RNA–Protein interactions for RNA: ENST00000506891.1

TTC39B-205, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-205ENST00000506891 KNDC1Q76NI1 1749 aa17.61■□□□□ 0.41
TTC39B-205ENST00000506891 ESCO1Q5FWF5 840 aa17.61■□□□□ 0.41
TTC39B-205ENST00000506891 SOS2Q07890 1332 aaPredicted RBP17.6■□□□□ 0.41
TTC39B-205ENST00000506891 ASXL1Q8IXJ9 1541 aa17.6■□□□□ 0.41
TTC39B-205ENST00000506891 MEX3CQ5U5Q3 659 aaKnown RBP17.59■□□□□ 0.41
TTC39B-205ENST00000506891 PHLPP1O60346 1717 aa17.58■□□□□ 0.41
TTC39B-205ENST00000506891 DDX17Q92841 729 aaKnown RBP17.58■□□□□ 0.4
TTC39B-205ENST00000506891 POGKQ9P215 609 aa17.58■□□□□ 0.4
TTC39B-205ENST00000506891 NPHP3Q7Z494 1330 aa17.57■□□□□ 0.4
TTC39B-205ENST00000506891 ZNF772Q68DY9 489 aaPredicted RBP17.57■□□□□ 0.4
TTC39B-205ENST00000506891 POTEAQ6S8J7 498 aa17.57■□□□□ 0.4
TTC39B-205ENST00000506891 PRAM1Q96QH2 718 aa17.57■□□□□ 0.4
TTC39B-205ENST00000506891 COL16A1Q07092 1604 aaPredicted RBP17.57■□□□□ 0.4
TTC39B-205ENST00000506891 PLEKHH1Q9ULM0 1364 aa17.56■□□□□ 0.4
TTC39B-205ENST00000506891 DLC1Q96QB1 1528 aa17.56■□□□□ 0.4
TTC39B-205ENST00000506891 NALCNQ8IZF0 1738 aa17.55■□□□□ 0.4
TTC39B-205ENST00000506891 CDC42BPGQ6DT37 1551 aa17.55■□□□□ 0.4
TTC39B-205ENST00000506891 NUTM2BA6NNL0 878 aaPredicted RBP17.55■□□□□ 0.4
TTC39B-205ENST00000506891 NUTM2EB1AL46 878 aaPredicted RBP17.55■□□□□ 0.4
TTC39B-205ENST00000506891 NUTM2AQ8IVF1 878 aaPredicted RBP17.55■□□□□ 0.4
TTC39B-205ENST00000506891 FOXO3O43524 673 aa17.54■□□□□ 0.4
TTC39B-205ENST00000506891 TRAK1Q9UPV9 953 aa17.54■□□□□ 0.4
TTC39B-205ENST00000506891 ADGRB1O14514 1584 aa17.53■□□□□ 0.4
TTC39B-205ENST00000506891 KIAA1210Q9ULL0 1709 aa17.52■□□□□ 0.4
TTC39B-205ENST00000506891 NUTM2FA1L443 756 aa17.52■□□□□ 0.4
TTC39B-205ENST00000506891 PNPLA6Q8IY17 1366 aa17.52■□□□□ 0.39
TTC39B-205ENST00000506891 SAFB2Q14151 953 aaKnown RBP eCLIP17.5■□□□□ 0.39
TTC39B-205ENST00000506891 PSME1Q06323 249 aa17.49■□□□□ 0.39
TTC39B-205ENST00000506891 PHF8Q9UPP1 1060 aa17.49■□□□□ 0.39
TTC39B-205ENST00000506891 LRP6O75581 1613 aa17.47■□□□□ 0.39
TTC39B-205ENST00000506891 KRT28Q7Z3Y7 464 aa17.47■□□□□ 0.39
TTC39B-205ENST00000506891 WASLO00401 505 aaPredicted RBP17.46■□□□□ 0.39
TTC39B-205ENST00000506891 NHSL1Q5SYE7 1610 aa17.46■□□□□ 0.39
TTC39B-205ENST00000506891 SHPRHQ149N8 1683 aa17.45■□□□□ 0.38
TTC39B-205ENST00000506891 EIF3AQ14152 1382 aaKnown RBP17.45■□□□□ 0.38
TTC39B-205ENST00000506891 RXRBP28702 533 aa17.45■□□□□ 0.38
TTC39B-205ENST00000506891 NGLY1Q96IV0 654 aa17.45■□□□□ 0.38
TTC39B-205ENST00000506891 AFF2P51816 1311 aa17.45■□□□□ 0.38
TTC39B-205ENST00000506891 ADGRB2O60241 1585 aa17.45■□□□□ 0.38
TTC39B-205ENST00000506891 L3MBTL2Q969R5 705 aa17.44■□□□□ 0.38
TTC39B-205ENST00000506891 C8orf37Q96NL8 207 aa17.44■□□□□ 0.38
TTC39B-205ENST00000506891 SPATA31A3Q5VYP0 1347 aa17.44■□□□□ 0.38
TTC39B-205ENST00000506891 ADAMTS2O95450 1211 aa17.43■□□□□ 0.38
TTC39B-205ENST00000506891 XPCQ01831 940 aaPredicted RBP17.43■□□□□ 0.38
TTC39B-205ENST00000506891 FNBP4Q8N3X1 1017 aaPredicted RBP17.43■□□□□ 0.38
TTC39B-205ENST00000506891 SIN3AQ96ST3 1273 aa17.43■□□□□ 0.38
TTC39B-205ENST00000506891 QTRT2Q9H974 415 aaKnown RBP17.43■□□□□ 0.38
TTC39B-205ENST00000506891 MINK1Q8N4C8 1332 aaPredicted RBP17.43■□□□□ 0.38
TTC39B-205ENST00000506891 ANKARQ7Z5J8 1434 aa17.42■□□□□ 0.38
TTC39B-205ENST00000506891 HIRIP3Q9BW71 556 aaPredicted RBP17.42■□□□□ 0.38
TTC39B-205ENST00000506891 NBPF1Q3BBV0 1214 aa17.41■□□□□ 0.38
TTC39B-205ENST00000506891 FMN2Q9NZ56 1722 aa17.41■□□□□ 0.38
TTC39B-205ENST00000506891 PXDNQ92626 1479 aa17.4■□□□□ 0.38
TTC39B-205ENST00000506891 NEUROD1Q13562 356 aa17.4■□□□□ 0.38
TTC39B-205ENST00000506891 SBNO1A3KN83 1393 aa17.4■□□□□ 0.38
TTC39B-205ENST00000506891 RBM6P78332 1123 aaKnown RBP17.39■□□□□ 0.37
TTC39B-205ENST00000506891 PMFBP1Q8TBY8 1022 aa17.39■□□□□ 0.37
TTC39B-205ENST00000506891 CLSPNQ9HAW4 1339 aa17.39■□□□□ 0.37
TTC39B-205ENST00000506891 KIF1AQ12756 1690 aa17.39■□□□□ 0.37
TTC39B-205ENST00000506891 USP21Q9UK80 565 aa17.38■□□□□ 0.37
TTC39B-205ENST00000506891 NUDT16Q96DE0 195 aaKnown RBP17.37■□□□□ 0.37
TTC39B-205ENST00000506891 CDK19Q9BWU1 502 aa17.37■□□□□ 0.37
TTC39B-205ENST00000506891 TRPC5Q9UL62 973 aaPredicted RBP17.37■□□□□ 0.37
TTC39B-205ENST00000506891 ARHGEF28Q8N1W1 1705 aaKnown RBP17.36■□□□□ 0.37
TTC39B-205ENST00000506891 NGDNQ8NEJ9 315 aaKnown RBP17.36■□□□□ 0.37
TTC39B-205ENST00000506891 PRR36Q9H6K5 1346 aa17.36■□□□□ 0.37
TTC39B-205ENST00000506891 GPRASP1Q5JY77 1395 aa17.36■□□□□ 0.37
TTC39B-205ENST00000506891 CCDC61Q9Y6R9 512 aa17.35■□□□□ 0.37
TTC39B-205ENST00000506891 ARHGEF10O15013 1369 aa17.34■□□□□ 0.37
TTC39B-205ENST00000506891 TULP4Q9NRJ4 1543 aa17.33■□□□□ 0.37
TTC39B-205ENST00000506891 TONSLQ96HA7 1378 aa17.33■□□□□ 0.36
TTC39B-205ENST00000506891 TIMELESSQ9UNS1 1208 aa17.33■□□□□ 0.36
TTC39B-205ENST00000506891 CDK12Q9NYV4 1490 aaPredicted RBP17.32■□□□□ 0.36
TTC39B-205ENST00000506891 CENPJQ9HC77 1338 aaPredicted RBP17.32■□□□□ 0.36
TTC39B-205ENST00000506891 PLEKHG3A1L390 1219 aa17.32■□□□□ 0.36
TTC39B-205ENST00000506891 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
TTC39B-205ENST00000506891 LMOD2Q6P5Q4 547 aa17.32■□□□□ 0.36
TTC39B-205ENST00000506891 TRPM1Q7Z4N2 1603 aa17.32■□□□□ 0.36
TTC39B-205ENST00000506891 TNS3Q68CZ2 1445 aa17.31■□□□□ 0.36
TTC39B-205ENST00000506891 UNC5CLQ8IV45 518 aa17.3■□□□□ 0.36
TTC39B-205ENST00000506891 COL22A1Q8NFW1 1626 aaPredicted RBP17.29■□□□□ 0.36
TTC39B-205ENST00000506891 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
TTC39B-205ENST00000506891 ROCK2O75116 1388 aaKnown RBP17.28■□□□□ 0.36
TTC39B-205ENST00000506891 CABLES1Q8TDN4 633 aa17.28■□□□□ 0.36
TTC39B-205ENST00000506891 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.36
TTC39B-205ENST00000506891 SRPK2P78362 688 aaKnown RBP17.27■□□□□ 0.36
TTC39B-205ENST00000506891 GJD4Q96KN9 370 aaPredicted RBP17.27■□□□□ 0.36
TTC39B-205ENST00000506891 ITSN1Q15811 1721 aa17.27■□□□□ 0.35
TTC39B-205ENST00000506891 BCL9LQ86UU0 1499 aa17.26■□□□□ 0.35
TTC39B-205ENST00000506891 USP32Q8NFA0 1604 aa17.26■□□□□ 0.35
TTC39B-205ENST00000506891 UPF1Q92900 1129 aaKnown RBP eCLIP17.26■□□□□ 0.35
TTC39B-205ENST00000506891 SBNO2Q9Y2G9 1366 aa17.26■□□□□ 0.35
TTC39B-205ENST00000506891 RALGAPBQ86X10 1494 aa17.25■□□□□ 0.35
TTC39B-205ENST00000506891 ACEP12821 1306 aa17.25■□□□□ 0.35
TTC39B-205ENST00000506891 ATRNO75882 1429 aa17.25■□□□□ 0.35
TTC39B-205ENST00000506891 FAM83GA6ND36 823 aa17.25■□□□□ 0.35
TTC39B-205ENST00000506891 SLC24A1O60721 1099 aa17.25■□□□□ 0.35
TTC39B-205ENST00000506891 EVC2Q86UK5 1308 aa17.24■□□□□ 0.35
TTC39B-205ENST00000506891 CABP2Q9NPB3 220 aa17.24■□□□□ 0.35
TTC39B-205ENST00000506891 RGPD8O14715 1765 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms