RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 MINK1Q8N4C8 1332 aaPredicted RBP20.62■□□□□ 0.89
SNCAIP-211ENST00000509023 DDX10Q13206 875 aaKnown RBP20.61■□□□□ 0.89
SNCAIP-211ENST00000509023 TULP4Q9NRJ4 1543 aa20.6■□□□□ 0.89
SNCAIP-211ENST00000509023 NWD1Q149M9 1564 aa20.6■□□□□ 0.89
SNCAIP-211ENST00000509023 CDCA8Q53HL2 280 aa20.6■□□□□ 0.89
SNCAIP-211ENST00000509023 EVC2Q86UK5 1308 aa20.59■□□□□ 0.89
SNCAIP-211ENST00000509023 DIEXFQ68CQ4 756 aaKnown RBP20.57■□□□□ 0.88
SNCAIP-211ENST00000509023 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.57■□□□□ 0.88
SNCAIP-211ENST00000509023 AEBP2Q6ZN18 517 aaPredicted RBP20.54■□□□□ 0.88
SNCAIP-211ENST00000509023 DMRT2Q9Y5R5 561 aa20.54■□□□□ 0.88
SNCAIP-211ENST00000509023 ADGRB2O60241 1585 aa20.53■□□□□ 0.88
SNCAIP-211ENST00000509023 NKTRP30414 1462 aaKnown RBP20.53■□□□□ 0.88
SNCAIP-211ENST00000509023 STRCP1A6NGW2 1772 aa20.53■□□□□ 0.88
SNCAIP-211ENST00000509023 SRPK2P78362 688 aaKnown RBP20.52■□□□□ 0.88
SNCAIP-211ENST00000509023 CABP2Q9NPB3 220 aa20.52■□□□□ 0.88
SNCAIP-211ENST00000509023 CDK19Q9BWU1 502 aa20.52■□□□□ 0.87
SNCAIP-211ENST00000509023 MYOM1P52179 1685 aa20.51■□□□□ 0.87
SNCAIP-211ENST00000509023 WASLO00401 505 aaPredicted RBP20.5■□□□□ 0.87
SNCAIP-211ENST00000509023 RBM33Q96EV2 1170 aaKnown RBP20.5■□□□□ 0.87
SNCAIP-211ENST00000509023 PUS7Q96PZ0 661 aaKnown RBP20.5■□□□□ 0.87
SNCAIP-211ENST00000509023 NALCNQ8IZF0 1738 aa20.48■□□□□ 0.87
SNCAIP-211ENST00000509023 PROSER2Q86WR7 435 aaPredicted RBP20.48■□□□□ 0.87
SNCAIP-211ENST00000509023 ATAD2Q6PL18 1390 aa20.47■□□□□ 0.87
SNCAIP-211ENST00000509023 ZNF335Q9H4Z2 1342 aaPredicted RBP20.47■□□□□ 0.87
SNCAIP-211ENST00000509023 ADGRL3Q9HAR2 1447 aa20.45■□□□□ 0.86
SNCAIP-211ENST00000509023 TMC1Q8TDI8 760 aa20.45■□□□□ 0.86
SNCAIP-211ENST00000509023 C14orf37Q86TY3 774 aa20.44■□□□□ 0.86
SNCAIP-211ENST00000509023 PANK3Q9H999 370 aa20.43■□□□□ 0.86
SNCAIP-211ENST00000509023 CDC42BPGQ6DT37 1551 aa20.43■□□□□ 0.86
SNCAIP-211ENST00000509023 SLC12A5Q9H2X9 1139 aa20.43■□□□□ 0.86
SNCAIP-211ENST00000509023 TMEM94Q12767 1356 aa20.42■□□□□ 0.86
SNCAIP-211ENST00000509023 ATP7BP35670 1465 aa20.42■□□□□ 0.86
SNCAIP-211ENST00000509023 NINLQ9Y2I6 1382 aa20.41■□□□□ 0.86
SNCAIP-211ENST00000509023 NUDT16Q96DE0 195 aaKnown RBP20.41■□□□□ 0.86
SNCAIP-211ENST00000509023 PRR36Q9H6K5 1346 aa20.4■□□□□ 0.86
SNCAIP-211ENST00000509023 NUTM2FA1L443 756 aa20.4■□□□□ 0.86
SNCAIP-211ENST00000509023 FMN2Q9NZ56 1722 aa20.4■□□□□ 0.86
SNCAIP-211ENST00000509023 NCOA3Q9Y6Q9 1424 aa20.4■□□□□ 0.86
SNCAIP-211ENST00000509023 LRRC7Q96NW7 1537 aa20.39■□□□□ 0.85
SNCAIP-211ENST00000509023 USP32Q8NFA0 1604 aa20.38■□□□□ 0.85
SNCAIP-211ENST00000509023 PPIP5K1Q6PFW1 1433 aa20.38■□□□□ 0.85
SNCAIP-211ENST00000509023 CABP1Q9NZU7 370 aa20.37■□□□□ 0.85
SNCAIP-211ENST00000509023 CCDC61Q9Y6R9 512 aa20.37■□□□□ 0.85
SNCAIP-211ENST00000509023 TOPAZ1Q8N9V7 1692 aa20.37■□□□□ 0.85
SNCAIP-211ENST00000509023 XIRP1Q702N8 1843 aaKnown RBP20.37■□□□□ 0.85
SNCAIP-211ENST00000509023 C19orf44Q9H6X5 657 aa20.36■□□□□ 0.85
SNCAIP-211ENST00000509023 ANKRD36BQ8N2N9 1353 aa20.36■□□□□ 0.85
SNCAIP-211ENST00000509023 ANKARQ7Z5J8 1434 aa20.36■□□□□ 0.85
SNCAIP-211ENST00000509023 PER1O15534 1290 aaPredicted RBP20.35■□□□□ 0.85
SNCAIP-211ENST00000509023 CD163L1Q9NR16 1453 aa20.35■□□□□ 0.85
SNCAIP-211ENST00000509023 ITSN1Q15811 1721 aa20.34■□□□□ 0.85
SNCAIP-211ENST00000509023 A0A1W2PP64 1363 aa20.34■□□□□ 0.85
SNCAIP-211ENST00000509023 RGPD8O14715 1765 aaPredicted RBP20.34■□□□□ 0.85
SNCAIP-211ENST00000509023 ANP32CO43423 234 aa20.33■□□□□ 0.84
SNCAIP-211ENST00000509023 CARD14Q9BXL6 1004 aa20.33■□□□□ 0.84
SNCAIP-211ENST00000509023 TERF2IPQ9NYB0 399 aa20.33■□□□□ 0.84
SNCAIP-211ENST00000509023 DCCP43146 1447 aa20.33■□□□□ 0.84
SNCAIP-211ENST00000509023 MSH6P52701 1360 aa20.32■□□□□ 0.84
SNCAIP-211ENST00000509023 MIER1Q8N108 512 aa20.32■□□□□ 0.84
SNCAIP-211ENST00000509023 KNSTRNQ9Y448 316 aa20.32■□□□□ 0.84
SNCAIP-211ENST00000509023 HDGFL2Q7Z4V5 671 aaPredicted RBP20.31■□□□□ 0.84
SNCAIP-211ENST00000509023 NSD3Q9BZ95 1437 aa20.31■□□□□ 0.84
SNCAIP-211ENST00000509023 ATF3P18847 181 aa20.3■□□□□ 0.84
SNCAIP-211ENST00000509023 CNGB1Q14028 1251 aaPredicted RBP20.3■□□□□ 0.84
SNCAIP-211ENST00000509023 LTBP4Q8N2S1 1624 aa20.3■□□□□ 0.84
SNCAIP-211ENST00000509023 PLEKHG3A1L390 1219 aa20.29■□□□□ 0.84
SNCAIP-211ENST00000509023 CPSF1Q10570 1443 aaKnown RBP20.29■□□□□ 0.84
SNCAIP-211ENST00000509023 CADPS2Q86UW7 1296 aa20.27■□□□□ 0.84
SNCAIP-211ENST00000509023 PMFBP1Q8TBY8 1022 aa20.27■□□□□ 0.84
SNCAIP-211ENST00000509023 AKAP12Q02952 1782 aa20.27■□□□□ 0.84
SNCAIP-211ENST00000509023 AMER1Q5JTC6 1135 aaPredicted RBP20.26■□□□□ 0.83
SNCAIP-211ENST00000509023 ACEP12821 1306 aa20.26■□□□□ 0.83
SNCAIP-211ENST00000509023 MST1RQ04912 1400 aa20.26■□□□□ 0.83
SNCAIP-211ENST00000509023 C1orf167Q5SNV9 1468 aa20.26■□□□□ 0.83
SNCAIP-211ENST00000509023 CC2D1BQ5T0F9 858 aaKnown RBP20.26■□□□□ 0.83
SNCAIP-211ENST00000509023 PRKRIP1Q9H875 184 aaPredicted RBP20.26■□□□□ 0.83
SNCAIP-211ENST00000509023 KTN1Q86UP2 1357 aaKnown RBP20.26■□□□□ 0.83
SNCAIP-211ENST00000509023 MON2Q7Z3U7 1717 aa20.25■□□□□ 0.83
SNCAIP-211ENST00000509023 ESCO1Q5FWF5 840 aa20.25■□□□□ 0.83
SNCAIP-211ENST00000509023 POLR3AO14802 1390 aaPredicted RBP20.24■□□□□ 0.83
SNCAIP-211ENST00000509023 ZNF692Q9BU19 519 aaPredicted RBP20.24■□□□□ 0.83
SNCAIP-211ENST00000509023 NGDNQ8NEJ9 315 aaKnown RBP20.23■□□□□ 0.83
SNCAIP-211ENST00000509023 PHF8Q9UPP1 1060 aa20.23■□□□□ 0.83
SNCAIP-211ENST00000509023 NPC1L1Q9UHC9 1359 aa20.23■□□□□ 0.83
SNCAIP-211ENST00000509023 CGNL1Q0VF96 1302 aa20.23■□□□□ 0.83
SNCAIP-211ENST00000509023 ORAI2Q96SN7 254 aa20.23■□□□□ 0.83
SNCAIP-211ENST00000509023 EDC4Q6P2E9 1401 aaKnown RBP20.22■□□□□ 0.83
SNCAIP-211ENST00000509023 USP6P35125 1406 aa20.21■□□□□ 0.83
SNCAIP-211ENST00000509023 NRKQ7Z2Y5 1582 aa20.2■□□□□ 0.82
SNCAIP-211ENST00000509023 PARD3Q8TEW0 1356 aa20.2■□□□□ 0.82
SNCAIP-211ENST00000509023 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.19■□□□□ 0.82
SNCAIP-211ENST00000509023 RALBP1Q15311 655 aa20.19■□□□□ 0.82
SNCAIP-211ENST00000509023 KIF1AQ12756 1690 aa20.19■□□□□ 0.82
SNCAIP-211ENST00000509023 KIF20BQ96Q89 1820 aa20.17■□□□□ 0.82
SNCAIP-211ENST00000509023 NSD2O96028 1365 aa20.17■□□□□ 0.82
SNCAIP-211ENST00000509023 FYB1O15117 783 aa20.16■□□□□ 0.82
SNCAIP-211ENST00000509023 SLAIN2Q9P270 581 aa20.16■□□□□ 0.82
SNCAIP-211ENST00000509023 SSH2Q76I76 1423 aa20.16■□□□□ 0.82
SNCAIP-211ENST00000509023 TTC21BQ7Z4L5 1316 aa20.15■□□□□ 0.82
SNCAIP-211ENST00000509023 GGNBP2Q9H3C7 697 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms