RNA–Protein interactions for RNA: ENST00000513080.5

SPOP-218, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 4

Gene SPOP, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-218ENST00000513080 COL16A1Q07092 1604 aaPredicted RBP21.14■□□□□ 0.97
SPOP-218ENST00000513080 CDC42BPGQ6DT37 1551 aa21.13■□□□□ 0.97
SPOP-218ENST00000513080 NEUROD1Q13562 356 aa21.1■□□□□ 0.97
SPOP-218ENST00000513080 PRAM1Q96QH2 718 aa21.1■□□□□ 0.97
SPOP-218ENST00000513080 TRAK1Q9UPV9 953 aa21.1■□□□□ 0.97
SPOP-218ENST00000513080 NHSL1Q5SYE7 1610 aa21.1■□□□□ 0.97
SPOP-218ENST00000513080 JCADQ9P266 1359 aa21.1■□□□□ 0.97
SPOP-218ENST00000513080 DLC1Q96QB1 1528 aa21.09■□□□□ 0.97
SPOP-218ENST00000513080 ORAI2Q96SN7 254 aa21.09■□□□□ 0.97
SPOP-218ENST00000513080 POGKQ9P215 609 aa21.09■□□□□ 0.97
SPOP-218ENST00000513080 SAFB2Q14151 953 aaKnown RBP eCLIP21.08■□□□□ 0.97
SPOP-218ENST00000513080 DDX17Q92841 729 aaKnown RBP21.08■□□□□ 0.97
SPOP-218ENST00000513080 NUTM2FA1L443 756 aa21.07■□□□□ 0.96
SPOP-218ENST00000513080 L3MBTL2Q969R5 705 aa21.07■□□□□ 0.96
SPOP-218ENST00000513080 KIAA1210Q9ULL0 1709 aa21.06■□□□□ 0.96
SPOP-218ENST00000513080 FMN2Q9NZ56 1722 aa21.05■□□□□ 0.96
SPOP-218ENST00000513080 ESCO1Q5FWF5 840 aa21.05■□□□□ 0.96
SPOP-218ENST00000513080 ILDR2Q71H61 639 aa21.04■□□□□ 0.96
SPOP-218ENST00000513080 SHPRHQ149N8 1683 aa21.03■□□□□ 0.96
SPOP-218ENST00000513080 LRRC59Q96AG4 307 aaKnown RBP21.02■□□□□ 0.96
SPOP-218ENST00000513080 NBPF1Q3BBV0 1214 aa21.01■□□□□ 0.95
SPOP-218ENST00000513080 SPATA31A6Q5VVP1 1343 aa21.01■□□□□ 0.95
SPOP-218ENST00000513080 ARHGEF28Q8N1W1 1705 aaKnown RBP21.01■□□□□ 0.95
SPOP-218ENST00000513080 RGPD8O14715 1765 aaPredicted RBP21■□□□□ 0.95
SPOP-218ENST00000513080 HIRIP3Q9BW71 556 aaPredicted RBP20.99■□□□□ 0.95
SPOP-218ENST00000513080 SOS2Q07890 1332 aaPredicted RBP20.99■□□□□ 0.95
SPOP-218ENST00000513080 MINK1Q8N4C8 1332 aaPredicted RBP20.99■□□□□ 0.95
SPOP-218ENST00000513080 ADGRB2O60241 1585 aa20.97■□□□□ 0.95
SPOP-218ENST00000513080 FOXO3O43524 673 aa20.97■□□□□ 0.95
SPOP-218ENST00000513080 NPHP3Q7Z494 1330 aa20.97■□□□□ 0.95
SPOP-218ENST00000513080 LRP6O75581 1613 aa20.95■□□□□ 0.94
SPOP-218ENST00000513080 KIF1AQ12756 1690 aa20.94■□□□□ 0.94
SPOP-218ENST00000513080 NUTM2BA6NNL0 878 aaPredicted RBP20.94■□□□□ 0.94
SPOP-218ENST00000513080 NUTM2EB1AL46 878 aaPredicted RBP20.94■□□□□ 0.94
SPOP-218ENST00000513080 NUTM2AQ8IVF1 878 aaPredicted RBP20.94■□□□□ 0.94
SPOP-218ENST00000513080 RGS17Q9UGC6 210 aaPredicted RBP20.94■□□□□ 0.94
SPOP-218ENST00000513080 PNPLA6Q8IY17 1366 aa20.94■□□□□ 0.94
SPOP-218ENST00000513080 XPCQ01831 940 aaPredicted RBP20.93■□□□□ 0.94
SPOP-218ENST00000513080 PCGF6Q9BYE7 350 aa20.93■□□□□ 0.94
SPOP-218ENST00000513080 PHF8Q9UPP1 1060 aa20.93■□□□□ 0.94
SPOP-218ENST00000513080 TRPM1Q7Z4N2 1603 aa20.93■□□□□ 0.94
SPOP-218ENST00000513080 USP32Q8NFA0 1604 aa20.93■□□□□ 0.94
SPOP-218ENST00000513080 WASLO00401 505 aaPredicted RBP20.92■□□□□ 0.94
SPOP-218ENST00000513080 MEX3CQ5U5Q3 659 aaKnown RBP20.92■□□□□ 0.94
SPOP-218ENST00000513080 ANKARQ7Z5J8 1434 aa20.92■□□□□ 0.94
SPOP-218ENST00000513080 PXDNQ92626 1479 aa20.92■□□□□ 0.94
SPOP-218ENST00000513080 TONSLQ96HA7 1378 aa20.91■□□□□ 0.94
SPOP-218ENST00000513080 EIF3AQ14152 1382 aaKnown RBP20.89■□□□□ 0.93
SPOP-218ENST00000513080 NBPF8Q3BBV2 869 aa20.89■□□□□ 0.93
SPOP-218ENST00000513080 TULP4Q9NRJ4 1543 aa20.88■□□□□ 0.93
SPOP-218ENST00000513080 PRR36Q9H6K5 1346 aa20.87■□□□□ 0.93
SPOP-218ENST00000513080 KRT28Q7Z3Y7 464 aa20.87■□□□□ 0.93
SPOP-218ENST00000513080 PMFBP1Q8TBY8 1022 aa20.87■□□□□ 0.93
SPOP-218ENST00000513080 ROCK2O75116 1388 aaKnown RBP20.86■□□□□ 0.93
SPOP-218ENST00000513080 CENPJQ9HC77 1338 aaPredicted RBP20.86■□□□□ 0.93
SPOP-218ENST00000513080 PSME1Q06323 249 aa20.85■□□□□ 0.93
SPOP-218ENST00000513080 CDK19Q9BWU1 502 aa20.85■□□□□ 0.93
SPOP-218ENST00000513080 COL22A1Q8NFW1 1626 aaPredicted RBP20.85■□□□□ 0.93
SPOP-218ENST00000513080 POTEAQ6S8J7 498 aa20.84■□□□□ 0.93
SPOP-218ENST00000513080 NUDT16Q96DE0 195 aaKnown RBP20.83■□□□□ 0.93
SPOP-218ENST00000513080 QRICH2Q9H0J4 1663 aa20.83■□□□□ 0.92
SPOP-218ENST00000513080 SPATA31A3Q5VYP0 1347 aa20.82■□□□□ 0.92
SPOP-218ENST00000513080 SOCS7O14512 581 aa20.82■□□□□ 0.92
SPOP-218ENST00000513080 ADAMTS2O95450 1211 aa20.82■□□□□ 0.92
SPOP-218ENST00000513080 ITSN1Q15811 1721 aa20.81■□□□□ 0.92
SPOP-218ENST00000513080 C8orf37Q96NL8 207 aa20.81■□□□□ 0.92
SPOP-218ENST00000513080 ATP7BP35670 1465 aa20.81■□□□□ 0.92
SPOP-218ENST00000513080 ZNF772Q68DY9 489 aaPredicted RBP20.8■□□□□ 0.92
SPOP-218ENST00000513080 NGDNQ8NEJ9 315 aaKnown RBP20.79■□□□□ 0.92
SPOP-218ENST00000513080 SBNO1A3KN83 1393 aa20.79■□□□□ 0.92
SPOP-218ENST00000513080 GPRASP1Q5JY77 1395 aa20.79■□□□□ 0.92
SPOP-218ENST00000513080 TNS3Q68CZ2 1445 aa20.78■□□□□ 0.92
SPOP-218ENST00000513080 AFF2P51816 1311 aa20.78■□□□□ 0.92
SPOP-218ENST00000513080 SRPK2P78362 688 aaKnown RBP20.77■□□□□ 0.92
SPOP-218ENST00000513080 LMOD2Q6P5Q4 547 aa20.77■□□□□ 0.92
SPOP-218ENST00000513080 CARD11Q9BXL7 1154 aa20.77■□□□□ 0.92
SPOP-218ENST00000513080 CCDC61Q9Y6R9 512 aa20.77■□□□□ 0.92
SPOP-218ENST00000513080 RALGAPBQ86X10 1494 aa20.76■□□□□ 0.91
SPOP-218ENST00000513080 NGLY1Q96IV0 654 aa20.76■□□□□ 0.91
SPOP-218ENST00000513080 TOPAZ1Q8N9V7 1692 aa20.76■□□□□ 0.91
SPOP-218ENST00000513080 TRPM3Q9HCF6 1732 aaPredicted RBP20.75■□□□□ 0.91
SPOP-218ENST00000513080 CABP2Q9NPB3 220 aa20.75■□□□□ 0.91
SPOP-218ENST00000513080 MARF1Q9Y4F3 1742 aaKnown RBP20.74■□□□□ 0.91
SPOP-218ENST00000513080 ARHGEF10O15013 1369 aa20.73■□□□□ 0.91
SPOP-218ENST00000513080 CLSPNQ9HAW4 1339 aa20.73■□□□□ 0.91
SPOP-218ENST00000513080 PLEKHG3A1L390 1219 aa20.72■□□□□ 0.91
SPOP-218ENST00000513080 PLEKHG5O94827 1062 aa20.72■□□□□ 0.91
SPOP-218ENST00000513080 EVC2Q86UK5 1308 aa20.72■□□□□ 0.91
SPOP-218ENST00000513080 PAK3O75914 559 aaPredicted RBP20.71■□□□□ 0.91
SPOP-218ENST00000513080 CABLES1Q8TDN4 633 aa20.71■□□□□ 0.91
SPOP-218ENST00000513080 ACEP12821 1306 aa20.71■□□□□ 0.91
SPOP-218ENST00000513080 ALS2Q96Q42 1657 aa20.7■□□□□ 0.91
SPOP-218ENST00000513080 HAP1P54257 671 aaPredicted RBP20.7■□□□□ 0.9
SPOP-218ENST00000513080 POLR3AO14802 1390 aaPredicted RBP20.7■□□□□ 0.9
SPOP-218ENST00000513080 PPIP5K1Q6PFW1 1433 aa20.7■□□□□ 0.9
SPOP-218ENST00000513080 RXRBP28702 533 aa20.68■□□□□ 0.9
SPOP-218ENST00000513080 FNBP4Q8N3X1 1017 aaPredicted RBP20.68■□□□□ 0.9
SPOP-218ENST00000513080 QTRT2Q9H974 415 aaKnown RBP20.68■□□□□ 0.9
SPOP-218ENST00000513080 USP21Q9UK80 565 aa20.68■□□□□ 0.9
SPOP-218ENST00000513080 ABCA3Q99758 1704 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms