RNA–Protein interactions for RNA: ENST00000514348.1

TMEM173-213, Transcript of transmembrane protein 173, humanhuman

TSL 3

Gene TMEM173, Length 705 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-213ENST00000514348 YTHDC2Q9H6S0 1430 aaKnown RBP18.53■□□□□ 0.56
TMEM173-213ENST00000514348 L3MBTL2Q969R5 705 aa18.52■□□□□ 0.56
TMEM173-213ENST00000514348 DDX17Q92841 729 aaKnown RBP18.51■□□□□ 0.55
TMEM173-213ENST00000514348 KNDC1Q76NI1 1749 aa18.5■□□□□ 0.55
TMEM173-213ENST00000514348 ABCC11Q96J66 1382 aa18.5■□□□□ 0.55
TMEM173-213ENST00000514348 PRAG1Q86YV5 1406 aa18.49■□□□□ 0.55
TMEM173-213ENST00000514348 WAPLQ7Z5K2 1190 aa18.49■□□□□ 0.55
TMEM173-213ENST00000514348 TONSLQ96HA7 1378 aa18.48■□□□□ 0.55
TMEM173-213ENST00000514348 POTEAQ6S8J7 498 aa18.48■□□□□ 0.55
TMEM173-213ENST00000514348 TECPR2O15040 1411 aa18.48■□□□□ 0.55
TMEM173-213ENST00000514348 C1orf167Q5SNV9 1468 aa18.47■□□□□ 0.55
TMEM173-213ENST00000514348 TRAK1Q9UPV9 953 aa18.46■□□□□ 0.55
TMEM173-213ENST00000514348 POGKQ9P215 609 aa18.45■□□□□ 0.54
TMEM173-213ENST00000514348 ADGRB1O14514 1584 aa18.45■□□□□ 0.54
TMEM173-213ENST00000514348 CDC42BPGQ6DT37 1551 aa18.45■□□□□ 0.54
TMEM173-213ENST00000514348 PLEKHH1Q9ULM0 1364 aa18.44■□□□□ 0.54
TMEM173-213ENST00000514348 SAFB2Q14151 953 aaKnown RBP eCLIP18.44■□□□□ 0.54
TMEM173-213ENST00000514348 PRAM1Q96QH2 718 aa18.44■□□□□ 0.54
TMEM173-213ENST00000514348 SIRT1Q96EB6 747 aa18.43■□□□□ 0.54
TMEM173-213ENST00000514348 ORAI2Q96SN7 254 aa18.43■□□□□ 0.54
TMEM173-213ENST00000514348 NUTM2BA6NNL0 878 aaPredicted RBP18.42■□□□□ 0.54
TMEM173-213ENST00000514348 NUTM2EB1AL46 878 aaPredicted RBP18.42■□□□□ 0.54
TMEM173-213ENST00000514348 NUTM2AQ8IVF1 878 aaPredicted RBP18.42■□□□□ 0.54
TMEM173-213ENST00000514348 CCER1Q8TC90 406 aaPredicted RBP18.42■□□□□ 0.54
TMEM173-213ENST00000514348 SPATA31A6Q5VVP1 1343 aa18.42■□□□□ 0.54
TMEM173-213ENST00000514348 RGPD8O14715 1765 aaPredicted RBP18.42■□□□□ 0.54
TMEM173-213ENST00000514348 MEX3CQ5U5Q3 659 aaKnown RBP18.41■□□□□ 0.54
TMEM173-213ENST00000514348 FMN2Q9NZ56 1722 aa18.4■□□□□ 0.54
TMEM173-213ENST00000514348 DLC1Q96QB1 1528 aa18.4■□□□□ 0.54
TMEM173-213ENST00000514348 NBPF1Q3BBV0 1214 aa18.4■□□□□ 0.54
TMEM173-213ENST00000514348 KIAA1210Q9ULL0 1709 aa18.4■□□□□ 0.54
TMEM173-213ENST00000514348 NUTM2FA1L443 756 aa18.39■□□□□ 0.53
TMEM173-213ENST00000514348 PNPLA6Q8IY17 1366 aa18.39■□□□□ 0.53
TMEM173-213ENST00000514348 CLSPNQ9HAW4 1339 aa18.37■□□□□ 0.53
TMEM173-213ENST00000514348 ROCK2O75116 1388 aaKnown RBP18.36■□□□□ 0.53
TMEM173-213ENST00000514348 MINK1Q8N4C8 1332 aaPredicted RBP18.36■□□□□ 0.53
TMEM173-213ENST00000514348 NBPF8Q3BBV2 869 aa18.35■□□□□ 0.53
TMEM173-213ENST00000514348 LRRC59Q96AG4 307 aaKnown RBP18.34■□□□□ 0.53
TMEM173-213ENST00000514348 HIRIP3Q9BW71 556 aaPredicted RBP18.34■□□□□ 0.53
TMEM173-213ENST00000514348 ESCO1Q5FWF5 840 aa18.33■□□□□ 0.52
TMEM173-213ENST00000514348 TRPM1Q7Z4N2 1603 aa18.33■□□□□ 0.52
TMEM173-213ENST00000514348 ARHGEF28Q8N1W1 1705 aaKnown RBP18.32■□□□□ 0.52
TMEM173-213ENST00000514348 XPCQ01831 940 aaPredicted RBP18.32■□□□□ 0.52
TMEM173-213ENST00000514348 PXDNQ92626 1479 aa18.32■□□□□ 0.52
TMEM173-213ENST00000514348 COL22A1Q8NFW1 1626 aaPredicted RBP18.31■□□□□ 0.52
TMEM173-213ENST00000514348 SOS2Q07890 1332 aaPredicted RBP18.31■□□□□ 0.52
TMEM173-213ENST00000514348 AFF2P51816 1311 aa18.3■□□□□ 0.52
TMEM173-213ENST00000514348 KIF1AQ12756 1690 aa18.3■□□□□ 0.52
TMEM173-213ENST00000514348 MARF1Q9Y4F3 1742 aaKnown RBP18.29■□□□□ 0.52
TMEM173-213ENST00000514348 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
TMEM173-213ENST00000514348 USP32Q8NFA0 1604 aa18.29■□□□□ 0.52
TMEM173-213ENST00000514348 CENPJQ9HC77 1338 aaPredicted RBP18.28■□□□□ 0.52
TMEM173-213ENST00000514348 FOXO3O43524 673 aa18.28■□□□□ 0.52
TMEM173-213ENST00000514348 ADAMTS2O95450 1211 aa18.28■□□□□ 0.52
TMEM173-213ENST00000514348 CARD11Q9BXL7 1154 aa18.28■□□□□ 0.52
TMEM173-213ENST00000514348 ADGRB2O60241 1585 aa18.27■□□□□ 0.52
TMEM173-213ENST00000514348 ZNF772Q68DY9 489 aaPredicted RBP18.27■□□□□ 0.52
TMEM173-213ENST00000514348 EIF3AQ14152 1382 aaKnown RBP18.27■□□□□ 0.51
TMEM173-213ENST00000514348 RALGAPBQ86X10 1494 aa18.26■□□□□ 0.51
TMEM173-213ENST00000514348 NPHP3Q7Z494 1330 aa18.26■□□□□ 0.51
TMEM173-213ENST00000514348 WASLO00401 505 aaPredicted RBP18.26■□□□□ 0.51
TMEM173-213ENST00000514348 TIMELESSQ9UNS1 1208 aa18.25■□□□□ 0.51
TMEM173-213ENST00000514348 GPRASP1Q5JY77 1395 aa18.24■□□□□ 0.51
TMEM173-213ENST00000514348 ANKARQ7Z5J8 1434 aa18.23■□□□□ 0.51
TMEM173-213ENST00000514348 PHF8Q9UPP1 1060 aa18.23■□□□□ 0.51
TMEM173-213ENST00000514348 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
TMEM173-213ENST00000514348 ABCA3Q99758 1704 aa18.21■□□□□ 0.51
TMEM173-213ENST00000514348 TULP4Q9NRJ4 1543 aa18.21■□□□□ 0.51
TMEM173-213ENST00000514348 QRICH2Q9H0J4 1663 aa18.21■□□□□ 0.51
TMEM173-213ENST00000514348 RXRBP28702 533 aa18.2■□□□□ 0.5
TMEM173-213ENST00000514348 SRPK2P78362 688 aaKnown RBP18.2■□□□□ 0.5
TMEM173-213ENST00000514348 PMFBP1Q8TBY8 1022 aa18.2■□□□□ 0.5
TMEM173-213ENST00000514348 NGLY1Q96IV0 654 aa18.2■□□□□ 0.5
TMEM173-213ENST00000514348 PRR36Q9H6K5 1346 aa18.2■□□□□ 0.5
TMEM173-213ENST00000514348 RGS12O14924 1447 aa18.19■□□□□ 0.5
TMEM173-213ENST00000514348 PLEKHG5O94827 1062 aa18.18■□□□□ 0.5
TMEM173-213ENST00000514348 NUDT16Q96DE0 195 aaKnown RBP18.18■□□□□ 0.5
TMEM173-213ENST00000514348 QTRT2Q9H974 415 aaKnown RBP18.17■□□□□ 0.5
TMEM173-213ENST00000514348 TRPM3Q9HCF6 1732 aaPredicted RBP18.17■□□□□ 0.5
TMEM173-213ENST00000514348 EVC2Q86UK5 1308 aa18.17■□□□□ 0.5
TMEM173-213ENST00000514348 PSME1Q06323 249 aa18.16■□□□□ 0.5
TMEM173-213ENST00000514348 KRT28Q7Z3Y7 464 aa18.16■□□□□ 0.5
TMEM173-213ENST00000514348 NGDNQ8NEJ9 315 aaKnown RBP18.16■□□□□ 0.5
TMEM173-213ENST00000514348 CABP2Q9NPB3 220 aa18.16■□□□□ 0.5
TMEM173-213ENST00000514348 SPATA31A3Q5VYP0 1347 aa18.16■□□□□ 0.5
TMEM173-213ENST00000514348 CDK12Q9NYV4 1490 aaPredicted RBP18.15■□□□□ 0.5
TMEM173-213ENST00000514348 ITSN1Q15811 1721 aa18.15■□□□□ 0.5
TMEM173-213ENST00000514348 TNS3Q68CZ2 1445 aa18.15■□□□□ 0.5
TMEM173-213ENST00000514348 ATP7BP35670 1465 aa18.14■□□□□ 0.5
TMEM173-213ENST00000514348 USP21Q9UK80 565 aa18.14■□□□□ 0.49
TMEM173-213ENST00000514348 PLCH1Q4KWH8 1693 aa18.14■□□□□ 0.49
TMEM173-213ENST00000514348 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.13■□□□□ 0.49
TMEM173-213ENST00000514348 CCDC61Q9Y6R9 512 aa18.13■□□□□ 0.49
TMEM173-213ENST00000514348 ALS2Q96Q42 1657 aa18.12■□□□□ 0.49
TMEM173-213ENST00000514348 RBM6P78332 1123 aaKnown RBP18.11■□□□□ 0.49
TMEM173-213ENST00000514348 LMOD2Q6P5Q4 547 aa18.11■□□□□ 0.49
TMEM173-213ENST00000514348 CABLES1Q8TDN4 633 aa18.11■□□□□ 0.49
TMEM173-213ENST00000514348 ATRNO75882 1429 aa18.11■□□□□ 0.49
TMEM173-213ENST00000514348 TOPAZ1Q8N9V7 1692 aa18.1■□□□□ 0.49
TMEM173-213ENST00000514348 BCL9LQ86UU0 1499 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms