RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 ANO8Q9HCE9 1232 aaPredicted RBP10.5□□□□□ -0.73
RAB28-207ENST00000511649 ZNF644Q9H582 1327 aaPredicted RBP10.5□□□□□ -0.73
RAB28-207ENST00000511649 ADGBQ8N7X0 1667 aa10.5□□□□□ -0.73
RAB28-207ENST00000511649 EHBP1L1Q8N3D4 1523 aa10.49□□□□□ -0.73
RAB28-207ENST00000511649 SPDYE16A6NNV3 312 aaPredicted RBP10.49□□□□□ -0.73
RAB28-207ENST00000511649 MROH2AA6NES4 1674 aa10.48□□□□□ -0.73
RAB28-207ENST00000511649 CLTCQ00610 1675 aaKnown RBP10.48□□□□□ -0.73
RAB28-207ENST00000511649 HNRNPMP52272 730 aaKnown RBP eCLIP10.48□□□□□ -0.732e-6■■■■□ 25.1
RAB28-207ENST00000511649 VARS2Q5ST30 1063 aaKnown RBP10.48□□□□□ -0.73
RAB28-207ENST00000511649 FBXO41Q8TF61 875 aa10.48□□□□□ -0.73
RAB28-207ENST00000511649 SETD1BQ9UPS6 1966 aaKnown RBP10.48□□□□□ -0.73
RAB28-207ENST00000511649 KIAA1107Q9UPP5 1409 aa10.48□□□□□ -0.73
RAB28-207ENST00000511649 ZNF777Q9ULD5 760 aaPredicted RBP10.46□□□□□ -0.73
RAB28-207ENST00000511649 MYO3AQ8NEV4 1616 aa10.46□□□□□ -0.74
RAB28-207ENST00000511649 ZNF142P52746 1687 aaPredicted RBP10.45□□□□□ -0.74
RAB28-207ENST00000511649 LTBP4Q8N2S1 1624 aa10.45□□□□□ -0.74
RAB28-207ENST00000511649 UHRF1BP1Q6BDS2 1440 aa10.45□□□□□ -0.74
RAB28-207ENST00000511649 A2MP01023 1474 aa10.44□□□□□ -0.74
RAB28-207ENST00000511649 NCOA2Q15596 1464 aa10.44□□□□□ -0.74
RAB28-207ENST00000511649 NCOA1Q15788 1441 aa10.44□□□□□ -0.74
RAB28-207ENST00000511649 CCNB3Q8WWL7 1395 aa10.44□□□□□ -0.74
RAB28-207ENST00000511649 PSDA5PKW4 1024 aaPredicted RBP10.44□□□□□ -0.74
RAB28-207ENST00000511649 PTGER2P43116 358 aa10.44□□□□□ -0.74
RAB28-207ENST00000511649 CAMSAP2Q08AD1 1489 aa10.43□□□□□ -0.74
RAB28-207ENST00000511649 MTUS2Q5JR59 1369 aa10.43□□□□□ -0.74
RAB28-207ENST00000511649 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
RAB28-207ENST00000511649 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
RAB28-207ENST00000511649 PTPRKQ15262 1439 aa10.42□□□□□ -0.74
RAB28-207ENST00000511649 SPAG9O60271 1321 aaKnown RBP10.42□□□□□ -0.74
RAB28-207ENST00000511649 FOSBP53539 338 aa10.42□□□□□ -0.74
RAB28-207ENST00000511649 CFDP1Q9UEE9 299 aaPredicted RBP10.42□□□□□ -0.74
RAB28-207ENST00000511649 PLEKHH2Q8IVE3 1493 aa10.42□□□□□ -0.74
RAB28-207ENST00000511649 CAMSAP1Q5T5Y3 1602 aa10.41□□□□□ -0.74
RAB28-207ENST00000511649 ZNF454Q8N9F8 522 aa10.41□□□□□ -0.74
RAB28-207ENST00000511649 MYT1LQ9UL68 1186 aa10.41□□□□□ -0.74
RAB28-207ENST00000511649 CNTLNQ9NXG0 1405 aa10.41□□□□□ -0.74
RAB28-207ENST00000511649 ZMYM3Q14202 1370 aa10.4□□□□□ -0.74
RAB28-207ENST00000511649 CEP170BQ9Y4F5 1589 aaPredicted RBP10.4□□□□□ -0.74
RAB28-207ENST00000511649 LOC105371045A0A1W2PR82 267 aa10.4□□□□□ -0.74
RAB28-207ENST00000511649 PHF14O94880 888 aa10.4□□□□□ -0.74
RAB28-207ENST00000511649 PPP4R3BQ5MIZ7 849 aa10.4□□□□□ -0.74
RAB28-207ENST00000511649 CERKQ8TCT0 537 aa10.4□□□□□ -0.74
RAB28-207ENST00000511649 DDX12PQ92771 950 aa10.4□□□□□ -0.74
RAB28-207ENST00000511649 NPATQ14207 1427 aa10.4□□□□□ -0.75
RAB28-207ENST00000511649 ZNF687Q8N1G0 1237 aa10.39□□□□□ -0.75
RAB28-207ENST00000511649 PCDHGA10Q9Y5H3 936 aa10.39□□□□□ -0.75
RAB28-207ENST00000511649 MROH1Q8NDA8 1641 aa10.39□□□□□ -0.75
RAB28-207ENST00000511649 PTPRTO14522 1441 aa10.39□□□□□ -0.75
RAB28-207ENST00000511649 CCDC141Q6ZP82 1450 aa10.38□□□□□ -0.75
RAB28-207ENST00000511649 LRRC9Q6ZRR7 1453 aa10.38□□□□□ -0.75
RAB28-207ENST00000511649 SEMA3EO15041 775 aa10.38□□□□□ -0.75
RAB28-207ENST00000511649 VPS8Q8N3P4 1428 aa10.38□□□□□ -0.75
RAB28-207ENST00000511649 ARHGEF5Q12774 1597 aa10.38□□□□□ -0.75
RAB28-207ENST00000511649 NEURL4Q96JN8 1562 aa10.38□□□□□ -0.75
RAB28-207ENST00000511649 TCOF1Q13428 1488 aaKnown RBP10.37□□□□□ -0.75
RAB28-207ENST00000511649 RTEL1-TNFRSF6BF6WH68 1400 aa10.37□□□□□ -0.75
RAB28-207ENST00000511649 KANK4Q5T7N3 995 aaPredicted RBP10.37□□□□□ -0.75
RAB28-207ENST00000511649 DNMT1P26358 1616 aaKnown RBP10.36□□□□□ -0.75
RAB28-207ENST00000511649 GRXCR2A6NFK2 248 aa10.36□□□□□ -0.75
RAB28-207ENST00000511649 MLLT3P42568 568 aaPredicted RBP10.36□□□□□ -0.75
RAB28-207ENST00000511649 TYW1BQ6NUM6 668 aa10.36□□□□□ -0.75
RAB28-207ENST00000511649 ZDHHC16Q969W1 377 aa10.36□□□□□ -0.75
RAB28-207ENST00000511649 EPAS1Q99814 870 aa10.36□□□□□ -0.75
RAB28-207ENST00000511649 RNF17Q9BXT8 1623 aaKnown RBP10.36□□□□□ -0.75
RAB28-207ENST00000511649 NBR1Q14596 966 aa10.35□□□□□ -0.75
RAB28-207ENST00000511649 DHX29Q7Z478 1369 aaKnown RBP10.35□□□□□ -0.75
RAB28-207ENST00000511649 MAST1Q9Y2H9 1570 aa10.35□□□□□ -0.75
RAB28-207ENST00000511649 KDM5DQ9BY66 1539 aa10.34□□□□□ -0.75
RAB28-207ENST00000511649 FBXW7Q969H0 707 aa10.34□□□□□ -0.75
RAB28-207ENST00000511649 ADAM33Q9BZ11 813 aa10.34□□□□□ -0.75
RAB28-207ENST00000511649 PLA2R1Q13018 1463 aa10.34□□□□□ -0.75
RAB28-207ENST00000511649 TESPA1A2RU30 521 aaPredicted RBP10.33□□□□□ -0.76
RAB28-207ENST00000511649 FBXO31Q5XUX0 539 aaPredicted RBP10.33□□□□□ -0.76
RAB28-207ENST00000511649 GGT6Q6P531 493 aa10.33□□□□□ -0.76
RAB28-207ENST00000511649 POTEEQ6S8J3 1075 aa10.33□□□□□ -0.76
RAB28-207ENST00000511649 BCL2L12Q9HB09 334 aa10.33□□□□□ -0.76
RAB28-207ENST00000511649 PZPP20742 1482 aa10.33□□□□□ -0.76
RAB28-207ENST00000511649 ZNF335Q9H4Z2 1342 aaPredicted RBP10.33□□□□□ -0.76
RAB28-207ENST00000511649 CROCC2H7BZ55 1655 aa10.32□□□□□ -0.76
RAB28-207ENST00000511649 A2ML1A8K2U0 1454 aa10.32□□□□□ -0.76
RAB28-207ENST00000511649 CEP152O94986 1710 aa10.32□□□□□ -0.76
RAB28-207ENST00000511649 POLR1AO95602 1720 aaPredicted RBP10.32□□□□□ -0.76
RAB28-207ENST00000511649 ABCC3O15438 1527 aa10.32□□□□□ -0.76
RAB28-207ENST00000511649 OSBPP22059 807 aa10.31□□□□□ -0.76
RAB28-207ENST00000511649 PBX2P40425 430 aa10.31□□□□□ -0.76
RAB28-207ENST00000511649 EN1Q05925 392 aaPredicted RBP10.31□□□□□ -0.76
RAB28-207ENST00000511649 ALKQ9UM73 1620 aa10.31□□□□□ -0.76
RAB28-207ENST00000511649 MAP3K1Q13233 1512 aa10.31□□□□□ -0.76
RAB28-207ENST00000511649 STRCP1A6NGW2 1772 aa10.3□□□□□ -0.76
RAB28-207ENST00000511649 PRIM1P49642 420 aaKnown RBP10.3□□□□□ -0.76
RAB28-207ENST00000511649 AXIN2Q9Y2T1 843 aa10.3□□□□□ -0.76
RAB28-207ENST00000511649 MYOM3Q5VTT5 1437 aa10.3□□□□□ -0.76
RAB28-207ENST00000511649 FAM135AQ9P2D6 1515 aa10.29□□□□□ -0.76
RAB28-207ENST00000511649 EIF2AK4Q9P2K8 1649 aaKnown RBP10.29□□□□□ -0.76
RAB28-207ENST00000511649 SPATA31D1Q6ZQQ2 1576 aa10.28□□□□□ -0.76
RAB28-207ENST00000511649 VWDEQ8N2E2 1590 aa10.28□□□□□ -0.76
RAB28-207ENST00000511649 ARHGAP33O14559 1287 aa10.28□□□□□ -0.76
RAB28-207ENST00000511649 KIF3BO15066 747 aa10.28□□□□□ -0.76
RAB28-207ENST00000511649 PTPREP23469 700 aa10.28□□□□□ -0.76
RAB28-207ENST00000511649 RBM33Q96EV2 1170 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms