RNA–Protein interactions for RNA: ENST00000511298.1

CDS1-202, Transcript of CDP-diacylglycerol synthase 1, humanhuman

TSL 5

Gene CDS1, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-202ENST00000511298 ORAI2Q96SN7 254 aa31.51■■■□□ 2.63
CDS1-202ENST00000511298 POGKQ9P215 609 aa31.51■■■□□ 2.63
CDS1-202ENST00000511298 DISP3Q9P2K9 1392 aa31.5■■■□□ 2.63
CDS1-202ENST00000511298 CDC42BPGQ6DT37 1551 aa31.5■■■□□ 2.63
CDS1-202ENST00000511298 NBPF1Q3BBV0 1214 aa31.49■■■□□ 2.63
CDS1-202ENST00000511298 AHDC1Q5TGY3 1603 aaPredicted RBP31.49■■■□□ 2.63
CDS1-202ENST00000511298 SAFB2Q14151 953 aaKnown RBP eCLIP31.48■■■□□ 2.63
CDS1-202ENST00000511298 PCGF6Q9BYE7 350 aa31.48■■■□□ 2.63
CDS1-202ENST00000511298 JCADQ9P266 1359 aa31.45■■■□□ 2.63
CDS1-202ENST00000511298 DDX17Q92841 729 aaKnown RBP31.44■■■□□ 2.62
CDS1-202ENST00000511298 COL16A1Q07092 1604 aaPredicted RBP31.43■■■□□ 2.62
CDS1-202ENST00000511298 PHLPP1O60346 1717 aa31.43■■■□□ 2.62
CDS1-202ENST00000511298 ESCO1Q5FWF5 840 aa31.42■■■□□ 2.62
CDS1-202ENST00000511298 NUTM2FA1L443 756 aa31.41■■■□□ 2.62
CDS1-202ENST00000511298 MED1Q15648 1581 aaPredicted RBP31.4■■■□□ 2.62
CDS1-202ENST00000511298 KIAA1210Q9ULL0 1709 aa31.39■■■□□ 2.62
CDS1-202ENST00000511298 LRRC59Q96AG4 307 aaKnown RBP31.38■■■□□ 2.61
CDS1-202ENST00000511298 SOS2Q07890 1332 aaPredicted RBP31.37■■■□□ 2.61
CDS1-202ENST00000511298 MINK1Q8N4C8 1332 aaPredicted RBP31.36■■■□□ 2.61
CDS1-202ENST00000511298 NBPF8Q3BBV2 869 aa31.36■■■□□ 2.61
CDS1-202ENST00000511298 HIRIP3Q9BW71 556 aaPredicted RBP31.35■■■□□ 2.61
CDS1-202ENST00000511298 TONSLQ96HA7 1378 aa31.33■■■□□ 2.61
CDS1-202ENST00000511298 SPATA31A6Q5VVP1 1343 aa31.33■■■□□ 2.61
CDS1-202ENST00000511298 NHSL1Q5SYE7 1610 aa31.33■■■□□ 2.61
CDS1-202ENST00000511298 WASLO00401 505 aaPredicted RBP31.32■■■□□ 2.6
CDS1-202ENST00000511298 FOXO3O43524 673 aa31.32■■■□□ 2.6
CDS1-202ENST00000511298 NPHP3Q7Z494 1330 aa31.31■■■□□ 2.6
CDS1-202ENST00000511298 ADGRB2O60241 1585 aa31.3■■■□□ 2.6
CDS1-202ENST00000511298 FMN2Q9NZ56 1722 aa31.29■■■□□ 2.6
CDS1-202ENST00000511298 ANKARQ7Z5J8 1434 aa31.28■■■□□ 2.6
CDS1-202ENST00000511298 PHF8Q9UPP1 1060 aa31.27■■■□□ 2.6
CDS1-202ENST00000511298 ILDR2Q71H61 639 aa31.25■■■□□ 2.59
CDS1-202ENST00000511298 PHF23Q9BUL5 403 aaPredicted RBP31.25■■■□□ 2.59
CDS1-202ENST00000511298 PNPLA6Q8IY17 1366 aa31.25■■■□□ 2.59
CDS1-202ENST00000511298 PRR36Q9H6K5 1346 aa31.24■■■□□ 2.59
CDS1-202ENST00000511298 ARHGEF28Q8N1W1 1705 aaKnown RBP31.24■■■□□ 2.59
CDS1-202ENST00000511298 ROCK2O75116 1388 aaKnown RBP31.24■■■□□ 2.59
CDS1-202ENST00000511298 CLSPNQ9HAW4 1339 aa31.24■■■□□ 2.59
CDS1-202ENST00000511298 CENPJQ9HC77 1338 aaPredicted RBP31.24■■■□□ 2.59
CDS1-202ENST00000511298 EIF3AQ14152 1382 aaKnown RBP31.23■■■□□ 2.59
CDS1-202ENST00000511298 GPRASP1Q5JY77 1395 aa31.23■■■□□ 2.59
CDS1-202ENST00000511298 RGS17Q9UGC6 210 aaPredicted RBP31.23■■■□□ 2.59
CDS1-202ENST00000511298 PXDNQ92626 1479 aa31.21■■■□□ 2.59
CDS1-202ENST00000511298 TRPM1Q7Z4N2 1603 aa31.21■■■□□ 2.59
CDS1-202ENST00000511298 XPCQ01831 940 aaPredicted RBP31.21■■■□□ 2.59
CDS1-202ENST00000511298 CDK19Q9BWU1 502 aa31.21■■■□□ 2.59
CDS1-202ENST00000511298 SHPRHQ149N8 1683 aa31.2■■■□□ 2.59
CDS1-202ENST00000511298 KRT28Q7Z3Y7 464 aa31.19■■■□□ 2.58
CDS1-202ENST00000511298 LRP6O75581 1613 aa31.19■■■□□ 2.58
CDS1-202ENST00000511298 TULP4Q9NRJ4 1543 aa31.19■■■□□ 2.58
CDS1-202ENST00000511298 PMFBP1Q8TBY8 1022 aa31.17■■■□□ 2.58
CDS1-202ENST00000511298 NUDT16Q96DE0 195 aaKnown RBP31.17■■■□□ 2.58
CDS1-202ENST00000511298 NUTM2BA6NNL0 878 aaPredicted RBP31.16■■■□□ 2.58
CDS1-202ENST00000511298 NUTM2EB1AL46 878 aaPredicted RBP31.16■■■□□ 2.58
CDS1-202ENST00000511298 NUTM2AQ8IVF1 878 aaPredicted RBP31.16■■■□□ 2.58
CDS1-202ENST00000511298 USP32Q8NFA0 1604 aa31.16■■■□□ 2.58
CDS1-202ENST00000511298 TIMELESSQ9UNS1 1208 aa31.14■■■□□ 2.58
CDS1-202ENST00000511298 KIF1AQ12756 1690 aa31.13■■■□□ 2.57
CDS1-202ENST00000511298 PSME1Q06323 249 aa31.13■■■□□ 2.57
CDS1-202ENST00000511298 SPATA31A3Q5VYP0 1347 aa31.13■■■□□ 2.57
CDS1-202ENST00000511298 CARD11Q9BXL7 1154 aa31.12■■■□□ 2.57
CDS1-202ENST00000511298 RALGAPBQ86X10 1494 aa31.11■■■□□ 2.57
CDS1-202ENST00000511298 MEX3CQ5U5Q3 659 aaKnown RBP31.1■■■□□ 2.57
CDS1-202ENST00000511298 CCDC61Q9Y6R9 512 aa31.1■■■□□ 2.57
CDS1-202ENST00000511298 ATP7BP35670 1465 aa31.09■■■□□ 2.57
CDS1-202ENST00000511298 SBNO1A3KN83 1393 aa31.08■■■□□ 2.57
CDS1-202ENST00000511298 RGPD8O14715 1765 aaPredicted RBP31.07■■■□□ 2.56
CDS1-202ENST00000511298 PLEKHG3A1L390 1219 aa31.06■■■□□ 2.56
CDS1-202ENST00000511298 POTEAQ6S8J7 498 aa31.06■■■□□ 2.56
CDS1-202ENST00000511298 SRPK2P78362 688 aaKnown RBP31.05■■■□□ 2.56
CDS1-202ENST00000511298 NGDNQ8NEJ9 315 aaKnown RBP31.05■■■□□ 2.56
CDS1-202ENST00000511298 CCER1Q8TC90 406 aaPredicted RBP31.04■■■□□ 2.56
CDS1-202ENST00000511298 CABP2Q9NPB3 220 aa31.04■■■□□ 2.56
CDS1-202ENST00000511298 EVC2Q86UK5 1308 aa31.01■■■□□ 2.56
CDS1-202ENST00000511298 TNS3Q68CZ2 1445 aa31.01■■■□□ 2.55
CDS1-202ENST00000511298 COL22A1Q8NFW1 1626 aaPredicted RBP31.01■■■□□ 2.55
CDS1-202ENST00000511298 ADAMTS2O95450 1211 aa31■■■□□ 2.55
CDS1-202ENST00000511298 ZNF772Q68DY9 489 aaPredicted RBP30.99■■■□□ 2.55
CDS1-202ENST00000511298 POLR3AO14802 1390 aaPredicted RBP30.99■■■□□ 2.55
CDS1-202ENST00000511298 SBNO2Q9Y2G9 1366 aa30.98■■■□□ 2.55
CDS1-202ENST00000511298 ACEP12821 1306 aa30.98■■■□□ 2.55
CDS1-202ENST00000511298 C8orf37Q96NL8 207 aa30.97■■■□□ 2.55
CDS1-202ENST00000511298 QRICH2Q9H0J4 1663 aa30.97■■■□□ 2.55
CDS1-202ENST00000511298 ARHGEF10O15013 1369 aa30.96■■■□□ 2.55
CDS1-202ENST00000511298 AFF2P51816 1311 aa30.96■■■□□ 2.55
CDS1-202ENST00000511298 LMOD2Q6P5Q4 547 aa30.93■■■□□ 2.54
CDS1-202ENST00000511298 NGLY1Q96IV0 654 aa30.93■■■□□ 2.54
CDS1-202ENST00000511298 CABP1Q9NZU7 370 aa30.93■■■□□ 2.54
CDS1-202ENST00000511298 PPIP5K1Q6PFW1 1433 aa30.92■■■□□ 2.54
CDS1-202ENST00000511298 FNBP4Q8N3X1 1017 aaPredicted RBP30.91■■■□□ 2.54
CDS1-202ENST00000511298 CABLES1Q8TDN4 633 aa30.91■■■□□ 2.54
CDS1-202ENST00000511298 SOCS7O14512 581 aa30.9■■■□□ 2.54
CDS1-202ENST00000511298 TOPAZ1Q8N9V7 1692 aa30.89■■■□□ 2.54
CDS1-202ENST00000511298 ST20-MTHFSA0A0A6YYL1 179 aa30.88■■■□□ 2.53
CDS1-202ENST00000511298 PAK3O75914 559 aaPredicted RBP30.88■■■□□ 2.53
CDS1-202ENST00000511298 TESK2Q96S53 571 aa30.88■■■□□ 2.53
CDS1-202ENST00000511298 ITSN1Q15811 1721 aa30.87■■■□□ 2.53
CDS1-202ENST00000511298 TRPM3Q9HCF6 1732 aaPredicted RBP30.87■■■□□ 2.53
CDS1-202ENST00000511298 ATAD2Q6PL18 1390 aa30.84■■■□□ 2.53
CDS1-202ENST00000511298 PUS7Q96PZ0 661 aaKnown RBP30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms