RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 SLC27A5Q9Y2P5 690 aa7.93□□□□□ -1.14
COL4A3BP-205ENST00000508692 ZMYND10O75800 440 aa7.92□□□□□ -1.14
COL4A3BP-205ENST00000508692 SMPD1P17405 629 aa7.92□□□□□ -1.14
COL4A3BP-205ENST00000508692 ATP13A2Q9NQ11 1180 aa7.92□□□□□ -1.14
COL4A3BP-205ENST00000508692 FMNL1O95466 1100 aaPredicted RBP7.91□□□□□ -1.14
COL4A3BP-205ENST00000508692 TMEM132AQ24JP5 1023 aa7.91□□□□□ -1.14
COL4A3BP-205ENST00000508692 NLRP7Q8WX94 980 aa7.91□□□□□ -1.14
COL4A3BP-205ENST00000508692 TERTO14746 1132 aaKnown RBP7.9□□□□□ -1.14
COL4A3BP-205ENST00000508692 DDX11L8A8MPP1 907 aa7.89□□□□□ -1.15
COL4A3BP-205ENST00000508692 WNT7AO00755 349 aa7.89□□□□□ -1.15
COL4A3BP-205ENST00000508692 ATP6V1AP38606 617 aa7.89□□□□□ -1.15
COL4A3BP-205ENST00000508692 BARGINQ6ZT62 677 aa7.89□□□□□ -1.15
COL4A3BP-205ENST00000508692 GPIHBP1Q8IV16 184 aa7.89□□□□□ -1.15
COL4A3BP-205ENST00000508692 J3QL48 77 aa7.88□□□□□ -1.15
COL4A3BP-205ENST00000508692 ZBTB24O43167 697 aaPredicted RBP7.88□□□□□ -1.15
COL4A3BP-205ENST00000508692 RBM26Q5T8P6 1007 aaKnown RBP7.88□□□□□ -1.15
COL4A3BP-205ENST00000508692 BRICD5Q6PL45 260 aa7.88□□□□□ -1.15
COL4A3BP-205ENST00000508692 RNF19BQ6ZMZ0 732 aa7.88□□□□□ -1.15
COL4A3BP-205ENST00000508692 SNIP1Q8TAD8 396 aaKnown RBP7.88□□□□□ -1.15
COL4A3BP-205ENST00000508692 TRIM47Q96LD4 638 aa7.88□□□□□ -1.15
COL4A3BP-205ENST00000508692 DAXXQ9UER7 740 aaPredicted RBP7.88□□□□□ -1.15
COL4A3BP-205ENST00000508692 FECHP22830 423 aa7.87□□□□□ -1.15
COL4A3BP-205ENST00000508692 HIC1Q14526 733 aa7.87□□□□□ -1.15
COL4A3BP-205ENST00000508692 MRGPRX2Q96LB1 330 aa7.87□□□□□ -1.15
COL4A3BP-205ENST00000508692 SLC24A3Q9HC58 644 aa7.87□□□□□ -1.15
COL4A3BP-205ENST00000508692 GCGRP47871 477 aa7.86□□□□□ -1.15
COL4A3BP-205ENST00000508692 TRIM32Q13049 653 aa7.86□□□□□ -1.15
COL4A3BP-205ENST00000508692 MSS51Q4VC12 460 aa7.86□□□□□ -1.15
COL4A3BP-205ENST00000508692 SALL2Q9Y467 1007 aaPredicted RBP7.86□□□□□ -1.15
COL4A3BP-205ENST00000508692 KRI1Q8N9T8 703 aaKnown RBP7.85□□□□□ -1.15
COL4A3BP-205ENST00000508692 HPS1Q92902 700 aa7.85□□□□□ -1.15
COL4A3BP-205ENST00000508692 SENP2Q9HC62 589 aa7.85□□□□□ -1.15
COL4A3BP-205ENST00000508692 BRPF1P55201 1214 aaPredicted RBP7.84□□□□□ -1.15
COL4A3BP-205ENST00000508692 AK7Q96M32 723 aa7.84□□□□□ -1.15
COL4A3BP-205ENST00000508692 ERICH6Q7L0X2 663 aa7.83□□□□□ -1.16
COL4A3BP-205ENST00000508692 NEUROD2Q15784 382 aa7.82□□□□□ -1.16
COL4A3BP-205ENST00000508692 PHOX2BQ99453 314 aa7.82□□□□□ -1.16
COL4A3BP-205ENST00000508692 GNPATO15228 680 aa7.81□□□□□ -1.16
COL4A3BP-205ENST00000508692 GPR37O15354 613 aa7.8□□□□□ -1.16
COL4A3BP-205ENST00000508692 MMP16P51512 607 aa7.8□□□□□ -1.16
COL4A3BP-205ENST00000508692 SULF1Q8IWU6 871 aa7.8□□□□□ -1.16
COL4A3BP-205ENST00000508692 KIFC2Q96AC6 838 aa7.8□□□□□ -1.16
COL4A3BP-205ENST00000508692 GTF3C3Q9Y5Q9 886 aa7.8□□□□□ -1.16
COL4A3BP-205ENST00000508692 SKOR1P84550 965 aa7.78□□□□□ -1.16
COL4A3BP-205ENST00000508692 REPIN1Q9BWE0 567 aaKnown RBP7.78□□□□□ -1.16
COL4A3BP-205ENST00000508692 LORP23490 312 aaPredicted RBP7.77□□□□□ -1.17
COL4A3BP-205ENST00000508692 GMPRP36959 345 aa7.77□□□□□ -1.17
COL4A3BP-205ENST00000508692 RC3H1Q5TC82 1133 aaKnown RBP7.77□□□□□ -1.17
COL4A3BP-205ENST00000508692 MINK1Q8N4C8 1332 aaPredicted RBP7.77□□□□□ -1.17
COL4A3BP-205ENST00000508692 DXOO77932 396 aaKnown RBP7.76□□□□□ -1.17
COL4A3BP-205ENST00000508692 Q3C1V9 767 aa7.76□□□□□ -1.17
COL4A3BP-205ENST00000508692 GRIPAP1Q4V328 841 aa7.76□□□□□ -1.17
COL4A3BP-205ENST00000508692 LOC100996750A0A140TA64 210 aa7.75□□□□□ -1.17
COL4A3BP-205ENST00000508692 BMP1P13497 986 aa7.75□□□□□ -1.17
COL4A3BP-205ENST00000508692 CCDC24Q8N4L8 307 aa7.75□□□□□ -1.17
COL4A3BP-205ENST00000508692 SLC16A10Q8TF71 515 aa7.75□□□□□ -1.17
COL4A3BP-205ENST00000508692 USB1Q9BQ65 265 aaKnown RBP7.75□□□□□ -1.17
COL4A3BP-205ENST00000508692 KRTAP4-6Q9BYQ5 205 aa7.75□□□□□ -1.17
COL4A3BP-205ENST00000508692 NXF1Q9UBU9 619 aaKnown RBP7.75□□□□□ -1.17
COL4A3BP-205ENST00000508692 FAM181BA6NEQ2 426 aa7.74□□□□□ -1.17
COL4A3BP-205ENST00000508692 TRIM66O15016 1216 aa7.74□□□□□ -1.17
COL4A3BP-205ENST00000508692 ALDH1A1P00352 501 aa7.74□□□□□ -1.17
COL4A3BP-205ENST00000508692 VEGFBP49765 207 aa7.74□□□□□ -1.17
COL4A3BP-205ENST00000508692 MAP2K5Q13163 448 aa7.73□□□□□ -1.17
COL4A3BP-205ENST00000508692 ZSCAN1Q8NBB4 408 aa7.73□□□□□ -1.17
COL4A3BP-205ENST00000508692 HLA-CQ95604 372 aa7.73□□□□□ -1.17
COL4A3BP-205ENST00000508692 IRF6O14896 467 aa7.72□□□□□ -1.17
COL4A3BP-205ENST00000508692 WNT7BP56706 349 aa7.72□□□□□ -1.17
COL4A3BP-205ENST00000508692 TRIM46Q7Z4K8 759 aa7.72□□□□□ -1.17
COL4A3BP-205ENST00000508692 PDE4DQ08499 809 aa7.71□□□□□ -1.18
COL4A3BP-205ENST00000508692 ERBB4Q15303 1308 aa7.71□□□□□ -1.18
COL4A3BP-205ENST00000508692 CD46P15529 392 aa7.7□□□□□ -1.18
COL4A3BP-205ENST00000508692 IRF7Q92985 503 aa7.7□□□□□ -1.18
COL4A3BP-205ENST00000508692 H3BM21 787 aa7.69□□□□□ -1.18
COL4A3BP-205ENST00000508692 KDM4AO75164 1064 aa7.69□□□□□ -1.18
COL4A3BP-205ENST00000508692 CAPN5O15484 640 aaPredicted RBP7.68□□□□□ -1.18
COL4A3BP-205ENST00000508692 KDM4CQ9H3R0 1056 aa7.68□□□□□ -1.18
COL4A3BP-205ENST00000508692 SIAH2O43255 324 aa7.67□□□□□ -1.18
COL4A3BP-205ENST00000508692 NPAS3Q8IXF0 933 aa7.67□□□□□ -1.18
COL4A3BP-205ENST00000508692 GUCA2AQ02747 115 aa7.66□□□□□ -1.18
COL4A3BP-205ENST00000508692 AMHR2Q16671 573 aa7.66□□□□□ -1.18
COL4A3BP-205ENST00000508692 EHBP1Q8NDI1 1231 aa7.66□□□□□ -1.18
COL4A3BP-205ENST00000508692 CCDC102AQ96A19 550 aa7.66□□□□□ -1.18
COL4A3BP-205ENST00000508692 JUNDP17535 347 aa7.65□□□□□ -1.18
COL4A3BP-205ENST00000508692 PTCRAQ6ISU1 281 aaPredicted RBP7.65□□□□□ -1.18
COL4A3BP-205ENST00000508692 SYMPKQ92797 1274 aaKnown RBP7.65□□□□□ -1.18
COL4A3BP-205ENST00000508692 GPBP1L1Q9HC44 474 aaPredicted RBP7.65□□□□□ -1.18
COL4A3BP-205ENST00000508692 WASF2Q9Y6W5 498 aa7.65□□□□□ -1.18
COL4A3BP-205ENST00000508692 HOXA2O43364 376 aa7.64□□□□□ -1.19
COL4A3BP-205ENST00000508692 USP46P62068 366 aa7.63□□□□□ -1.19
COL4A3BP-205ENST00000508692 IL27Q8NEV9 243 aa7.63□□□□□ -1.19
COL4A3BP-205ENST00000508692 DDRGK1Q96HY6 314 aa7.63□□□□□ -1.19
COL4A3BP-205ENST00000508692 ZFP42Q96MM3 310 aa7.63□□□□□ -1.19
COL4A3BP-205ENST00000508692 NUDT12Q9BQG2 462 aa7.62□□□□□ -1.19
COL4A3BP-205ENST00000508692 TIMELESSQ9UNS1 1208 aa7.62□□□□□ -1.19
COL4A3BP-205ENST00000508692 SH3BP2P78314 561 aa7.61□□□□□ -1.19
COL4A3BP-205ENST00000508692 MDM2Q00987 491 aaPredicted RBP7.61□□□□□ -1.19
COL4A3BP-205ENST00000508692 TLL2Q9Y6L7 1015 aa7.61□□□□□ -1.19
COL4A3BP-205ENST00000508692 SOBPA7XYQ1 873 aa7.59□□□□□ -1.19
COL4A3BP-205ENST00000508692 TTLL12Q14166 644 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms