RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 JCADQ9P266 1359 aa21.2■□□□□ 0.98
COL12A1-210ENST00000511023 DDX17Q92841 729 aaKnown RBP21.19■□□□□ 0.98
COL12A1-210ENST00000511023 STAC3Q96MF2 364 aa21.19■□□□□ 0.98
COL12A1-210ENST00000511023 ORAI2Q96SN7 254 aa21.18■□□□□ 0.98
COL12A1-210ENST00000511023 DLC1Q96QB1 1528 aa21.16■□□□□ 0.98
COL12A1-210ENST00000511023 TRIM26Q12899 539 aaPredicted RBP21.16■□□□□ 0.98
COL12A1-210ENST00000511023 PRAM1Q96QH2 718 aa21.15■□□□□ 0.98
COL12A1-210ENST00000511023 SIN3AQ96ST3 1273 aa21.14■□□□□ 0.97
COL12A1-210ENST00000511023 PHF23Q9BUL5 403 aaPredicted RBP21.14■□□□□ 0.97
COL12A1-210ENST00000511023 SHPRHQ149N8 1683 aa21.14■□□□□ 0.97
COL12A1-210ENST00000511023 RGS17Q9UGC6 210 aaPredicted RBP21.13■□□□□ 0.97
COL12A1-210ENST00000511023 TRAK1Q9UPV9 953 aa21.13■□□□□ 0.97
COL12A1-210ENST00000511023 FMN2Q9NZ56 1722 aa21.12■□□□□ 0.97
COL12A1-210ENST00000511023 SAFB2Q14151 953 aaKnown RBP eCLIP21.12■□□□□ 0.97
COL12A1-210ENST00000511023 LRP6O75581 1613 aa21.11■□□□□ 0.97
COL12A1-210ENST00000511023 NUTM2FA1L443 756 aa21.11■□□□□ 0.97
COL12A1-210ENST00000511023 SPATA31A6Q5VVP1 1343 aa21.09■□□□□ 0.97
COL12A1-210ENST00000511023 ESCO1Q5FWF5 840 aa21.09■□□□□ 0.97
COL12A1-210ENST00000511023 SOS2Q07890 1332 aaPredicted RBP21.08■□□□□ 0.97
COL12A1-210ENST00000511023 L3MBTL2Q969R5 705 aa21.08■□□□□ 0.97
COL12A1-210ENST00000511023 LRRC59Q96AG4 307 aaKnown RBP21.08■□□□□ 0.97
COL12A1-210ENST00000511023 POGKQ9P215 609 aa21.08■□□□□ 0.97
COL12A1-210ENST00000511023 KIAA1210Q9ULL0 1709 aa21.07■□□□□ 0.96
COL12A1-210ENST00000511023 NEUROD1Q13562 356 aa21.06■□□□□ 0.96
COL12A1-210ENST00000511023 PNPLA6Q8IY17 1366 aa21.06■□□□□ 0.96
COL12A1-210ENST00000511023 ADGRB2O60241 1585 aa21.06■□□□□ 0.96
COL12A1-210ENST00000511023 ARHGEF28Q8N1W1 1705 aaKnown RBP21.05■□□□□ 0.96
COL12A1-210ENST00000511023 NBPF1Q3BBV0 1214 aa21.05■□□□□ 0.96
COL12A1-210ENST00000511023 PXDNQ92626 1479 aa21.04■□□□□ 0.96
COL12A1-210ENST00000511023 RGPD8O14715 1765 aaPredicted RBP21.03■□□□□ 0.96
COL12A1-210ENST00000511023 FOXO3O43524 673 aa21.03■□□□□ 0.96
COL12A1-210ENST00000511023 HIRIP3Q9BW71 556 aaPredicted RBP21.03■□□□□ 0.96
COL12A1-210ENST00000511023 MINK1Q8N4C8 1332 aaPredicted RBP21.03■□□□□ 0.96
COL12A1-210ENST00000511023 USP32Q8NFA0 1604 aa21.02■□□□□ 0.96
COL12A1-210ENST00000511023 NPHP3Q7Z494 1330 aa21.02■□□□□ 0.95
COL12A1-210ENST00000511023 NUTM2BA6NNL0 878 aaPredicted RBP21.01■□□□□ 0.95
COL12A1-210ENST00000511023 NUTM2EB1AL46 878 aaPredicted RBP21.01■□□□□ 0.95
COL12A1-210ENST00000511023 SOCS7O14512 581 aa21.01■□□□□ 0.95
COL12A1-210ENST00000511023 XPCQ01831 940 aaPredicted RBP21.01■□□□□ 0.95
COL12A1-210ENST00000511023 POTEAQ6S8J7 498 aa21.01■□□□□ 0.95
COL12A1-210ENST00000511023 NUTM2AQ8IVF1 878 aaPredicted RBP21.01■□□□□ 0.95
COL12A1-210ENST00000511023 KIF1AQ12756 1690 aa20.99■□□□□ 0.95
COL12A1-210ENST00000511023 ANKARQ7Z5J8 1434 aa20.97■□□□□ 0.95
COL12A1-210ENST00000511023 MEX3CQ5U5Q3 659 aaKnown RBP20.97■□□□□ 0.95
COL12A1-210ENST00000511023 PHF8Q9UPP1 1060 aa20.97■□□□□ 0.95
COL12A1-210ENST00000511023 PRR36Q9H6K5 1346 aa20.97■□□□□ 0.95
COL12A1-210ENST00000511023 WASLO00401 505 aaPredicted RBP20.96■□□□□ 0.95
COL12A1-210ENST00000511023 TRPM1Q7Z4N2 1603 aa20.95■□□□□ 0.94
COL12A1-210ENST00000511023 COL22A1Q8NFW1 1626 aaPredicted RBP20.95■□□□□ 0.94
COL12A1-210ENST00000511023 TULP4Q9NRJ4 1543 aa20.94■□□□□ 0.94
COL12A1-210ENST00000511023 KRT28Q7Z3Y7 464 aa20.93■□□□□ 0.94
COL12A1-210ENST00000511023 NBPF8Q3BBV2 869 aa20.92■□□□□ 0.94
COL12A1-210ENST00000511023 PMFBP1Q8TBY8 1022 aa20.92■□□□□ 0.94
COL12A1-210ENST00000511023 EIF3AQ14152 1382 aaKnown RBP20.91■□□□□ 0.94
COL12A1-210ENST00000511023 SPATA31A3Q5VYP0 1347 aa20.91■□□□□ 0.94
COL12A1-210ENST00000511023 ADAMTS2O95450 1211 aa20.9■□□□□ 0.94
COL12A1-210ENST00000511023 ATP7BP35670 1465 aa20.89■□□□□ 0.94
COL12A1-210ENST00000511023 AFF2P51816 1311 aa20.89■□□□□ 0.93
COL12A1-210ENST00000511023 C8orf37Q96NL8 207 aa20.89■□□□□ 0.93
COL12A1-210ENST00000511023 CDK19Q9BWU1 502 aa20.88■□□□□ 0.93
COL12A1-210ENST00000511023 CENPJQ9HC77 1338 aaPredicted RBP20.87■□□□□ 0.93
COL12A1-210ENST00000511023 ZNF772Q68DY9 489 aaPredicted RBP20.87■□□□□ 0.93
COL12A1-210ENST00000511023 NUDT16Q96DE0 195 aaKnown RBP20.87■□□□□ 0.93
COL12A1-210ENST00000511023 TNS3Q68CZ2 1445 aa20.87■□□□□ 0.93
COL12A1-210ENST00000511023 PSME1Q06323 249 aa20.86■□□□□ 0.93
COL12A1-210ENST00000511023 SBNO1A3KN83 1393 aa20.85■□□□□ 0.93
COL12A1-210ENST00000511023 ROCK2O75116 1388 aaKnown RBP20.85■□□□□ 0.93
COL12A1-210ENST00000511023 TONSLQ96HA7 1378 aa20.85■□□□□ 0.93
COL12A1-210ENST00000511023 QRICH2Q9H0J4 1663 aa20.85■□□□□ 0.93
COL12A1-210ENST00000511023 TRPM3Q9HCF6 1732 aaPredicted RBP20.84■□□□□ 0.93
COL12A1-210ENST00000511023 GPRASP1Q5JY77 1395 aa20.84■□□□□ 0.93
COL12A1-210ENST00000511023 ITSN1Q15811 1721 aa20.83■□□□□ 0.92
COL12A1-210ENST00000511023 TOPAZ1Q8N9V7 1692 aa20.83■□□□□ 0.92
COL12A1-210ENST00000511023 NGLY1Q96IV0 654 aa20.82■□□□□ 0.92
COL12A1-210ENST00000511023 PCGF6Q9BYE7 350 aa20.81■□□□□ 0.92
COL12A1-210ENST00000511023 NGDNQ8NEJ9 315 aaKnown RBP20.8■□□□□ 0.92
COL12A1-210ENST00000511023 MARF1Q9Y4F3 1742 aaKnown RBP20.8■□□□□ 0.92
COL12A1-210ENST00000511023 FNBP4Q8N3X1 1017 aaPredicted RBP20.79■□□□□ 0.92
COL12A1-210ENST00000511023 CABLES1Q8TDN4 633 aa20.79■□□□□ 0.92
COL12A1-210ENST00000511023 CCDC61Q9Y6R9 512 aa20.79■□□□□ 0.92
COL12A1-210ENST00000511023 RALGAPBQ86X10 1494 aa20.79■□□□□ 0.92
COL12A1-210ENST00000511023 ALS2Q96Q42 1657 aa20.79■□□□□ 0.92
COL12A1-210ENST00000511023 ARHGEF10O15013 1369 aa20.78■□□□□ 0.92
COL12A1-210ENST00000511023 LMOD2Q6P5Q4 547 aa20.78■□□□□ 0.92
COL12A1-210ENST00000511023 CABP2Q9NPB3 220 aa20.78■□□□□ 0.92
COL12A1-210ENST00000511023 POLR3AO14802 1390 aaPredicted RBP20.77■□□□□ 0.92
COL12A1-210ENST00000511023 PLEKHG3A1L390 1219 aa20.77■□□□□ 0.92
COL12A1-210ENST00000511023 SRPK2P78362 688 aaKnown RBP20.77■□□□□ 0.92
COL12A1-210ENST00000511023 QTRT2Q9H974 415 aaKnown RBP20.77■□□□□ 0.92
COL12A1-210ENST00000511023 ABCA3Q99758 1704 aa20.77■□□□□ 0.92
COL12A1-210ENST00000511023 PLEKHG5O94827 1062 aa20.76■□□□□ 0.91
COL12A1-210ENST00000511023 RXRBP28702 533 aa20.76■□□□□ 0.91
COL12A1-210ENST00000511023 USP21Q9UK80 565 aa20.76■□□□□ 0.91
COL12A1-210ENST00000511023 ACEP12821 1306 aa20.76■□□□□ 0.91
COL12A1-210ENST00000511023 BCL9LQ86UU0 1499 aa20.75■□□□□ 0.91
COL12A1-210ENST00000511023 CARD11Q9BXL7 1154 aa20.74■□□□□ 0.91
COL12A1-210ENST00000511023 PPIP5K1Q6PFW1 1433 aa20.73■□□□□ 0.91
COL12A1-210ENST00000511023 ATRNO75882 1429 aa20.72■□□□□ 0.91
COL12A1-210ENST00000511023 PAK3O75914 559 aaPredicted RBP20.72■□□□□ 0.91
COL12A1-210ENST00000511023 CDK12Q9NYV4 1490 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms