RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 POGKQ9P215 609 aa27.28■■□□□ 1.96
SSBP2-218ENST00000514493 PLEKHH1Q9ULM0 1364 aa27.27■■□□□ 1.96
SSBP2-218ENST00000514493 ROBO2Q9HCK4 1378 aa27.25■■□□□ 1.95
SSBP2-218ENST00000514493 SAFB2Q14151 953 aaKnown RBP eCLIP27.25■■□□□ 1.95
SSBP2-218ENST00000514493 ADGRB2O60241 1585 aa27.24■■□□□ 1.95
SSBP2-218ENST00000514493 EVC2Q86UK5 1308 aa27.23■■□□□ 1.95
SSBP2-218ENST00000514493 NWD1Q149M9 1564 aa27.22■■□□□ 1.95
SSBP2-218ENST00000514493 WAPLQ7Z5K2 1190 aa27.22■■□□□ 1.95
SSBP2-218ENST00000514493 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.21■■□□□ 1.95
SSBP2-218ENST00000514493 MINK1Q8N4C8 1332 aaPredicted RBP27.21■■□□□ 1.95
SSBP2-218ENST00000514493 AMOTL2Q9Y2J4 779 aa27.2■■□□□ 1.95
SSBP2-218ENST00000514493 PUS7Q96PZ0 661 aaKnown RBP27.19■■□□□ 1.94
SSBP2-218ENST00000514493 DMRT2Q9Y5R5 561 aa27.18■■□□□ 1.94
SSBP2-218ENST00000514493 ANP32CO43423 234 aa27.17■■□□□ 1.94
SSBP2-218ENST00000514493 KCNA6P17658 529 aa27.12■■□□□ 1.93
SSBP2-218ENST00000514493 ATAD2Q6PL18 1390 aa27.12■■□□□ 1.93
SSBP2-218ENST00000514493 NINLQ9Y2I6 1382 aa27.1■■□□□ 1.93
SSBP2-218ENST00000514493 NALCNQ8IZF0 1738 aa27.09■■□□□ 1.93
SSBP2-218ENST00000514493 ZNF335Q9H4Z2 1342 aaPredicted RBP27.09■■□□□ 1.93
SSBP2-218ENST00000514493 CABP2Q9NPB3 220 aa27.09■■□□□ 1.93
SSBP2-218ENST00000514493 SRPK2P78362 688 aaKnown RBP27.08■■□□□ 1.93
SSBP2-218ENST00000514493 PANK3Q9H999 370 aa27.08■■□□□ 1.93
SSBP2-218ENST00000514493 NKTRP30414 1462 aaKnown RBP27.08■■□□□ 1.93
SSBP2-218ENST00000514493 CDK19Q9BWU1 502 aa27.07■■□□□ 1.92
SSBP2-218ENST00000514493 STRCP1A6NGW2 1772 aa27.07■■□□□ 1.92
SSBP2-218ENST00000514493 TOPAZ1Q8N9V7 1692 aa27.06■■□□□ 1.92
SSBP2-218ENST00000514493 WASLO00401 505 aaPredicted RBP27.06■■□□□ 1.92
SSBP2-218ENST00000514493 PER1O15534 1290 aaPredicted RBP27.04■■□□□ 1.92
SSBP2-218ENST00000514493 CDC42BPGQ6DT37 1551 aa27.03■■□□□ 1.92
SSBP2-218ENST00000514493 ATP7BP35670 1465 aa27.03■■□□□ 1.92
SSBP2-218ENST00000514493 USP32Q8NFA0 1604 aa27.02■■□□□ 1.92
SSBP2-218ENST00000514493 ITSN1Q15811 1721 aa27.02■■□□□ 1.92
SSBP2-218ENST00000514493 FMN2Q9NZ56 1722 aa27.02■■□□□ 1.92
SSBP2-218ENST00000514493 CCER2I3L3R5 266 aa27.01■■□□□ 1.91
SSBP2-218ENST00000514493 TMC1Q8TDI8 760 aa27.01■■□□□ 1.91
SSBP2-218ENST00000514493 ANKRD36BQ8N2N9 1353 aa27■■□□□ 1.91
SSBP2-218ENST00000514493 SLC12A5Q9H2X9 1139 aa26.99■■□□□ 1.91
SSBP2-218ENST00000514493 PRKRIP1Q9H875 184 aaPredicted RBP26.99■■□□□ 1.91
SSBP2-218ENST00000514493 ADGRL3Q9HAR2 1447 aa26.98■■□□□ 1.91
SSBP2-218ENST00000514493 CD163L1Q9NR16 1453 aa26.97■■□□□ 1.91
SSBP2-218ENST00000514493 RGPD8O14715 1765 aaPredicted RBP26.96■■□□□ 1.91
SSBP2-218ENST00000514493 AKAP12Q02952 1782 aa26.96■■□□□ 1.91
SSBP2-218ENST00000514493 KTN1Q86UP2 1357 aaKnown RBP26.96■■□□□ 1.91
SSBP2-218ENST00000514493 KNSTRNQ9Y448 316 aa26.95■■□□□ 1.9
SSBP2-218ENST00000514493 PPIP5K1Q6PFW1 1433 aa26.94■■□□□ 1.9
SSBP2-218ENST00000514493 NSD3Q9BZ95 1437 aa26.94■■□□□ 1.9
SSBP2-218ENST00000514493 LTBP4Q8N2S1 1624 aa26.94■■□□□ 1.9
SSBP2-218ENST00000514493 A0A1W2PP64 1363 aa26.94■■□□□ 1.9
SSBP2-218ENST00000514493 NPC1L1Q9UHC9 1359 aa26.94■■□□□ 1.9
SSBP2-218ENST00000514493 MON2Q7Z3U7 1717 aa26.93■■□□□ 1.9
SSBP2-218ENST00000514493 PRR36Q9H6K5 1346 aa26.92■■□□□ 1.9
SSBP2-218ENST00000514493 NUDT16Q96DE0 195 aaKnown RBP26.92■■□□□ 1.9
SSBP2-218ENST00000514493 CARD14Q9BXL6 1004 aa26.92■■□□□ 1.9
SSBP2-218ENST00000514493 ANKARQ7Z5J8 1434 aa26.92■■□□□ 1.9
SSBP2-218ENST00000514493 PARD3Q8TEW0 1356 aa26.92■■□□□ 1.9
SSBP2-218ENST00000514493 AMER1Q5JTC6 1135 aaPredicted RBP26.91■■□□□ 1.9
SSBP2-218ENST00000514493 RBM33Q96EV2 1170 aaKnown RBP26.91■■□□□ 1.9
SSBP2-218ENST00000514493 CCDC61Q9Y6R9 512 aa26.89■■□□□ 1.9
SSBP2-218ENST00000514493 XIRP1Q702N8 1843 aaKnown RBP26.89■■□□□ 1.9
SSBP2-218ENST00000514493 TERF2IPQ9NYB0 399 aa26.89■■□□□ 1.89
SSBP2-218ENST00000514493 CABP1Q9NZU7 370 aa26.89■■□□□ 1.89
SSBP2-218ENST00000514493 KIF20BQ96Q89 1820 aa26.88■■□□□ 1.89
SSBP2-218ENST00000514493 RALBP1Q15311 655 aa26.87■■□□□ 1.89
SSBP2-218ENST00000514493 YTHDC1Q96MU7 727 aaKnown RBP26.87■■□□□ 1.89
SSBP2-218ENST00000514493 NCOA3Q9Y6Q9 1424 aa26.87■■□□□ 1.89
SSBP2-218ENST00000514493 ANKRD26Q9UPS8 1709 aa26.87■■□□□ 1.89
SSBP2-218ENST00000514493 CPSF1Q10570 1443 aaKnown RBP26.86■■□□□ 1.89
SSBP2-218ENST00000514493 PROSER2Q86WR7 435 aaPredicted RBP26.86■■□□□ 1.89
SSBP2-218ENST00000514493 CNGB1Q14028 1251 aaPredicted RBP26.86■■□□□ 1.89
SSBP2-218ENST00000514493 HDGFL2Q7Z4V5 671 aaPredicted RBP26.85■■□□□ 1.89
SSBP2-218ENST00000514493 CC2D1BQ5T0F9 858 aaKnown RBP26.84■■□□□ 1.89
SSBP2-218ENST00000514493 NRKQ7Z2Y5 1582 aa26.84■■□□□ 1.89
SSBP2-218ENST00000514493 TMEM94Q12767 1356 aa26.82■■□□□ 1.88
SSBP2-218ENST00000514493 CERKQ8TCT0 537 aa26.82■■□□□ 1.88
SSBP2-218ENST00000514493 CGNL1Q0VF96 1302 aa26.81■■□□□ 1.88
SSBP2-218ENST00000514493 NSD2O96028 1365 aa26.81■■□□□ 1.88
SSBP2-218ENST00000514493 NUTM2FA1L443 756 aa26.81■■□□□ 1.88
SSBP2-218ENST00000514493 C14orf37Q86TY3 774 aa26.81■■□□□ 1.88
SSBP2-218ENST00000514493 DCCP43146 1447 aa26.81■■□□□ 1.88
SSBP2-218ENST00000514493 MYBBP1AQ9BQG0 1328 aaKnown RBP26.8■■□□□ 1.88
SSBP2-218ENST00000514493 LRRC7Q96NW7 1537 aa26.8■■□□□ 1.88
SSBP2-218ENST00000514493 EDC4Q6P2E9 1401 aaKnown RBP26.79■■□□□ 1.88
SSBP2-218ENST00000514493 PLEKHG3A1L390 1219 aa26.79■■□□□ 1.88
SSBP2-218ENST00000514493 CENPBP07199 599 aaPredicted RBP26.76■■□□□ 1.88
SSBP2-218ENST00000514493 POLR3AO14802 1390 aaPredicted RBP26.76■■□□□ 1.87
SSBP2-218ENST00000514493 C19orf44Q9H6X5 657 aa26.74■■□□□ 1.87
SSBP2-218ENST00000514493 USP6P35125 1406 aa26.73■■□□□ 1.87
SSBP2-218ENST00000514493 ACEP12821 1306 aa26.73■■□□□ 1.87
SSBP2-218ENST00000514493 ZNF692Q9BU19 519 aaPredicted RBP26.73■■□□□ 1.87
SSBP2-218ENST00000514493 KIF1AQ12756 1690 aa26.73■■□□□ 1.87
SSBP2-218ENST00000514493 BRD4O60885 1362 aaPredicted RBP26.72■■□□□ 1.87
SSBP2-218ENST00000514493 CCDC184Q52MB2 194 aa26.71■■□□□ 1.87
SSBP2-218ENST00000514493 NLRP13Q86W25 1043 aa26.71■■□□□ 1.87
SSBP2-218ENST00000514493 MRS2Q9HD23 443 aa26.7■■□□□ 1.86
SSBP2-218ENST00000514493 MSH6P52701 1360 aa26.7■■□□□ 1.86
SSBP2-218ENST00000514493 MST1RQ04912 1400 aa26.68■■□□□ 1.86
SSBP2-218ENST00000514493 C1orf167Q5SNV9 1468 aa26.68■■□□□ 1.86
SSBP2-218ENST00000514493 PMFBP1Q8TBY8 1022 aa26.68■■□□□ 1.86
SSBP2-218ENST00000514493 SSH2Q76I76 1423 aa26.67■■□□□ 1.86
SSBP2-218ENST00000514493 FYB1O15117 783 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms