RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 GIGYF2Q6Y7W6 1299 aaKnown RBP8.52□□□□□ -1.05
CLDND1-212ENST00000506885 FMNL1O95466 1100 aaPredicted RBP8.51□□□□□ -1.05
CLDND1-212ENST00000506885 ADH1BP00325 375 aa8.51□□□□□ -1.05
CLDND1-212ENST00000506885 PDE4DQ08499 809 aa8.51□□□□□ -1.05
CLDND1-212ENST00000506885 PARP9Q8IXQ6 854 aa8.5□□□□□ -1.05
CLDND1-212ENST00000506885 REPIN1Q9BWE0 567 aaKnown RBP8.5□□□□□ -1.05
CLDND1-212ENST00000506885 ZMYND15Q9H091 742 aa8.5□□□□□ -1.05
CLDND1-212ENST00000506885 RSPH6AQ9H0K4 717 aa8.5□□□□□ -1.05
CLDND1-212ENST00000506885 SPSB2Q99619 263 aa8.49□□□□□ -1.05
CLDND1-212ENST00000506885 SLC27A5Q9Y2P5 690 aa8.49□□□□□ -1.05
CLDND1-212ENST00000506885 HOXA2O43364 376 aa8.47□□□□□ -1.05
CLDND1-212ENST00000506885 BEGAINQ9BUH8 593 aa8.47□□□□□ -1.05
CLDND1-212ENST00000506885 SLC6A16Q9GZN6 736 aa8.47□□□□□ -1.05
CLDND1-212ENST00000506885 BRICD5Q6PL45 260 aa8.46□□□□□ -1.06
CLDND1-212ENST00000506885 TLL1O43897 1013 aa8.45□□□□□ -1.06
CLDND1-212ENST00000506885 INSM1Q01101 510 aaPredicted RBP8.45□□□□□ -1.06
CLDND1-212ENST00000506885 THAP11Q96EK4 314 aa8.45□□□□□ -1.06
CLDND1-212ENST00000506885 GJA5P36382 358 aa8.44□□□□□ -1.06
CLDND1-212ENST00000506885 ANKLE1Q8NAG6 615 aa8.44□□□□□ -1.06
CLDND1-212ENST00000506885 SPIRE2Q8WWL2 714 aa8.44□□□□□ -1.06
CLDND1-212ENST00000506885 S1PR4O95977 384 aa8.43□□□□□ -1.06
CLDND1-212ENST00000506885 MSS51Q4VC12 460 aa8.43□□□□□ -1.06
CLDND1-212ENST00000506885 LCE2AQ5TA79 106 aaPredicted RBP8.43□□□□□ -1.06
CLDND1-212ENST00000506885 ARID3AQ99856 593 aa8.43□□□□□ -1.06
CLDND1-212ENST00000506885 RNF223E7ERA6 249 aa8.42□□□□□ -1.06
CLDND1-212ENST00000506885 FDX1P10109 184 aa8.42□□□□□ -1.06
CLDND1-212ENST00000506885 MS4A1P11836 297 aa8.42□□□□□ -1.06
CLDND1-212ENST00000506885 USB1Q9BQ65 265 aaKnown RBP8.42□□□□□ -1.06
CLDND1-212ENST00000506885 SPDYE5A6NIY4 337 aa8.4□□□□□ -1.06
CLDND1-212ENST00000506885 SLC19A1P41440 591 aa8.4□□□□□ -1.06
CLDND1-212ENST00000506885 TBC1D2Q9BYX2 928 aa8.4□□□□□ -1.06
CLDND1-212ENST00000506885 PKDCCQ504Y2 493 aa8.39□□□□□ -1.07
CLDND1-212ENST00000506885 RNF19BQ6ZMZ0 732 aa8.39□□□□□ -1.07
CLDND1-212ENST00000506885 TRIM67Q6ZTA4 783 aa8.39□□□□□ -1.07
CLDND1-212ENST00000506885 FAM160A2Q8N612 972 aaPredicted RBP8.39□□□□□ -1.07
CLDND1-212ENST00000506885 CCDC9Q9Y3X0 531 aaKnown RBP8.39□□□□□ -1.07
CLDND1-212ENST00000506885 MOXD2PA6NHM9 499 aa8.38□□□□□ -1.07
CLDND1-212ENST00000506885 RETREG3Q86VR2 466 aa8.38□□□□□ -1.07
CLDND1-212ENST00000506885 DDRGK1Q96HY6 314 aa8.38□□□□□ -1.07
CLDND1-212ENST00000506885 ZBTB7CA1YPR0 619 aa8.37□□□□□ -1.07
CLDND1-212ENST00000506885 POTECB2RU33 542 aa8.36□□□□□ -1.07
CLDND1-212ENST00000506885 C6orf229H3BNL8 230 aa8.36□□□□□ -1.07
CLDND1-212ENST00000506885 SPTLC1O15269 473 aa8.36□□□□□ -1.07
CLDND1-212ENST00000506885 WFS1O76024 890 aa8.36□□□□□ -1.07
CLDND1-212ENST00000506885 MMP16P51512 607 aa8.36□□□□□ -1.07
CLDND1-212ENST00000506885 RSBN1LQ6PCB5 846 aaPredicted RBP8.36□□□□□ -1.07
CLDND1-212ENST00000506885 HLA-CQ95604 372 aa8.36□□□□□ -1.07
CLDND1-212ENST00000506885 EMID1Q96A84 441 aaPredicted RBP8.36□□□□□ -1.07
CLDND1-212ENST00000506885 KDM4CQ9H3R0 1056 aa8.36□□□□□ -1.07
CLDND1-212ENST00000506885 NDUFV2P19404 249 aa8.35□□□□□ -1.07
CLDND1-212ENST00000506885 MYT1Q01538 1121 aa8.35□□□□□ -1.07
CLDND1-212ENST00000506885 GUCA2AQ02747 115 aa8.35□□□□□ -1.07
CLDND1-212ENST00000506885 MTMR2Q13614 643 aa8.35□□□□□ -1.07
CLDND1-212ENST00000506885 TUSC1Q2TAM9 212 aa8.35□□□□□ -1.07
CLDND1-212ENST00000506885 PRPF38BQ5VTL8 546 aaKnown RBP8.35□□□□□ -1.07
CLDND1-212ENST00000506885 RIC3Q7Z5B4 369 aa8.35□□□□□ -1.07
CLDND1-212ENST00000506885 C1orf115Q9H7X2 142 aa8.35□□□□□ -1.07
CLDND1-212ENST00000506885 PPEF1O14829 653 aaPredicted RBP8.34□□□□□ -1.07
CLDND1-212ENST00000506885 DXOO77932 396 aaKnown RBP8.34□□□□□ -1.07
CLDND1-212ENST00000506885 RPIAP49247 311 aa8.34□□□□□ -1.07
CLDND1-212ENST00000506885 SUZ12Q15022 739 aaKnown RBP8.34□□□□□ -1.07
CLDND1-212ENST00000506885 SPRYD7Q5W111 196 aa8.34□□□□□ -1.07
CLDND1-212ENST00000506885 PCDHGC3Q9UN70 934 aa8.34□□□□□ -1.07
CLDND1-212ENST00000506885 ZBTB24O43167 697 aaPredicted RBP8.33□□□□□ -1.08
CLDND1-212ENST00000506885 DGAT1O75907 488 aa8.33□□□□□ -1.08
CLDND1-212ENST00000506885 CD2BP2O95400 341 aaKnown RBP8.33□□□□□ -1.08
CLDND1-212ENST00000506885 JUNDP17535 347 aa8.33□□□□□ -1.08
CLDND1-212ENST00000506885 ZNF598Q86UK7 904 aaKnown RBP8.33□□□□□ -1.08
CLDND1-212ENST00000506885 ZBTB3Q9H5J0 574 aa8.33□□□□□ -1.08
CLDND1-212ENST00000506885 GPBP1L1Q9HC44 474 aaPredicted RBP8.33□□□□□ -1.08
CLDND1-212ENST00000506885 FCF1Q9Y324 198 aaKnown RBP8.33□□□□□ -1.08
CLDND1-212ENST00000506885 FAM187AA6NFU0 413 aa8.32□□□□□ -1.08
CLDND1-212ENST00000506885 PDIA4P13667 645 aaKnown RBP8.32□□□□□ -1.08
CLDND1-212ENST00000506885 ZNF697Q5TEC3 545 aa8.32□□□□□ -1.08
CLDND1-212ENST00000506885 MYSM1Q5VVJ2 828 aa8.32□□□□□ -1.08
CLDND1-212ENST00000506885 DESI1Q6ICB0 168 aa8.32□□□□□ -1.08
CLDND1-212ENST00000506885 TNFRSF10AO00220 468 aa8.31□□□□□ -1.08
CLDND1-212ENST00000506885 WIPF1O43516 503 aa8.31□□□□□ -1.08
CLDND1-212ENST00000506885 PRR20EP86478 221 aa8.31□□□□□ -1.08
CLDND1-212ENST00000506885 PRR20CP86479 221 aa8.31□□□□□ -1.08
CLDND1-212ENST00000506885 PRR20DP86480 221 aa8.31□□□□□ -1.08
CLDND1-212ENST00000506885 PRR20BP86481 221 aa8.31□□□□□ -1.08
CLDND1-212ENST00000506885 PRR20AP86496 221 aa8.31□□□□□ -1.08
CLDND1-212ENST00000506885 SYMPKQ92797 1274 aaKnown RBP8.31□□□□□ -1.08
CLDND1-212ENST00000506885 PRDM9Q9NQV7 894 aa8.31□□□□□ -1.08
CLDND1-212ENST00000506885 FAM181BA6NEQ2 426 aa8.3□□□□□ -1.08
CLDND1-212ENST00000506885 LIAT1Q6ZQX7 453 aa8.3□□□□□ -1.08
CLDND1-212ENST00000506885 CLK2P49760 499 aaKnown RBP8.29□□□□□ -1.08
CLDND1-212ENST00000506885 SKIV2LQ15477 1246 aaKnown RBP8.29□□□□□ -1.08
CLDND1-212ENST00000506885 PRR7Q8TB68 274 aa8.29□□□□□ -1.08
CLDND1-212ENST00000506885 NUTM2BA6NNL0 878 aaPredicted RBP8.28□□□□□ -1.08
CLDND1-212ENST00000506885 NUTM2EB1AL46 878 aaPredicted RBP8.28□□□□□ -1.08
CLDND1-212ENST00000506885 SH3D19Q5HYK7 790 aa8.28□□□□□ -1.08
CLDND1-212ENST00000506885 NUTM2DQ5VT03 806 aaPredicted RBP8.28□□□□□ -1.08
CLDND1-212ENST00000506885 NUTM2AQ8IVF1 878 aaPredicted RBP8.28□□□□□ -1.08
CLDND1-212ENST00000506885 IL27Q8NEV9 243 aa8.28□□□□□ -1.08
CLDND1-212ENST00000506885 FAM117AQ9C073 453 aa8.28□□□□□ -1.08
CLDND1-212ENST00000506885 PTPRNQ16849 979 aa8.27□□□□□ -1.09
CLDND1-212ENST00000506885 PLA2G2CQ5R387 149 aa8.27□□□□□ -1.09
CLDND1-212ENST00000506885 CCDC24Q8N4L8 307 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms