aa8.62□□□□□ -1.03
PROM1-217ENST00000514693 FMNL1O95466 1100 aaPredicted RBP8.62□□□□□ -1.03
PROM1-217ENST00000514693 AMHR2Q16671 573 aa8.62□□□□□ -1.03
PROM1-217ENST00000514693 SPRYD7Q5W111 196 aa8.62□□□□□ -1.03
PROM1-217ENST00000514693 PARP9Q8IXQ6 854 aa8.62□□□□□ -1.03
PROM1-217ENST00000514693 ZNF598Q86UK7 904 aaKnown RBP8.61□□□□□ -1.03
PROM1-217ENST00000514693 SLC27A5Q9Y2P5 690 aa8.61□□□□□ -1.03
PROM1-217ENST00000514693 ZBTB7CA1YPR0 619 aa8.6□□□□□ -1.03
PROM1-217ENST00000514693 ZNF697Q5TEC3 545 aa8.6□□□□□ -1.03
PROM1-217ENST00000514693 LIAT1Q6ZQX7 453 aa8.6□□□□□ -1.03
PROM1-217ENST00000514693 MDM2Q00987 491 aaPredicted RBP8.59□□□□□ -1.03
PROM1-217ENST00000514693 EMID1Q96A84 441 aaPredicted RBP8.59□□□□□ -1.03
PROM1-217ENST00000514693 GOPCQ9HD26 462 aa8.59□□□□□ -1.03
PROM1-217ENST00000514693 A6NJR5 290 aa8.58□□□□□ -1.04
PROM1-217ENST00000514693 TRAK2O60296 914 aa8.58□□□□□ -1.04
PROM1-217ENST00000514693 CCDC82Q8N4S0 544 aa8.58□□□□□ -1.04
PROM1-217ENST00000514693 CLUAP1Q96AJ1 413 aa8.58□□□□□ -1.04
PROM1-217ENST00000514693 THAP11Q96EK4 314 aa8.57□□□□□ -1.04
PROM1-217ENST00000514693 SALL2Q9Y467 1007 aaPredicted RBP8.57□□□□□ -1.04
PROM1-217ENST00000514693 CD46P15529 392 aa8.56□□□□□ -1.04
PROM1-217ENST00000514693 Q3C1V9 767 aa8.56□□□□□ -1.04
PROM1-217ENST00000514693 PKDCCQ504Y2 493 aa8.56□□□□□ -1.04
PROM1-217ENST00000514693 PLA2G2CQ5R387 149 aa8.56□□□□□ -1.04
PROM1-217ENST00000514693 TRIM67Q6ZTA4 783 aa8.56□□□□□ -1.04
PROM1-217ENST00000514693 FCF1Q9Y324 198 aaKnown RBP8.56□□□□□ -1.04
PROM1-217ENST00000514693 LCE2BO14633 110 aa8.55□□□□□ -1.04
PROM1-217ENST00000514693 KDM4AO75164 1064 aa8.55□□□□□ -1.04
PROM1-217ENST00000514693 CLCN1P35523 988 aa8.55□□□□□ -1.04
PROM1-217ENST00000514693 PRR20EP86478 221 aa8.55□□□□□ -1.04
PROM1-217ENST00000514693 PRR20CP86479 221 aa8.55□□□□□ -1.04
PROM1-217ENST00000514693 PRR20DP86480 221 aa8.55□□□□□ -1.04
PROM1-217ENST00000514693 PRR20BP86481 221 aa8.55□□□□□ -1.04
PROM1-217ENST00000514693 PRR20AP86496 221 aa8.55□□□□□ -1.04
PROM1-217ENST00000514693 TTLL12Q14166 644 aaPredicted RBP8.55□□□□□ -1.04
PROM1-217ENST00000514693 BRICD5Q6PL45 260 aa8.55□□□□□ -1.04
PROM1-217ENST00000514693 CCDC9Q9Y3X0 531 aaKnown RBP8.55□□□□□ -1.04
PROM1-217ENST00000514693 TNFRSF10AO00220 468 aa8.54□□□□□ -1.04
PROM1-217ENST00000514693 RNF19BQ6ZMZ0 732 aa8.54□□□□□ -1.04
PROM1-217ENST00000514693 FAM160A2Q8N612 972 aaPredicted RBP8.54□□□□□ -1.04
PROM1-217ENST00000514693 GPCPD1Q9NPB8 672 aa8.54□□□□□ -1.04
PROM1-217ENST00000514693 CD2BP2O95400 341 aaKnown RBP8.53□□□□□ -1.04
PROM1-217ENST00000514693 USP46P62068 366 aa8.53□□□□□ -1.04
PROM1-217ENST00000514693 FOXC1Q12948 553 aa8.53□□□□□ -1.04
PROM1-217ENST00000514693 PCMTD1Q96MG8 357 aaPredicted RBP8.53□□□□□ -1.04
PROM1-217ENST00000514693 ZBTB24O43167 697 aaPredicted RBP8.52□□□□□ -1.05
PROM1-217ENST00000514693 RPIAP49247 311 aa8.52□□□□□ -1.05
PROM1-217ENST00000514693 MSS51Q4VC12 460 aa8.52□□□□□ -1.05
PROM1-217ENST00000514693 PRDM9Q9NQV7 894 aa8.52□□□□□ -1.05
PROM1-217ENST00000514693 FAM187AA6NFU0 413 aa8.51□□□□□ -1.05
PROM1-217ENST00000514693 GDF9O60383 454 aa8.51□□□□□ -1.05
PROM1-217ENST00000514693 DGAT1O75907 488 aa8.51□□□□□ -1.05
PROM1-217ENST00000514693 MS4A1P11836 297 aa8.5□□□□□ -1.05
PROM1-217ENST00000514693 MCM6Q14566 821 aa8.49□□□□□ -1.05
PROM1-217ENST00000514693 GIGYF2Q6Y7W6 1299 aaKnown RBP8.49□□□□□ -1.05
PROM1-217ENST00000514693 NUTM1Q86Y26 1132 aa8.49□□□□□ -1.05
PROM1-217ENST00000514693 USB1Q9BQ65 265 aaKnown RBP8.49□□□□□ -1.05
PROM1-217ENST00000514693 ZNF787Q6DD87 383 aa8.48□□□□□ -1.05
PROM1-217ENST00000514693 FAM217BQ9NTX9 383 aaPredicted RBP8.48□□□□□ -1.05
PROM1-217ENST00000514693 HOXA2O43364 376 aa8.47□□□□□ -1.05
PROM1-217ENST00000514693 ZNF777Q9ULD5 760 aaPredicted RBP8.47□□□□□ -1.05
PROM1-217ENST00000514693 MYT1Q01538 1121 aa8.46□□□□□ -1.06
PROM1-217ENST00000514693 HLA-CQ95604 372 aa8.46□□□□□ -1.06
PROM1-217ENST00000514693 REPIN1Q9BWE0 567 aaKnown RBP8.46□□□□□ -1.06
PROM1-217ENST00000514693 PKD2L1Q9P0L9 805 aa8.46□□□□□ -1.06
PROM1-217ENST00000514693 MMP16P51512 607 aa8.45□□□□□ -1.06
PROM1-217ENST00000514693 SH3D19Q5HYK7 790 aa8.45□□□□□ -1.06
PROM1-217ENST00000514693 PROSER2Q86WR7 435 aaPredicted RBP8.45□□□□□ -1.06
PROM1-217ENST00000514693 CYP4X1Q8N118 509 aa8.45□□□□□ -1.06
PROM1-217ENST00000514693 CCDC24Q8N4L8 307 aa8.44□□□□□ -1.06
PROM1-217ENST00000514693 DXOO77932 396 aaKnown RBP8.43□□□□□ -1.06
PROM1-217ENST00000514693 GUCA2AQ02747 115 aa8.43□□□□□ -1.06
PROM1-217ENST00000514693 TTC24A2A3L6 582 aaPredicted RBP8.42□□□□□ -1.06
PROM1-217ENST00000514693 SSTR3P32745 418 aaPredicted RBP8.42□□□□□ -1.06
PROM1-217ENST00000514693 TRIM32Q13049 653 aa8.42□□□□□ -1.06
PROM1-217ENST00000514693 CCDC97Q96F63 343 aaPredicted RBP8.42□□□□□ -1.06
PROM1-217ENST00000514693 TRAIPQ9BWF2 469 aa8.42□□□□□ -1.06
PROM1-217ENST00000514693 SERPINA10Q9UK55 444 aa8.42□□□□□ -1.06
PROM1-217ENST00000514693 FNBP4Q8N3X1 1017 aaPredicted RBP8.41□□□□□ -1.06
PROM1-217ENST00000514693 POM121Q96HA1 1249 aa8.41□□□□□ -1.06
PROM1-217ENST00000514693 C6orf229H3BNL8 230 aa8.4□□□□□ -1.06
PROM1-217ENST00000514693 RAD21O60216 631 aa8.4□□□□□ -1.06
PROM1-217ENST00000514693 FDX1P10109 184 aa8.4□□□□□ -1.06
PROM1-217ENST00000514693 SKIV2LQ15477 1246 aaKnown RBP8.4□□□□□ -1.06
PROM1-217ENST00000514693 KCTD17Q8N5Z5 321 aa8.4□□□□□ -1.06
PROM1-217ENST00000514693 SYMPKQ92797 1274 aaKnown RBP8.4□□□□□ -1.06
PROM1-217ENST00000514693 TOR4AQ9NXH8 423 aa8.4□□□□□ -1.06
PROM1-217ENST00000514693 RETREG3Q86VR2 466 aa8.39□□□□□ -1.07
PROM1-217ENST00000514693 WNT7AO00755 349 aa8.38□□□□□ -1.07
PROM1-217ENST00000514693 ST8SIA5O15466 376 aa8.38□□□□□ -1.07
PROM1-217ENST00000514693 JUNDP17535 347 aa8.38□□□□□ -1.07
PROM1-217ENST00000514693 ATP1B4Q9UN42 357 aaPredicted RBP8.38□□□□□ -1.07
PROM1-217ENST00000514693 PROCA1Q8NCQ7 364 aaPredicted RBP8.37□□□□□ -1.07
PROM1-217ENST00000514693 SPIRE2Q8WWL2 714 aa8.37□□□□□ -1.07
PROM1-217ENST00000514693 AAASQ9NRG9 546 aa8.37□□□□□ -1.07
PROM1-217ENST00000514693 AEBP1Q8IUX7 1158 aa8.36□□□□□ -1.07
PROM1-217ENST00000514693 SNIP1Q8TAD8 396 aaKnown RBP8.36□□□□□ -1.07
PROM1-217ENST00000514693 NUDT12Q9BQG2 462 aa8.36□□□□□ -1.07
PROM1-217ENST00000514693 AXIN1O15169 862 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms