RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 GORABQ5T7V8 394 aa8.77□□□□□ -1.01
UBE2D3-224ENST00000508474 STAC3Q96MF2 364 aa8.77□□□□□ -1.01
UBE2D3-224ENST00000508474 SENP3Q9H4L4 574 aaPredicted RBP8.77□□□□□ -1.01
UBE2D3-224ENST00000508474 WIZO95785 1651 aa8.77□□□□□ -1.01
UBE2D3-224ENST00000508474 CCDC47Q96A33 483 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-224ENST00000508474 TRIM29Q14134 588 aa8.77□□□□□ -1.01
UBE2D3-224ENST00000508474 AEBP1Q8IUX7 1158 aa8.77□□□□□ -1.01
UBE2D3-224ENST00000508474 DNAJC2Q99543 621 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-224ENST00000508474 RUSC2Q8N2Y8 1516 aa8.76□□□□□ -1.01
UBE2D3-224ENST00000508474 PSMA5P28066 241 aa8.76□□□□□ -1.01
UBE2D3-224ENST00000508474 HSP90AB4PQ58FF6 505 aa8.76□□□□□ -1.01
UBE2D3-224ENST00000508474 FAM107BQ9H098 131 aa8.76□□□□□ -1.01
UBE2D3-224ENST00000508474 ADAMTS8Q9UP79 889 aa8.76□□□□□ -1.01
UBE2D3-224ENST00000508474 NBPF1Q3BBV0 1214 aa8.76□□□□□ -1.01
UBE2D3-224ENST00000508474 SPC24Q8NBT2 197 aa8.76□□□□□ -1.01
UBE2D3-224ENST00000508474 PLEKHH2Q8IVE3 1493 aa8.76□□□□□ -1.01
UBE2D3-224ENST00000508474 ERICH4A6NGS2 130 aa8.76□□□□□ -1.01
UBE2D3-224ENST00000508474 KINO60870 393 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-224ENST00000508474 NEK4P51957 841 aa8.75□□□□□ -1.01
UBE2D3-224ENST00000508474 TIGD1Q96MW7 591 aa8.75□□□□□ -1.01
UBE2D3-224ENST00000508474 ZHX1Q9UKY1 873 aaPredicted RBP8.75□□□□□ -1.01
UBE2D3-224ENST00000508474 ERC2O15083 957 aa8.75□□□□□ -1.01
UBE2D3-224ENST00000508474 TMCO3Q6UWJ1 677 aa8.75□□□□□ -1.01
UBE2D3-224ENST00000508474 SMAP1Q8IYB5 467 aaPredicted RBP8.75□□□□□ -1.01
UBE2D3-224ENST00000508474 SDF4Q9BRK5 362 aa8.75□□□□□ -1.01
UBE2D3-224ENST00000508474 GNAI1P63096 354 aa8.75□□□□□ -1.01
UBE2D3-224ENST00000508474 LRRC9Q6ZRR7 1453 aa8.75□□□□□ -1.01
UBE2D3-224ENST00000508474 SMARCA2P51531 1590 aa8.75□□□□□ -1.01
UBE2D3-224ENST00000508474 SAFB2Q14151 953 aaKnown RBP eCLIP8.75□□□□□ -1.01
UBE2D3-224ENST00000508474 CARMIL2Q6F5E8 1435 aa8.75□□□□□ -1.01
UBE2D3-224ENST00000508474 SYNE3Q6ZMZ3 975 aa8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 BBXQ8WY36 941 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 SMARCE1Q969G3 411 aa8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 SMC2O95347 1197 aa8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 XPCQ01831 940 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 PPP4R3BQ5MIZ7 849 aa8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 AXDND1Q5T1B0 1012 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 GIMAP7Q8NHV1 300 aa8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 MYOM3Q5VTT5 1437 aa8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 CPLX1O14810 134 aa8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 HSP90AB3PQ58FF7 597 aa8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 CAGE1Q8TC20 777 aa8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 UBXN4Q92575 508 aa8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 GBP3Q9H0R5 595 aa8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 HS1BP3Q53T59 392 aa8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 FILIP1Q7Z7B0 1213 aa8.74□□□□□ -1.01
UBE2D3-224ENST00000508474 WDR97A6NE52 1622 aa8.73□□□□□ -1.01
UBE2D3-224ENST00000508474 GOLGA6L7A0A1B0GV03 622 aa8.73□□□□□ -1.01
UBE2D3-224ENST00000508474 RIPK4P57078 832 aa8.73□□□□□ -1.01
UBE2D3-224ENST00000508474 AKAP17AQ02040 695 aaKnown RBP8.73□□□□□ -1.01
UBE2D3-224ENST00000508474 PCMTD1Q96MG8 357 aaPredicted RBP8.73□□□□□ -1.01
UBE2D3-224ENST00000508474 TNMDQ9H2S6 317 aa8.73□□□□□ -1.01
UBE2D3-224ENST00000508474 MYO6Q9UM54 1294 aa8.73□□□□□ -1.01
UBE2D3-224ENST00000508474 CBFA2T2O43439 604 aa8.73□□□□□ -1.01
UBE2D3-224ENST00000508474 PDILTQ8N807 584 aa8.73□□□□□ -1.01
UBE2D3-224ENST00000508474 CLSTN1O94985 981 aa8.73□□□□□ -1.01
UBE2D3-224ENST00000508474 ZNF396Q96N95 335 aaPredicted RBP8.73□□□□□ -1.01
UBE2D3-224ENST00000508474 NPHP1O15259 732 aa8.73□□□□□ -1.01
UBE2D3-224ENST00000508474 IFIT2P09913 472 aaKnown RBP8.73□□□□□ -1.01
UBE2D3-224ENST00000508474 UVSSAQ2YD98 709 aa8.73□□□□□ -1.01
UBE2D3-224ENST00000508474 SCAPERQ9BY12 1400 aa8.72□□□□□ -1.01
UBE2D3-224ENST00000508474 FIBPO43427 364 aa8.72□□□□□ -1.01
UBE2D3-224ENST00000508474 DIAPH1O60610 1272 aaKnown RBP8.72□□□□□ -1.01
UBE2D3-224ENST00000508474 EVC2Q86UK5 1308 aa8.72□□□□□ -1.01
UBE2D3-224ENST00000508474 NEMFO60524 1076 aa8.72□□□□□ -1.01
UBE2D3-224ENST00000508474 KRT85P78386 507 aa8.72□□□□□ -1.01
UBE2D3-224ENST00000508474 CCDC94Q9BW85 323 aaPredicted RBP8.72□□□□□ -1.01
UBE2D3-224ENST00000508474 SYCE3A1L190 88 aa8.72□□□□□ -1.01
UBE2D3-224ENST00000508474 ELL2O00472 640 aaPredicted RBP8.72□□□□□ -1.01
UBE2D3-224ENST00000508474 KIF18AQ8NI77 898 aa8.72□□□□□ -1.01
UBE2D3-224ENST00000508474 STK26Q9P289 416 aa8.72□□□□□ -1.01
UBE2D3-224ENST00000508474 XRCC6P12956 609 aaKnown RBP eCLIP8.71□□□□□ -1.01
UBE2D3-224ENST00000508474 PTPN14Q15678 1187 aa8.71□□□□□ -1.01
UBE2D3-224ENST00000508474 FILIP1LQ4L180 1135 aa8.71□□□□□ -1.01
UBE2D3-224ENST00000508474 A0A0G2JS52 829 aa8.71□□□□□ -1.01
UBE2D3-224ENST00000508474 PPP2R1AP30153 589 aa8.71□□□□□ -1.01
UBE2D3-224ENST00000508474 PIP4K2AP48426 406 aaPredicted RBP8.71□□□□□ -1.01
UBE2D3-224ENST00000508474 MVPQ14764 893 aaKnown RBP8.71□□□□□ -1.01
UBE2D3-224ENST00000508474 TBC1D2Q9BYX2 928 aa8.71□□□□□ -1.01
UBE2D3-224ENST00000508474 WDR63Q8IWG1 891 aa8.71□□□□□ -1.02
UBE2D3-224ENST00000508474 CNTROBQ8N137 903 aa8.71□□□□□ -1.02
UBE2D3-224ENST00000508474 BCL11BQ9C0K0 894 aaPredicted RBP8.71□□□□□ -1.02
UBE2D3-224ENST00000508474 ZRSR2Q15696 482 aaKnown RBP8.71□□□□□ -1.02
UBE2D3-224ENST00000508474 KLHL40Q2TBA0 621 aa8.71□□□□□ -1.02
UBE2D3-224ENST00000508474 OFD1O75665 1012 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 BMS1Q14692 1282 aaKnown RBP8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 CCDC27Q2M243 656 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 CCDC183Q5T5S1 534 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 NUP62CLQ9H1M0 184 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 PLEKHH1Q9ULM0 1364 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 IQCEQ6IPM2 695 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 TNPO1Q92973 898 aaKnown RBP8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 DDX11Q96FC9 970 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 NOL10Q9BSC4 688 aaKnown RBP8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 PAXBP1Q9Y5B6 917 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 DHX29Q7Z478 1369 aaKnown RBP8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 HIP1O00291 1037 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 SAFBQ15424 915 aaKnown RBP eCLIP8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 EFCAB2Q5VUJ9 269 aa8.7□□□□□ -1.02
UBE2D3-224ENST00000508474 TXLNBQ8N3L3 684 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms