RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 MED14O60244 1454 aa13.72□□□□□ -0.21
COL4A3BP-206ENST00000508809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.71□□□□□ -0.21
COL4A3BP-206ENST00000508809 PAXIP1Q6ZW49 1069 aaPredicted RBP13.71□□□□□ -0.21
COL4A3BP-206ENST00000508809 CFAP44Q96MT7 982 aa13.71□□□□□ -0.21
COL4A3BP-206ENST00000508809 DEPDC5O75140 1603 aa13.69□□□□□ -0.22
COL4A3BP-206ENST00000508809 HSPA1LP34931 641 aa13.69□□□□□ -0.22
COL4A3BP-206ENST00000508809 VWDEQ8N2E2 1590 aa13.69□□□□□ -0.22
COL4A3BP-206ENST00000508809 UGGT1Q9NYU2 1555 aa13.69□□□□□ -0.22
COL4A3BP-206ENST00000508809 TMEM92Q6UXU6 159 aa13.68□□□□□ -0.22
COL4A3BP-206ENST00000508809 FAM163AQ96GL9 167 aaPredicted RBP13.68□□□□□ -0.22
COL4A3BP-206ENST00000508809 RNF17Q9BXT8 1623 aaKnown RBP13.68□□□□□ -0.22
COL4A3BP-206ENST00000508809 NPHP4O75161 1426 aaPredicted RBP13.67□□□□□ -0.22
COL4A3BP-206ENST00000508809 RIMBP2O15034 1052 aa13.67□□□□□ -0.22
COL4A3BP-206ENST00000508809 PIP4K2BP78356 416 aa13.67□□□□□ -0.22
COL4A3BP-206ENST00000508809 DOK7Q18PE1 504 aa13.67□□□□□ -0.22
COL4A3BP-206ENST00000508809 LRRC9Q6ZRR7 1453 aa13.67□□□□□ -0.22
COL4A3BP-206ENST00000508809 MAST1Q9Y2H9 1570 aa13.66□□□□□ -0.22
COL4A3BP-206ENST00000508809 CFAP65Q6ZU64 1925 aaKnown RBP13.66□□□□□ -0.22
COL4A3BP-206ENST00000508809 ABCC3O15438 1527 aa13.65□□□□□ -0.22
COL4A3BP-206ENST00000508809 C2orf72A6NCS6 295 aa13.65□□□□□ -0.22
COL4A3BP-206ENST00000508809 ALKQ9UM73 1620 aa13.64□□□□□ -0.23
COL4A3BP-206ENST00000508809 ZC3H13Q5T200 1668 aaKnown RBP13.64□□□□□ -0.23
COL4A3BP-206ENST00000508809 ZNF710Q8N1W2 664 aa13.64□□□□□ -0.23
COL4A3BP-206ENST00000508809 EIF2AK4Q9P2K8 1649 aaKnown RBP13.64□□□□□ -0.23
COL4A3BP-206ENST00000508809 VPS8Q8N3P4 1428 aa13.64□□□□□ -0.23
COL4A3BP-206ENST00000508809 IQGAP1P46940 1657 aa13.63□□□□□ -0.23
COL4A3BP-206ENST00000508809 KANK4Q5T7N3 995 aaPredicted RBP13.63□□□□□ -0.23
COL4A3BP-206ENST00000508809 MAP3K1Q13233 1512 aa13.63□□□□□ -0.23
COL4A3BP-206ENST00000508809 STRCP1A6NGW2 1772 aa13.63□□□□□ -0.23
COL4A3BP-206ENST00000508809 ERVK-7P63135 1459 aa13.62□□□□□ -0.23
COL4A3BP-206ENST00000508809 MED1Q15648 1581 aaPredicted RBP13.62□□□□□ -0.23
COL4A3BP-206ENST00000508809 MROH1Q8NDA8 1641 aa13.61□□□□□ -0.23
COL4A3BP-206ENST00000508809 LRRC7Q96NW7 1537 aa13.61□□□□□ -0.23
COL4A3BP-206ENST00000508809 KIF3CO14782 793 aa13.61□□□□□ -0.23
COL4A3BP-206ENST00000508809 PDE4AP27815 886 aa13.61□□□□□ -0.23
COL4A3BP-206ENST00000508809 GPHNQ9NQX3 736 aaPredicted RBP13.61□□□□□ -0.23
COL4A3BP-206ENST00000508809 MYOM3Q5VTT5 1437 aa13.6□□□□□ -0.23
COL4A3BP-206ENST00000508809 UBR1Q8IWV7 1749 aa13.59□□□□□ -0.23
COL4A3BP-206ENST00000508809 ARHGAP31Q2M1Z3 1444 aa13.59□□□□□ -0.23
COL4A3BP-206ENST00000508809 LOC105371045A0A1W2PR82 267 aa13.59□□□□□ -0.23
COL4A3BP-206ENST00000508809 LTKP29376 864 aa13.59□□□□□ -0.23
COL4A3BP-206ENST00000508809 DUOX2Q9NRD8 1548 aa13.59□□□□□ -0.23
COL4A3BP-206ENST00000508809 ARHGAP23Q9P227 1491 aa13.58□□□□□ -0.24
COL4A3BP-206ENST00000508809 CEP152O94986 1710 aa13.58□□□□□ -0.24
COL4A3BP-206ENST00000508809 SLIT1O75093 1534 aa13.57□□□□□ -0.24
COL4A3BP-206ENST00000508809 TXNDC2Q86VQ3 553 aa13.56□□□□□ -0.24
COL4A3BP-206ENST00000508809 SYNMO15061 1565 aa13.56□□□□□ -0.24
COL4A3BP-206ENST00000508809 SCAF11Q99590 1463 aaKnown RBP13.55□□□□□ -0.24
COL4A3BP-206ENST00000508809 ST18O60284 1047 aa13.55□□□□□ -0.24
COL4A3BP-206ENST00000508809 FOXK1P85037 733 aa13.55□□□□□ -0.24
COL4A3BP-206ENST00000508809 CRISPLD2Q9H0B8 497 aa13.55□□□□□ -0.24
COL4A3BP-206ENST00000508809 ABCC5O15440 1437 aa13.55□□□□□ -0.24
COL4A3BP-206ENST00000508809 HOXB3P14651 431 aaPredicted RBP13.54□□□□□ -0.24
COL4A3BP-206ENST00000508809 ZSWIM6Q9HCJ5 1215 aa13.54□□□□□ -0.24
COL4A3BP-206ENST00000508809 KIF15Q9NS87 1388 aa13.54□□□□□ -0.24
COL4A3BP-206ENST00000508809 ERBINQ96RT1 1412 aa13.54□□□□□ -0.24
COL4A3BP-206ENST00000508809 PRDM15P57071 1507 aaPredicted RBP13.54□□□□□ -0.24
COL4A3BP-206ENST00000508809 RRP7BPQ9NSQ0 103 aa13.53□□□□□ -0.24
COL4A3BP-206ENST00000508809 XIRP1Q702N8 1843 aaKnown RBP13.53□□□□□ -0.24
COL4A3BP-206ENST00000508809 EID1Q9Y6B2 187 aa13.52□□□□□ -0.25
COL4A3BP-206ENST00000508809 TMEM2Q9UHN6 1383 aa13.51□□□□□ -0.25
COL4A3BP-206ENST00000508809 PLPP6Q8IY26 295 aa13.51□□□□□ -0.25
COL4A3BP-206ENST00000508809 LARP6Q9BRS8 491 aaKnown RBP13.51□□□□□ -0.25
COL4A3BP-206ENST00000508809 IDI1Q13907 227 aa13.5□□□□□ -0.25
COL4A3BP-206ENST00000508809 PPP1R15BQ5SWA1 713 aa13.5□□□□□ -0.25
COL4A3BP-206ENST00000508809 DDX27Q96GQ7 796 aaKnown RBP13.5□□□□□ -0.25
COL4A3BP-206ENST00000508809 CROCC2H7BZ55 1655 aa13.5□□□□□ -0.25
COL4A3BP-206ENST00000508809 KDM5AP29375 1690 aaKnown RBP13.5□□□□□ -0.25
COL4A3BP-206ENST00000508809 DSG2Q14126 1118 aa13.49□□□□□ -0.25
COL4A3BP-206ENST00000508809 PIK3C2BO00750 1634 aa13.49□□□□□ -0.25
COL4A3BP-206ENST00000508809 PTPN23Q9H3S7 1636 aa13.49□□□□□ -0.25
COL4A3BP-206ENST00000508809 LMTK2Q8IWU2 1503 aa13.49□□□□□ -0.25
COL4A3BP-206ENST00000508809 DAPK1P53355 1430 aa13.48□□□□□ -0.25
COL4A3BP-206ENST00000508809 FAM135BQ49AJ0 1406 aa13.48□□□□□ -0.25
COL4A3BP-206ENST00000508809 RGS17Q9UGC6 210 aaPredicted RBP13.48□□□□□ -0.25
COL4A3BP-206ENST00000508809 KANK1Q14678 1352 aa13.47□□□□□ -0.25
COL4A3BP-206ENST00000508809 KCNA6P17658 529 aa13.47□□□□□ -0.25
COL4A3BP-206ENST00000508809 TET3O43151 1660 aa13.47□□□□□ -0.25
COL4A3BP-206ENST00000508809 SLC34A2O95436 690 aa13.46□□□□□ -0.25
COL4A3BP-206ENST00000508809 PLCB2Q00722 1185 aa13.46□□□□□ -0.25
COL4A3BP-206ENST00000508809 CADPS2Q86UW7 1296 aa13.46□□□□□ -0.25
COL4A3BP-206ENST00000508809 FGD6Q6ZV73 1430 aa13.46□□□□□ -0.26
COL4A3BP-206ENST00000508809 ANKRD30AQ9BXX3 1397 aa13.45□□□□□ -0.26
COL4A3BP-206ENST00000508809 POTEMA6NI47 508 aa13.45□□□□□ -0.26
COL4A3BP-206ENST00000508809 HOXB1P14653 301 aaPredicted RBP13.45□□□□□ -0.26
COL4A3BP-206ENST00000508809 EMP3P54852 163 aa13.45□□□□□ -0.26
COL4A3BP-206ENST00000508809 POTEGQ6S5H5 508 aa13.45□□□□□ -0.26
COL4A3BP-206ENST00000508809 NOS1P29475 1434 aa13.45□□□□□ -0.26
COL4A3BP-206ENST00000508809 EFCAB6Q5THR3 1501 aa13.44□□□□□ -0.26
COL4A3BP-206ENST00000508809 LCE2DQ5TA82 110 aaPredicted RBP13.44□□□□□ -0.26
COL4A3BP-206ENST00000508809 SLC52A1Q9NWF4 448 aa13.44□□□□□ -0.26
COL4A3BP-206ENST00000508809 CHIC2Q9UKJ5 165 aa13.44□□□□□ -0.26
COL4A3BP-206ENST00000508809 TMEM94Q12767 1356 aa13.44□□□□□ -0.26
COL4A3BP-206ENST00000508809 TBC1D12O60347 775 aa13.43□□□□□ -0.26
COL4A3BP-206ENST00000508809 MFSD10Q14728 455 aa13.43□□□□□ -0.26
COL4A3BP-206ENST00000508809 SLC26A8Q96RN1 970 aa13.42□□□□□ -0.26
COL4A3BP-206ENST00000508809 WDR70Q9NW82 654 aa13.42□□□□□ -0.26
COL4A3BP-206ENST00000508809 PROSER2Q86WR7 435 aaPredicted RBP13.41□□□□□ -0.26
COL4A3BP-206ENST00000508809 MARVELD3Q96A59 401 aa13.41□□□□□ -0.26
COL4A3BP-206ENST00000508809 ADGRL2O95490 1459 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms