RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 DLC1Q96QB1 1528 aa25.76■■□□□ 1.71
SMN1-204ENST00000506163 SAFB2Q14151 953 aaKnown RBP eCLIP25.75■■□□□ 1.71
SMN1-204ENST00000506163 C1orf167Q5SNV9 1468 aa25.75■■□□□ 1.71
SMN1-204ENST00000506163 NBPF8Q3BBV2 869 aa25.71■■□□□ 1.71
SMN1-204ENST00000506163 ORAI2Q96SN7 254 aa25.71■■□□□ 1.71
SMN1-204ENST00000506163 KIAA1210Q9ULL0 1709 aa25.71■■□□□ 1.71
SMN1-204ENST00000506163 CDC42BPGQ6DT37 1551 aa25.71■■□□□ 1.71
SMN1-204ENST00000506163 DDX17Q92841 729 aaKnown RBP25.7■■□□□ 1.7
SMN1-204ENST00000506163 POGKQ9P215 609 aa25.7■■□□□ 1.7
SMN1-204ENST00000506163 NUTM2FA1L443 756 aa25.69■■□□□ 1.7
SMN1-204ENST00000506163 PHLPP1O60346 1717 aa25.67■■□□□ 1.7
SMN1-204ENST00000506163 AHDC1Q5TGY3 1603 aaPredicted RBP25.67■■□□□ 1.7
SMN1-204ENST00000506163 HIRIP3Q9BW71 556 aaPredicted RBP25.65■■□□□ 1.7
SMN1-204ENST00000506163 COL16A1Q07092 1604 aaPredicted RBP25.65■■□□□ 1.7
SMN1-204ENST00000506163 MINK1Q8N4C8 1332 aaPredicted RBP25.64■■□□□ 1.7
SMN1-204ENST00000506163 ARHGEF28Q8N1W1 1705 aaKnown RBP25.64■■□□□ 1.7
SMN1-204ENST00000506163 TONSLQ96HA7 1378 aa25.64■■□□□ 1.69
SMN1-204ENST00000506163 TRPM1Q7Z4N2 1603 aa25.62■■□□□ 1.69
SMN1-204ENST00000506163 ESCO1Q5FWF5 840 aa25.62■■□□□ 1.69
SMN1-204ENST00000506163 FMN2Q9NZ56 1722 aa25.61■■□□□ 1.69
SMN1-204ENST00000506163 NHSL1Q5SYE7 1610 aa25.6■■□□□ 1.69
SMN1-204ENST00000506163 ADGRB2O60241 1585 aa25.58■■□□□ 1.68
SMN1-204ENST00000506163 JCADQ9P266 1359 aa25.56■■□□□ 1.68
SMN1-204ENST00000506163 MED1Q15648 1581 aaPredicted RBP25.56■■□□□ 1.68
SMN1-204ENST00000506163 RGPD8O14715 1765 aaPredicted RBP25.56■■□□□ 1.68
SMN1-204ENST00000506163 WASLO00401 505 aaPredicted RBP25.55■■□□□ 1.68
SMN1-204ENST00000506163 ROCK2O75116 1388 aaKnown RBP25.55■■□□□ 1.68
SMN1-204ENST00000506163 DISP3Q9P2K9 1392 aa25.55■■□□□ 1.68
SMN1-204ENST00000506163 SOS2Q07890 1332 aaPredicted RBP25.55■■□□□ 1.68
SMN1-204ENST00000506163 PRR36Q9H6K5 1346 aa25.55■■□□□ 1.68
SMN1-204ENST00000506163 FOXO3O43524 673 aa25.54■■□□□ 1.68
SMN1-204ENST00000506163 USP32Q8NFA0 1604 aa25.53■■□□□ 1.68
SMN1-204ENST00000506163 GPRASP1Q5JY77 1395 aa25.53■■□□□ 1.68
SMN1-204ENST00000506163 CLSPNQ9HAW4 1339 aa25.53■■□□□ 1.68
SMN1-204ENST00000506163 XPCQ01831 940 aaPredicted RBP25.51■■□□□ 1.67
SMN1-204ENST00000506163 CENPJQ9HC77 1338 aaPredicted RBP25.5■■□□□ 1.67
SMN1-204ENST00000506163 LRRC59Q96AG4 307 aaKnown RBP25.5■■□□□ 1.67
SMN1-204ENST00000506163 PHF8Q9UPP1 1060 aa25.49■■□□□ 1.67
SMN1-204ENST00000506163 CCER1Q8TC90 406 aaPredicted RBP25.48■■□□□ 1.67
SMN1-204ENST00000506163 CDK19Q9BWU1 502 aa25.48■■□□□ 1.67
SMN1-204ENST00000506163 ANKARQ7Z5J8 1434 aa25.48■■□□□ 1.67
SMN1-204ENST00000506163 PXDNQ92626 1479 aa25.48■■□□□ 1.67
SMN1-204ENST00000506163 RALGAPBQ86X10 1494 aa25.47■■□□□ 1.67
SMN1-204ENST00000506163 NPHP3Q7Z494 1330 aa25.47■■□□□ 1.67
SMN1-204ENST00000506163 TULP4Q9NRJ4 1543 aa25.46■■□□□ 1.67
SMN1-204ENST00000506163 SHPRHQ149N8 1683 aa25.46■■□□□ 1.67
SMN1-204ENST00000506163 PMFBP1Q8TBY8 1022 aa25.46■■□□□ 1.67
SMN1-204ENST00000506163 PNPLA6Q8IY17 1366 aa25.45■■□□□ 1.67
SMN1-204ENST00000506163 LRP6O75581 1613 aa25.45■■□□□ 1.66
SMN1-204ENST00000506163 CARD11Q9BXL7 1154 aa25.45■■□□□ 1.66
SMN1-204ENST00000506163 NUDT16Q96DE0 195 aaKnown RBP25.44■■□□□ 1.66
SMN1-204ENST00000506163 SPATA31A6Q5VVP1 1343 aa25.43■■□□□ 1.66
SMN1-204ENST00000506163 RGS17Q9UGC6 210 aaPredicted RBP25.43■■□□□ 1.66
SMN1-204ENST00000506163 ATP7BP35670 1465 aa25.42■■□□□ 1.66
SMN1-204ENST00000506163 KRT28Q7Z3Y7 464 aa25.42■■□□□ 1.66
SMN1-204ENST00000506163 KIF1AQ12756 1690 aa25.42■■□□□ 1.66
SMN1-204ENST00000506163 QRICH2Q9H0J4 1663 aa25.42■■□□□ 1.66
SMN1-204ENST00000506163 EIF3AQ14152 1382 aaKnown RBP25.4■■□□□ 1.66
SMN1-204ENST00000506163 ILDR2Q71H61 639 aa25.4■■□□□ 1.66
SMN1-204ENST00000506163 TIMELESSQ9UNS1 1208 aa25.4■■□□□ 1.66
SMN1-204ENST00000506163 NUTM2BA6NNL0 878 aaPredicted RBP25.39■■□□□ 1.66
SMN1-204ENST00000506163 NUTM2EB1AL46 878 aaPredicted RBP25.39■■□□□ 1.66
SMN1-204ENST00000506163 NUTM2AQ8IVF1 878 aaPredicted RBP25.39■■□□□ 1.66
SMN1-204ENST00000506163 CABP2Q9NPB3 220 aa25.38■■□□□ 1.65
SMN1-204ENST00000506163 PSME1Q06323 249 aa25.36■■□□□ 1.65
SMN1-204ENST00000506163 PHF23Q9BUL5 403 aaPredicted RBP25.36■■□□□ 1.65
SMN1-204ENST00000506163 SPATA31A3Q5VYP0 1347 aa25.36■■□□□ 1.65
SMN1-204ENST00000506163 SRPK2P78362 688 aaKnown RBP25.35■■□□□ 1.65
SMN1-204ENST00000506163 CCDC61Q9Y6R9 512 aa25.35■■□□□ 1.65
SMN1-204ENST00000506163 PLEKHG3A1L390 1219 aa25.32■■□□□ 1.64
SMN1-204ENST00000506163 TOPAZ1Q8N9V7 1692 aa25.32■■□□□ 1.64
SMN1-204ENST00000506163 NGDNQ8NEJ9 315 aaKnown RBP25.31■■□□□ 1.64
SMN1-204ENST00000506163 SBNO1A3KN83 1393 aa25.3■■□□□ 1.64
SMN1-204ENST00000506163 EVC2Q86UK5 1308 aa25.3■■□□□ 1.64
SMN1-204ENST00000506163 COL22A1Q8NFW1 1626 aaPredicted RBP25.3■■□□□ 1.64
SMN1-204ENST00000506163 SBNO2Q9Y2G9 1366 aa25.29■■□□□ 1.64
SMN1-204ENST00000506163 MEX3CQ5U5Q3 659 aaKnown RBP25.29■■□□□ 1.64
SMN1-204ENST00000506163 ITSN1Q15811 1721 aa25.28■■□□□ 1.64
SMN1-204ENST00000506163 TNS3Q68CZ2 1445 aa25.28■■□□□ 1.64
SMN1-204ENST00000506163 POLR3AO14802 1390 aaPredicted RBP25.28■■□□□ 1.64
SMN1-204ENST00000506163 ACEP12821 1306 aa25.28■■□□□ 1.64
SMN1-204ENST00000506163 ST20-MTHFSA0A0A6YYL1 179 aa25.28■■□□□ 1.64
SMN1-204ENST00000506163 POTEAQ6S8J7 498 aa25.28■■□□□ 1.64
SMN1-204ENST00000506163 TRPM3Q9HCF6 1732 aaPredicted RBP25.28■■□□□ 1.64
SMN1-204ENST00000506163 ADAMTS2O95450 1211 aa25.27■■□□□ 1.64
SMN1-204ENST00000506163 TESK2Q96S53 571 aa25.27■■□□□ 1.64
SMN1-204ENST00000506163 CABP1Q9NZU7 370 aa25.27■■□□□ 1.64
SMN1-204ENST00000506163 PPIP5K1Q6PFW1 1433 aa25.27■■□□□ 1.64
SMN1-204ENST00000506163 LMOD2Q6P5Q4 547 aa25.24■■□□□ 1.63
SMN1-204ENST00000506163 CABLES1Q8TDN4 633 aa25.24■■□□□ 1.63
SMN1-204ENST00000506163 C8orf37Q96NL8 207 aa25.22■■□□□ 1.63
SMN1-204ENST00000506163 PLEKHG5O94827 1062 aa25.21■■□□□ 1.63
SMN1-204ENST00000506163 USP47Q96K76 1375 aa25.21■■□□□ 1.63
SMN1-204ENST00000506163 ALS2Q96Q42 1657 aa25.21■■□□□ 1.63
SMN1-204ENST00000506163 ARHGEF10O15013 1369 aa25.2■■□□□ 1.62
SMN1-204ENST00000506163 PAK3O75914 559 aaPredicted RBP25.2■■□□□ 1.62
SMN1-204ENST00000506163 AFF2P51816 1311 aa25.19■■□□□ 1.62
SMN1-204ENST00000506163 NGLY1Q96IV0 654 aa25.16■■□□□ 1.62
SMN1-204ENST00000506163 ATAD2Q6PL18 1390 aa25.16■■□□□ 1.62
SMN1-204ENST00000506163 ZNF772Q68DY9 489 aaPredicted RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms