RNA–Protein interactions for RNA: ENST00000511249.5

MATR3-216, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-216ENST00000511249 CYP4X1Q8N118 509 aa8.75□□□□□ -1.01
MATR3-216ENST00000511249 IL27Q8NEV9 243 aa8.75□□□□□ -1.01
MATR3-216ENST00000511249 SPSB2Q99619 263 aa8.75□□□□□ -1.01
MATR3-216ENST00000511249 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.74□□□□□ -1.01
MATR3-216ENST00000511249 KDM4CQ9H3R0 1056 aa8.72□□□□□ -1.01
MATR3-216ENST00000511249 RSPH4AQ5TD94 716 aa8.71□□□□□ -1.02
MATR3-216ENST00000511249 HRCP23327 699 aa8.7□□□□□ -1.02
MATR3-216ENST00000511249 MLLT3P42568 568 aaPredicted RBP8.7□□□□□ -1.02
MATR3-216ENST00000511249 PUS10Q3MIT2 529 aaKnown RBP8.7□□□□□ -1.02
MATR3-216ENST00000511249 FCF1Q9Y324 198 aaKnown RBP8.7□□□□□ -1.02
MATR3-216ENST00000511249 FAM161AQ3B820 660 aa8.69□□□□□ -1.02
MATR3-216ENST00000511249 RBM26Q5T8P6 1007 aaKnown RBP8.69□□□□□ -1.02
MATR3-216ENST00000511249 GPIHBP1Q8IV16 184 aa8.68□□□□□ -1.02
MATR3-216ENST00000511249 KRI1Q8N9T8 703 aaKnown RBP8.68□□□□□ -1.02
MATR3-216ENST00000511249 ARID3AQ99856 593 aa8.68□□□□□ -1.02
MATR3-216ENST00000511249 TTC24A2A3L6 582 aaPredicted RBP8.67□□□□□ -1.02
MATR3-216ENST00000511249 TERTO14746 1132 aaKnown RBP8.67□□□□□ -1.02
MATR3-216ENST00000511249 C1orf115Q9H7X2 142 aa8.67□□□□□ -1.02
MATR3-216ENST00000511249 TRIM66O15016 1216 aa8.66□□□□□ -1.02
MATR3-216ENST00000511249 PXYLP1Q8TE99 480 aa8.66□□□□□ -1.02
MATR3-216ENST00000511249 ATP13A2Q9NQ11 1180 aa8.66□□□□□ -1.02
MATR3-216ENST00000511249 OATP04181 439 aa8.65□□□□□ -1.02
MATR3-216ENST00000511249 PDE4DQ08499 809 aa8.65□□□□□ -1.02
MATR3-216ENST00000511249 LCE2CQ5TA81 110 aa8.65□□□□□ -1.02
MATR3-216ENST00000511249 THAP11Q96EK4 314 aa8.65□□□□□ -1.02
MATR3-216ENST00000511249 SENP2Q9HC62 589 aa8.65□□□□□ -1.02
MATR3-216ENST00000511249 NUTM2FA1L443 756 aa8.64□□□□□ -1.03
MATR3-216ENST00000511249 MORN1Q5T089 497 aa8.64□□□□□ -1.03
MATR3-216ENST00000511249 TRIM47Q96LD4 638 aa8.64□□□□□ -1.03
MATR3-216ENST00000511249 WNT7AO00755 349 aa8.63□□□□□ -1.03
MATR3-216ENST00000511249 ZBTB24O43167 697 aaPredicted RBP8.63□□□□□ -1.03
MATR3-216ENST00000511249 FCHSD2O94868 740 aa8.63□□□□□ -1.03
MATR3-216ENST00000511249 FMNL1O95466 1100 aaPredicted RBP8.63□□□□□ -1.03
MATR3-216ENST00000511249 SNRPBP14678 240 aaKnown RBP8.63□□□□□ -1.03
MATR3-216ENST00000511249 SMPD1P17405 629 aa8.63□□□□□ -1.03
MATR3-216ENST00000511249 FAM160A2Q8N612 972 aaPredicted RBP8.63□□□□□ -1.03
MATR3-216ENST00000511249 SNIP1Q8TAD8 396 aaKnown RBP8.63□□□□□ -1.03
MATR3-216ENST00000511249 NPM2Q86SE8 214 aaKnown RBP8.62□□□□□ -1.03
MATR3-216ENST00000511249 FAM181BA6NEQ2 426 aa8.61□□□□□ -1.03
MATR3-216ENST00000511249 SALL2Q9Y467 1007 aaPredicted RBP8.61□□□□□ -1.03
MATR3-216ENST00000511249 ATP6V1AP38606 617 aa8.6□□□□□ -1.03
MATR3-216ENST00000511249 KIFC2Q96AC6 838 aa8.6□□□□□ -1.03
MATR3-216ENST00000511249 METTL3Q86U44 580 aaKnown RBP8.59□□□□□ -1.03
MATR3-216ENST00000511249 FAM117AQ9C073 453 aa8.59□□□□□ -1.03
MATR3-216ENST00000511249 ARID3CA6NKF2 412 aa8.58□□□□□ -1.04
MATR3-216ENST00000511249 FUT2Q10981 343 aa8.58□□□□□ -1.04
MATR3-216ENST00000511249 MSS51Q4VC12 460 aa8.58□□□□□ -1.04
MATR3-216ENST00000511249 RDH13Q8NBN7 331 aa8.58□□□□□ -1.04
MATR3-216ENST00000511249 SLC27A5Q9Y2P5 690 aa8.58□□□□□ -1.04
MATR3-216ENST00000511249 LOC100996750A0A140TA64 210 aa8.57□□□□□ -1.04
MATR3-216ENST00000511249 BRICD5Q6PL45 260 aa8.57□□□□□ -1.04
MATR3-216ENST00000511249 KRTAP4-6Q9BYQ5 205 aa8.57□□□□□ -1.04
MATR3-216ENST00000511249 PRDM9Q9NQV7 894 aa8.57□□□□□ -1.04
MATR3-216ENST00000511249 APBB1O00213 710 aa8.56□□□□□ -1.04
MATR3-216ENST00000511249 SLC16A10Q8TF71 515 aa8.56□□□□□ -1.04
MATR3-216ENST00000511249 PLEKHG3A1L390 1219 aa8.55□□□□□ -1.04
MATR3-216ENST00000511249 J3QL48 77 aa8.55□□□□□ -1.04
MATR3-216ENST00000511249 TRIM32Q13049 653 aa8.55□□□□□ -1.04
MATR3-216ENST00000511249 MRGPRX2Q96LB1 330 aa8.55□□□□□ -1.04
MATR3-216ENST00000511249 GPR37O15354 613 aa8.54□□□□□ -1.04
MATR3-216ENST00000511249 REPIN1Q9BWE0 567 aaKnown RBP8.54□□□□□ -1.04
MATR3-216ENST00000511249 FLIIQ13045 1269 aa8.53□□□□□ -1.04
MATR3-216ENST00000511249 HIC1Q14526 733 aa8.53□□□□□ -1.04
MATR3-216ENST00000511249 FECHP22830 423 aa8.52□□□□□ -1.05
MATR3-216ENST00000511249 GCGRP47871 477 aa8.52□□□□□ -1.05
MATR3-216ENST00000511249 HPS1Q92902 700 aa8.52□□□□□ -1.05
MATR3-216ENST00000511249 DDRGK1Q96HY6 314 aa8.52□□□□□ -1.05
MATR3-216ENST00000511249 DDX11L8A8MPP1 907 aa8.51□□□□□ -1.05
MATR3-216ENST00000511249 ZSCAN1Q8NBB4 408 aa8.51□□□□□ -1.05
MATR3-216ENST00000511249 NXF1Q9UBU9 619 aaKnown RBP8.51□□□□□ -1.05
MATR3-216ENST00000511249 MMP16P51512 607 aa8.5□□□□□ -1.05
MATR3-216ENST00000511249 RNF19BQ6ZMZ0 732 aa8.5□□□□□ -1.05
MATR3-216ENST00000511249 SULF1Q8IWU6 871 aa8.5□□□□□ -1.05
MATR3-216ENST00000511249 NPAS3Q8IXF0 933 aa8.5□□□□□ -1.05
MATR3-216ENST00000511249 PDIA4P13667 645 aaKnown RBP8.49□□□□□ -1.05
MATR3-216ENST00000511249 LORP23490 312 aaPredicted RBP8.49□□□□□ -1.05
MATR3-216ENST00000511249 GMPRP36959 345 aa8.49□□□□□ -1.05
MATR3-216ENST00000511249 GRIPAP1Q4V328 841 aa8.49□□□□□ -1.05
MATR3-216ENST00000511249 IRF7Q92985 503 aa8.49□□□□□ -1.05
MATR3-216ENST00000511249 Q3C1V9 767 aa8.48□□□□□ -1.05
MATR3-216ENST00000511249 MINK1Q8N4C8 1332 aaPredicted RBP8.48□□□□□ -1.05
MATR3-216ENST00000511249 ZBTB7CA1YPR0 619 aa8.47□□□□□ -1.05
MATR3-216ENST00000511249 CCDC102AQ96A19 550 aa8.47□□□□□ -1.05
MATR3-216ENST00000511249 WNT7BP56706 349 aa8.46□□□□□ -1.06
MATR3-216ENST00000511249 AMHR2Q16671 573 aa8.46□□□□□ -1.06
MATR3-216ENST00000511249 PARP9Q8IXQ6 854 aa8.46□□□□□ -1.06
MATR3-216ENST00000511249 MAP2K5Q13163 448 aa8.45□□□□□ -1.06
MATR3-216ENST00000511249 RC3H1Q5TC82 1133 aaKnown RBP8.45□□□□□ -1.06
MATR3-216ENST00000511249 CCDC82Q8N4S0 544 aa8.45□□□□□ -1.06
MATR3-216ENST00000511249 A6NJR5 290 aa8.44□□□□□ -1.06
MATR3-216ENST00000511249 GNPATO15228 680 aa8.44□□□□□ -1.06
MATR3-216ENST00000511249 DXOO77932 396 aaKnown RBP8.44□□□□□ -1.06
MATR3-216ENST00000511249 CCDC9Q9Y3X0 531 aaKnown RBP8.44□□□□□ -1.06
MATR3-216ENST00000511249 IRF6O14896 467 aa8.43□□□□□ -1.06
MATR3-216ENST00000511249 TRAK2O60296 914 aa8.43□□□□□ -1.06
MATR3-216ENST00000511249 CLUAP1Q96AJ1 413 aa8.43□□□□□ -1.06
MATR3-216ENST00000511249 GOPCQ9HD26 462 aa8.43□□□□□ -1.06
MATR3-216ENST00000511249 H3BM21 787 aa8.42□□□□□ -1.06
MATR3-216ENST00000511249 SKOR1P84550 965 aa8.42□□□□□ -1.06
MATR3-216ENST00000511249 USB1Q9BQ65 265 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms