RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 CDC42BPGQ6DT37 1551 aa17.99■□□□□ 0.47
PTCD2-209ENST00000511752 PHLPP1O60346 1717 aa17.98■□□□□ 0.47
PTCD2-209ENST00000511752 PLEKHH1Q9ULM0 1364 aa17.97■□□□□ 0.47
PTCD2-209ENST00000511752 POGKQ9P215 609 aa17.96■□□□□ 0.47
PTCD2-209ENST00000511752 ADRA2BP18089 450 aa17.95■□□□□ 0.46
PTCD2-209ENST00000511752 BRINP3Q76B58 766 aa17.95■□□□□ 0.46
PTCD2-209ENST00000511752 PRAM1Q96QH2 718 aa17.95■□□□□ 0.46
PTCD2-209ENST00000511752 TRAK1Q9UPV9 953 aa17.95■□□□□ 0.46
PTCD2-209ENST00000511752 C1orf167Q5SNV9 1468 aa17.95■□□□□ 0.46
PTCD2-209ENST00000511752 TONSLQ96HA7 1378 aa17.94■□□□□ 0.46
PTCD2-209ENST00000511752 AHDC1Q5TGY3 1603 aaPredicted RBP17.94■□□□□ 0.46
PTCD2-209ENST00000511752 ARHGEF28Q8N1W1 1705 aaKnown RBP17.92■□□□□ 0.46
PTCD2-209ENST00000511752 SAFB2Q14151 953 aaKnown RBP eCLIP17.92■□□□□ 0.46
PTCD2-209ENST00000511752 FMN2Q9NZ56 1722 aa17.92■□□□□ 0.46
PTCD2-209ENST00000511752 COL16A1Q07092 1604 aaPredicted RBP17.9■□□□□ 0.46
PTCD2-209ENST00000511752 NHSL1Q5SYE7 1610 aa17.9■□□□□ 0.46
PTCD2-209ENST00000511752 TRPM1Q7Z4N2 1603 aa17.9■□□□□ 0.46
PTCD2-209ENST00000511752 ADGRB2O60241 1585 aa17.89■□□□□ 0.45
PTCD2-209ENST00000511752 NBPF1Q3BBV0 1214 aa17.89■□□□□ 0.45
PTCD2-209ENST00000511752 ORAI2Q96SN7 254 aa17.88■□□□□ 0.45
PTCD2-209ENST00000511752 NUTM2FA1L443 756 aa17.87■□□□□ 0.45
PTCD2-209ENST00000511752 CLSPNQ9HAW4 1339 aa17.87■□□□□ 0.45
PTCD2-209ENST00000511752 MED1Q15648 1581 aaPredicted RBP17.87■□□□□ 0.45
PTCD2-209ENST00000511752 ESCO1Q5FWF5 840 aa17.86■□□□□ 0.45
PTCD2-209ENST00000511752 MINK1Q8N4C8 1332 aaPredicted RBP17.86■□□□□ 0.45
PTCD2-209ENST00000511752 JCADQ9P266 1359 aa17.86■□□□□ 0.45
PTCD2-209ENST00000511752 ROCK2O75116 1388 aaKnown RBP17.85■□□□□ 0.45
PTCD2-209ENST00000511752 DISP3Q9P2K9 1392 aa17.85■□□□□ 0.45
PTCD2-209ENST00000511752 EIF3AQ14152 1382 aaKnown RBP17.84■□□□□ 0.45
PTCD2-209ENST00000511752 HIRIP3Q9BW71 556 aaPredicted RBP17.84■□□□□ 0.45
PTCD2-209ENST00000511752 RGPD8O14715 1765 aaPredicted RBP17.84■□□□□ 0.45
PTCD2-209ENST00000511752 KIF1AQ12756 1690 aa17.83■□□□□ 0.45
PTCD2-209ENST00000511752 NBPF8Q3BBV2 869 aa17.83■□□□□ 0.44
PTCD2-209ENST00000511752 SHPRHQ149N8 1683 aa17.83■□□□□ 0.44
PTCD2-209ENST00000511752 ANKARQ7Z5J8 1434 aa17.82■□□□□ 0.44
PTCD2-209ENST00000511752 DDX17Q92841 729 aaKnown RBP17.82■□□□□ 0.44
PTCD2-209ENST00000511752 LRRC59Q96AG4 307 aaKnown RBP17.82■□□□□ 0.44
PTCD2-209ENST00000511752 NPHP3Q7Z494 1330 aa17.81■□□□□ 0.44
PTCD2-209ENST00000511752 WASLO00401 505 aaPredicted RBP17.81■□□□□ 0.44
PTCD2-209ENST00000511752 CENPJQ9HC77 1338 aaPredicted RBP17.8■□□□□ 0.44
PTCD2-209ENST00000511752 TULP4Q9NRJ4 1543 aa17.8■□□□□ 0.44
PTCD2-209ENST00000511752 USP32Q8NFA0 1604 aa17.8■□□□□ 0.44
PTCD2-209ENST00000511752 SOS2Q07890 1332 aaPredicted RBP17.79■□□□□ 0.44
PTCD2-209ENST00000511752 CCER1Q8TC90 406 aaPredicted RBP17.79■□□□□ 0.44
PTCD2-209ENST00000511752 QRICH2Q9H0J4 1663 aa17.79■□□□□ 0.44
PTCD2-209ENST00000511752 GPRASP1Q5JY77 1395 aa17.79■□□□□ 0.44
PTCD2-209ENST00000511752 SPATA31A6Q5VVP1 1343 aa17.78■□□□□ 0.44
PTCD2-209ENST00000511752 RALGAPBQ86X10 1494 aa17.78■□□□□ 0.44
PTCD2-209ENST00000511752 FOXO3O43524 673 aa17.78■□□□□ 0.44
PTCD2-209ENST00000511752 PHF8Q9UPP1 1060 aa17.78■□□□□ 0.44
PTCD2-209ENST00000511752 TIMELESSQ9UNS1 1208 aa17.77■□□□□ 0.44
PTCD2-209ENST00000511752 ITSN1Q15811 1721 aa17.77■□□□□ 0.44
PTCD2-209ENST00000511752 PXDNQ92626 1479 aa17.75■□□□□ 0.43
PTCD2-209ENST00000511752 CARD11Q9BXL7 1154 aa17.75■□□□□ 0.43
PTCD2-209ENST00000511752 PNPLA6Q8IY17 1366 aa17.75■□□□□ 0.43
PTCD2-209ENST00000511752 CDK19Q9BWU1 502 aa17.74■□□□□ 0.43
PTCD2-209ENST00000511752 PRR36Q9H6K5 1346 aa17.73■□□□□ 0.43
PTCD2-209ENST00000511752 XPCQ01831 940 aaPredicted RBP17.73■□□□□ 0.43
PTCD2-209ENST00000511752 ATP7BP35670 1465 aa17.73■□□□□ 0.43
PTCD2-209ENST00000511752 PSME1Q06323 249 aa17.72■□□□□ 0.43
PTCD2-209ENST00000511752 KRT28Q7Z3Y7 464 aa17.72■□□□□ 0.43
PTCD2-209ENST00000511752 PMFBP1Q8TBY8 1022 aa17.72■□□□□ 0.43
PTCD2-209ENST00000511752 NUDT16Q96DE0 195 aaKnown RBP17.72■□□□□ 0.43
PTCD2-209ENST00000511752 MEX3CQ5U5Q3 659 aaKnown RBP17.71■□□□□ 0.43
PTCD2-209ENST00000511752 LRP6O75581 1613 aa17.71■□□□□ 0.43
PTCD2-209ENST00000511752 NUTM2BA6NNL0 878 aaPredicted RBP17.7■□□□□ 0.42
PTCD2-209ENST00000511752 NUTM2EB1AL46 878 aaPredicted RBP17.7■□□□□ 0.42
PTCD2-209ENST00000511752 SRPK2P78362 688 aaKnown RBP17.7■□□□□ 0.42
PTCD2-209ENST00000511752 NUTM2AQ8IVF1 878 aaPredicted RBP17.7■□□□□ 0.42
PTCD2-209ENST00000511752 TOPAZ1Q8N9V7 1692 aa17.7■□□□□ 0.42
PTCD2-209ENST00000511752 EVC2Q86UK5 1308 aa17.7■□□□□ 0.42
PTCD2-209ENST00000511752 COL22A1Q8NFW1 1626 aaPredicted RBP17.69■□□□□ 0.42
PTCD2-209ENST00000511752 NGDNQ8NEJ9 315 aaKnown RBP17.68■□□□□ 0.42
PTCD2-209ENST00000511752 CCDC61Q9Y6R9 512 aa17.68■□□□□ 0.42
PTCD2-209ENST00000511752 SPATA31A3Q5VYP0 1347 aa17.67■□□□□ 0.42
PTCD2-209ENST00000511752 SBNO1A3KN83 1393 aa17.66■□□□□ 0.42
PTCD2-209ENST00000511752 SBNO2Q9Y2G9 1366 aa17.66■□□□□ 0.42
PTCD2-209ENST00000511752 TNS3Q68CZ2 1445 aa17.66■□□□□ 0.42
PTCD2-209ENST00000511752 TRPM3Q9HCF6 1732 aaPredicted RBP17.65■□□□□ 0.42
PTCD2-209ENST00000511752 CABP2Q9NPB3 220 aa17.65■□□□□ 0.42
PTCD2-209ENST00000511752 ARHGEF10O15013 1369 aa17.64■□□□□ 0.41
PTCD2-209ENST00000511752 PPIP5K1Q6PFW1 1433 aa17.64■□□□□ 0.41
PTCD2-209ENST00000511752 PLEKHG3A1L390 1219 aa17.63■□□□□ 0.41
PTCD2-209ENST00000511752 LMOD2Q6P5Q4 547 aa17.63■□□□□ 0.41
PTCD2-209ENST00000511752 POLR3AO14802 1390 aaPredicted RBP17.63■□□□□ 0.41
PTCD2-209ENST00000511752 ACEP12821 1306 aa17.62■□□□□ 0.41
PTCD2-209ENST00000511752 ILDR2Q71H61 639 aa17.61■□□□□ 0.41
PTCD2-209ENST00000511752 RGS17Q9UGC6 210 aaPredicted RBP17.61■□□□□ 0.41
PTCD2-209ENST00000511752 ALS2Q96Q42 1657 aa17.61■□□□□ 0.41
PTCD2-209ENST00000511752 MARF1Q9Y4F3 1742 aaKnown RBP17.61■□□□□ 0.41
PTCD2-209ENST00000511752 SLC24A1O60721 1099 aa17.6■□□□□ 0.41
PTCD2-209ENST00000511752 PAK3O75914 559 aaPredicted RBP17.6■□□□□ 0.41
PTCD2-209ENST00000511752 ADAMTS2O95450 1211 aa17.6■□□□□ 0.41
PTCD2-209ENST00000511752 ATAD2Q6PL18 1390 aa17.6■□□□□ 0.41
PTCD2-209ENST00000511752 USP47Q96K76 1375 aa17.59■□□□□ 0.41
PTCD2-209ENST00000511752 ST20-MTHFSA0A0A6YYL1 179 aa17.59■□□□□ 0.41
PTCD2-209ENST00000511752 HAP1P54257 671 aaPredicted RBP17.59■□□□□ 0.41
PTCD2-209ENST00000511752 ZNF772Q68DY9 489 aaPredicted RBP17.59■□□□□ 0.41
PTCD2-209ENST00000511752 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
PTCD2-209ENST00000511752 C8orf37Q96NL8 207 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms