RNA–Protein interactions for RNA: ENST00000506747.5

CLOCK-205, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 1,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-205ENST00000506747 SMCPP49901 116 aaPredicted RBP8.96□□□□□ -0.98
CLOCK-205ENST00000506747 MAP2K5Q13163 448 aa8.96□□□□□ -0.98
CLOCK-205ENST00000506747 CYP4X1Q8N118 509 aa8.96□□□□□ -0.98
CLOCK-205ENST00000506747 DAXXQ9UER7 740 aaPredicted RBP8.95□□□□□ -0.98
CLOCK-205ENST00000506747 RDH13Q8NBN7 331 aa8.94□□□□□ -0.98
CLOCK-205ENST00000506747 NLRP7Q8WX94 980 aa8.94□□□□□ -0.98
CLOCK-205ENST00000506747 TMEM132AQ24JP5 1023 aa8.93□□□□□ -0.98
CLOCK-205ENST00000506747 PUS10Q3MIT2 529 aaKnown RBP8.93□□□□□ -0.98
CLOCK-205ENST00000506747 DDX11L8A8MPP1 907 aa8.92□□□□□ -0.98
CLOCK-205ENST00000506747 IRF6O14896 467 aa8.92□□□□□ -0.98
CLOCK-205ENST00000506747 SULF1Q8IWU6 871 aa8.92□□□□□ -0.98
CLOCK-205ENST00000506747 PHOX2BQ99453 314 aa8.92□□□□□ -0.98
CLOCK-205ENST00000506747 MINK1Q8N4C8 1332 aaPredicted RBP8.92□□□□□ -0.98
CLOCK-205ENST00000506747 AK7Q96M32 723 aa8.91□□□□□ -0.98
CLOCK-205ENST00000506747 FCF1Q9Y324 198 aaKnown RBP8.91□□□□□ -0.98
CLOCK-205ENST00000506747 TRIM66O15016 1216 aa8.89□□□□□ -0.99
CLOCK-205ENST00000506747 CCDC102AQ96A19 550 aa8.88□□□□□ -0.99
CLOCK-205ENST00000506747 TTC24A2A3L6 582 aaPredicted RBP8.87□□□□□ -0.99
CLOCK-205ENST00000506747 LCE2CQ5TA81 110 aa8.87□□□□□ -0.99
CLOCK-205ENST00000506747 KRI1Q8N9T8 703 aaKnown RBP8.87□□□□□ -0.99
CLOCK-205ENST00000506747 THAP11Q96EK4 314 aa8.87□□□□□ -0.99
CLOCK-205ENST00000506747 MORN1Q5T089 497 aa8.86□□□□□ -0.99
CLOCK-205ENST00000506747 TERTO14746 1132 aaKnown RBP8.85□□□□□ -0.99
CLOCK-205ENST00000506747 MDM2Q00987 491 aaPredicted RBP8.85□□□□□ -0.99
CLOCK-205ENST00000506747 ATP13A2Q9NQ11 1180 aa8.85□□□□□ -0.99
CLOCK-205ENST00000506747 FAM181BA6NEQ2 426 aa8.84□□□□□ -0.99
CLOCK-205ENST00000506747 ZBTB24O43167 697 aaPredicted RBP8.84□□□□□ -0.99
CLOCK-205ENST00000506747 FMNL1O95466 1100 aaPredicted RBP8.84□□□□□ -0.99
CLOCK-205ENST00000506747 GCGRP47871 477 aa8.84□□□□□ -0.99
CLOCK-205ENST00000506747 FAM160A2Q8N612 972 aaPredicted RBP8.84□□□□□ -0.99
CLOCK-205ENST00000506747 SENP2Q9HC62 589 aa8.84□□□□□ -0.99
CLOCK-205ENST00000506747 SNRPBP14678 240 aaKnown RBP8.83□□□□□ -1
CLOCK-205ENST00000506747 NEUROD2Q15784 382 aa8.83□□□□□ -1
CLOCK-205ENST00000506747 SNIP1Q8TAD8 396 aaKnown RBP8.83□□□□□ -1
CLOCK-205ENST00000506747 TRIM47Q96LD4 638 aa8.83□□□□□ -1
CLOCK-205ENST00000506747 SALL2Q9Y467 1007 aaPredicted RBP8.83□□□□□ -1
CLOCK-205ENST00000506747 WNT7AO00755 349 aa8.82□□□□□ -1
CLOCK-205ENST00000506747 SMPD1P17405 629 aa8.82□□□□□ -1
CLOCK-205ENST00000506747 ATP6V1AP38606 617 aa8.82□□□□□ -1
CLOCK-205ENST00000506747 PDE4DQ08499 809 aa8.82□□□□□ -1
CLOCK-205ENST00000506747 FUT2Q10981 343 aa8.82□□□□□ -1
CLOCK-205ENST00000506747 CLCN1P35523 988 aa8.81□□□□□ -1
CLOCK-205ENST00000506747 GPBP1L1Q9HC44 474 aaPredicted RBP8.81□□□□□ -1
CLOCK-205ENST00000506747 CD46P15529 392 aa8.8□□□□□ -1
CLOCK-205ENST00000506747 AMHR2Q16671 573 aa8.8□□□□□ -1
CLOCK-205ENST00000506747 GRIPAP1Q4V328 841 aa8.8□□□□□ -1
CLOCK-205ENST00000506747 GPCPD1Q9NPB8 672 aa8.8□□□□□ -1
CLOCK-205ENST00000506747 SLC27A5Q9Y2P5 690 aa8.8□□□□□ -1
CLOCK-205ENST00000506747 KIFC2Q96AC6 838 aa8.8□□□□□ -1
CLOCK-205ENST00000506747 MSS51Q4VC12 460 aa8.79□□□□□ -1
CLOCK-205ENST00000506747 BRICD5Q6PL45 260 aa8.79□□□□□ -1
CLOCK-205ENST00000506747 KDM4CQ9H3R0 1056 aa8.79□□□□□ -1
CLOCK-205ENST00000506747 PRDM9Q9NQV7 894 aa8.79□□□□□ -1
CLOCK-205ENST00000506747 GTF3C3Q9Y5Q9 886 aa8.78□□□□□ -1
CLOCK-205ENST00000506747 J3QL48 77 aa8.76□□□□□ -1.01
CLOCK-205ENST00000506747 KDM4AO75164 1064 aa8.76□□□□□ -1.01
CLOCK-205ENST00000506747 TRIM32Q13049 653 aa8.76□□□□□ -1.01
CLOCK-205ENST00000506747 TTLL12Q14166 644 aaPredicted RBP8.76□□□□□ -1.01
CLOCK-205ENST00000506747 MRGPRX2Q96LB1 330 aa8.76□□□□□ -1.01
CLOCK-205ENST00000506747 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
CLOCK-205ENST00000506747 PARP9Q8IXQ6 854 aa8.75□□□□□ -1.01
CLOCK-205ENST00000506747 SLC16A10Q8TF71 515 aa8.75□□□□□ -1.01
CLOCK-205ENST00000506747 USP46P62068 366 aa8.74□□□□□ -1.01
CLOCK-205ENST00000506747 REPIN1Q9BWE0 567 aaKnown RBP8.74□□□□□ -1.01
CLOCK-205ENST00000506747 Q3C1V9 767 aa8.73□□□□□ -1.01
CLOCK-205ENST00000506747 HPS1Q92902 700 aa8.73□□□□□ -1.01
CLOCK-205ENST00000506747 MMP16P51512 607 aa8.72□□□□□ -1.01
CLOCK-205ENST00000506747 NUTM1Q86Y26 1132 aa8.72□□□□□ -1.01
CLOCK-205ENST00000506747 PLEKHG3A1L390 1219 aa8.71□□□□□ -1.02
CLOCK-205ENST00000506747 SSTR3P32745 418 aaPredicted RBP8.71□□□□□ -1.02
CLOCK-205ENST00000506747 RNF19BQ6ZMZ0 732 aa8.71□□□□□ -1.02
CLOCK-205ENST00000506747 ZSCAN1Q8NBB4 408 aa8.7□□□□□ -1.02
CLOCK-205ENST00000506747 FAM117AQ9C073 453 aa8.7□□□□□ -1.02
CLOCK-205ENST00000506747 NXF1Q9UBU9 619 aaKnown RBP8.7□□□□□ -1.02
CLOCK-205ENST00000506747 HOXA2O43364 376 aa8.69□□□□□ -1.02
CLOCK-205ENST00000506747 GIGYF2Q6Y7W6 1299 aaKnown RBP8.69□□□□□ -1.02
CLOCK-205ENST00000506747 NPAS3Q8IXF0 933 aa8.69□□□□□ -1.02
CLOCK-205ENST00000506747 IL27Q8NEV9 243 aa8.68□□□□□ -1.02
CLOCK-205ENST00000506747 LORP23490 312 aaPredicted RBP8.67□□□□□ -1.02
CLOCK-205ENST00000506747 GMPRP36959 345 aa8.67□□□□□ -1.02
CLOCK-205ENST00000506747 RC3H1Q5TC82 1133 aaKnown RBP8.67□□□□□ -1.02
CLOCK-205ENST00000506747 IRF7Q92985 503 aa8.67□□□□□ -1.02
CLOCK-205ENST00000506747 HLA-CQ95604 372 aa8.67□□□□□ -1.02
CLOCK-205ENST00000506747 TIMELESSQ9UNS1 1208 aa8.67□□□□□ -1.02
CLOCK-205ENST00000506747 MS4A1P11836 297 aa8.66□□□□□ -1.02
CLOCK-205ENST00000506747 DXOO77932 396 aaKnown RBP8.65□□□□□ -1.02
CLOCK-205ENST00000506747 WNT7BP56706 349 aa8.65□□□□□ -1.02
CLOCK-205ENST00000506747 KCTD17Q8N5Z5 321 aa8.65□□□□□ -1.02
CLOCK-205ENST00000506747 USB1Q9BQ65 265 aaKnown RBP8.65□□□□□ -1.02
CLOCK-205ENST00000506747 GUCA2AQ02747 115 aa8.64□□□□□ -1.03
CLOCK-205ENST00000506747 SKOR1P84550 965 aa8.63□□□□□ -1.03
CLOCK-205ENST00000506747 SPIRE2Q8WWL2 714 aa8.63□□□□□ -1.03
CLOCK-205ENST00000506747 BEGAINQ9BUH8 593 aa8.63□□□□□ -1.03
CLOCK-205ENST00000506747 FDX1P10109 184 aa8.62□□□□□ -1.03
CLOCK-205ENST00000506747 DDRGK1Q96HY6 314 aa8.62□□□□□ -1.03
CLOCK-205ENST00000506747 ALDH1A1P00352 501 aa8.61□□□□□ -1.03
CLOCK-205ENST00000506747 CCDC24Q8N4L8 307 aa8.61□□□□□ -1.03
CLOCK-205ENST00000506747 H3BM21 787 aa8.6□□□□□ -1.03
CLOCK-205ENST00000506747 C6orf229H3BNL8 230 aa8.6□□□□□ -1.03
CLOCK-205ENST00000506747 GOPCQ9HD26 462 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms