RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 ATAD2Q6PL18 1390 aa15.87■□□□□ 0.13
CPNE4-206ENST00000505957 NAIPQ13075 1403 aa15.86■□□□□ 0.13
CPNE4-206ENST00000505957 KIF1BO60333 1816 aa15.85■□□□□ 0.13
CPNE4-206ENST00000505957 FOXD1Q16676 465 aa15.84■□□□□ 0.13
CPNE4-206ENST00000505957 NPHP3Q7Z494 1330 aa15.84■□□□□ 0.13
CPNE4-206ENST00000505957 ATRNO75882 1429 aa15.84■□□□□ 0.13
CPNE4-206ENST00000505957 COL22A1Q8NFW1 1626 aaPredicted RBP15.83■□□□□ 0.12
CPNE4-206ENST00000505957 MYOM2P54296 1465 aa15.82■□□□□ 0.12
CPNE4-206ENST00000505957 ESCO1Q5FWF5 840 aa15.81■□□□□ 0.12
CPNE4-206ENST00000505957 CCDC125Q86Z20 511 aa15.81■□□□□ 0.12
CPNE4-206ENST00000505957 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
CPNE4-206ENST00000505957 CDC42BPGQ6DT37 1551 aa15.79■□□□□ 0.12
CPNE4-206ENST00000505957 BCL9LQ86UU0 1499 aa15.79■□□□□ 0.12
CPNE4-206ENST00000505957 LRPPRCP42704 1394 aaKnown RBP15.79■□□□□ 0.12
CPNE4-206ENST00000505957 PXDNQ92626 1479 aa15.78■□□□□ 0.12
CPNE4-206ENST00000505957 ZRANB1Q9UGI0 708 aa15.78■□□□□ 0.12
CPNE4-206ENST00000505957 TECPR2O15040 1411 aa15.77■□□□□ 0.12
CPNE4-206ENST00000505957 FOXO3O43524 673 aa15.77■□□□□ 0.12
CPNE4-206ENST00000505957 GJD4Q96KN9 370 aaPredicted RBP15.77■□□□□ 0.12
CPNE4-206ENST00000505957 PPLO60437 1756 aa15.76■□□□□ 0.11
CPNE4-206ENST00000505957 CLSPNQ9HAW4 1339 aa15.75■□□□□ 0.11
CPNE4-206ENST00000505957 ABCC11Q96J66 1382 aa15.75■□□□□ 0.11
CPNE4-206ENST00000505957 ADGRF5Q8IZF2 1346 aa15.74■□□□□ 0.11
CPNE4-206ENST00000505957 CCER1Q8TC90 406 aaPredicted RBP15.74■□□□□ 0.11
CPNE4-206ENST00000505957 ANKRD30BQ9BXX2 1392 aa15.74■□□□□ 0.11
CPNE4-206ENST00000505957 XPCQ01831 940 aaPredicted RBP15.73■□□□□ 0.11
CPNE4-206ENST00000505957 WAPLQ7Z5K2 1190 aa15.73■□□□□ 0.11
CPNE4-206ENST00000505957 UNC5CLQ8IV45 518 aa15.73■□□□□ 0.11
CPNE4-206ENST00000505957 SPATA31A3Q5VYP0 1347 aa15.71■□□□□ 0.11
CPNE4-206ENST00000505957 CCDC144AA2RUR9 1427 aa15.71■□□□□ 0.11
CPNE4-206ENST00000505957 SPATA31E1Q6ZUB1 1445 aa15.71■□□□□ 0.11
CPNE4-206ENST00000505957 SIRT1Q96EB6 747 aa15.71■□□□□ 0.11
CPNE4-206ENST00000505957 STK26Q9P289 416 aa15.71■□□□□ 0.11
CPNE4-206ENST00000505957 SLIT2O94813 1529 aa15.71■□□□□ 0.11
CPNE4-206ENST00000505957 SRCAPQ6ZRS2 3230 aa15.7■□□□□ 0.1
CPNE4-206ENST00000505957 MARF1Q9Y4F3 1742 aaKnown RBP15.69■□□□□ 0.1
CPNE4-206ENST00000505957 NUTM2FA1L443 756 aa15.69■□□□□ 0.1
CPNE4-206ENST00000505957 RGL3Q3MIN7 710 aa15.69■□□□□ 0.1
CPNE4-206ENST00000505957 DHX57Q6P158 1386 aaKnown RBP15.69■□□□□ 0.1
CPNE4-206ENST00000505957 RAB3GAP2Q9H2M9 1393 aa15.69■□□□□ 0.1
CPNE4-206ENST00000505957 PLEKHH1Q9ULM0 1364 aa15.69■□□□□ 0.1
CPNE4-206ENST00000505957 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.68■□□□□ 0.1
CPNE4-206ENST00000505957 RALGAPBQ86X10 1494 aa15.68■□□□□ 0.1
CPNE4-206ENST00000505957 TMEM132EQ6IEE7 984 aa15.68■□□□□ 0.1
CPNE4-206ENST00000505957 KRT28Q7Z3Y7 464 aa15.68■□□□□ 0.1
CPNE4-206ENST00000505957 PIK3C2GO75747 1445 aa15.68■□□□□ 0.1
CPNE4-206ENST00000505957 BLMP54132 1417 aaPredicted RBP15.68■□□□□ 0.1
CPNE4-206ENST00000505957 YTHDC2Q9H6S0 1430 aaKnown RBP15.67■□□□□ 0.1
CPNE4-206ENST00000505957 PSME1Q06323 249 aa15.66■□□□□ 0.1
CPNE4-206ENST00000505957 GLI3P10071 1580 aa15.66■□□□□ 0.1
CPNE4-206ENST00000505957 KNDC1Q76NI1 1749 aa15.65■□□□□ 0.1
CPNE4-206ENST00000505957 KIF1AQ12756 1690 aa15.65■□□□□ 0.1
CPNE4-206ENST00000505957 ONECUT3O60422 494 aaPredicted RBP15.65■□□□□ 0.1
CPNE4-206ENST00000505957 VPS72Q15906 364 aa15.65■□□□□ 0.1
CPNE4-206ENST00000505957 MPHOSPH9Q99550 1183 aa15.65■□□□□ 0.1
CPNE4-206ENST00000505957 IFT172Q9UG01 1749 aa15.65■□□□□ 0.1
CPNE4-206ENST00000505957 ACIN1Q9UKV3 1341 aaKnown RBP15.65■□□□□ 0.1
CPNE4-206ENST00000505957 EP400Q96L91 3159 aa15.65■□□□□ 0.1
CPNE4-206ENST00000505957 TNS3Q68CZ2 1445 aa15.64■□□□□ 0.09
CPNE4-206ENST00000505957 C14orf93Q9H972 538 aaKnown RBP15.64■□□□□ 0.09
CPNE4-206ENST00000505957 FMN2Q9NZ56 1722 aa15.64■□□□□ 0.09
CPNE4-206ENST00000505957 PHF8Q9UPP1 1060 aa15.64■□□□□ 0.09
CPNE4-206ENST00000505957 SBNO1A3KN83 1393 aa15.63■□□□□ 0.09
CPNE4-206ENST00000505957 SEPT12Q8IYM1 358 aa15.63■□□□□ 0.09
CPNE4-206ENST00000505957 USP32Q8NFA0 1604 aa15.63■□□□□ 0.09
CPNE4-206ENST00000505957 HAP1P54257 671 aaPredicted RBP15.62■□□□□ 0.09
CPNE4-206ENST00000505957 SF3B2Q13435 895 aaKnown RBP15.62■□□□□ 0.09
CPNE4-206ENST00000505957 ARHGEF10O15013 1369 aa15.61■□□□□ 0.09
CPNE4-206ENST00000505957 DEFB132Q7Z7B7 95 aa15.6■□□□□ 0.09
CPNE4-206ENST00000505957 NRXN1Q9ULB1 1477 aa15.59■□□□□ 0.09
CPNE4-206ENST00000505957 KRT27Q7Z3Y8 459 aa15.59■□□□□ 0.09
CPNE4-206ENST00000505957 CABLES1Q8TDN4 633 aa15.59■□□□□ 0.09
CPNE4-206ENST00000505957 CFAP70Q5T0N1 1121 aa15.57■□□□□ 0.08
CPNE4-206ENST00000505957 ANKARQ7Z5J8 1434 aa15.57■□□□□ 0.08
CPNE4-206ENST00000505957 NWD2Q9ULI1 1742 aa15.57■□□□□ 0.08
CPNE4-206ENST00000505957 FAM83GA6ND36 823 aa15.56■□□□□ 0.08
CPNE4-206ENST00000505957 PRAM1Q96QH2 718 aa15.56■□□□□ 0.08
CPNE4-206ENST00000505957 CCDC9Q9Y3X0 531 aaKnown RBP15.56■□□□□ 0.08
CPNE4-206ENST00000505957 LMOD2Q6P5Q4 547 aa15.55■□□□□ 0.08
CPNE4-206ENST00000505957 BRWD3Q6RI45 1802 aa15.54■□□□□ 0.08
CPNE4-206ENST00000505957 DLC1Q96QB1 1528 aa15.54■□□□□ 0.08
CPNE4-206ENST00000505957 BAG6P46379 1132 aa15.53■□□□□ 0.08
CPNE4-206ENST00000505957 SAFB2Q14151 953 aaKnown RBP eCLIP15.53■□□□□ 0.08
CPNE4-206ENST00000505957 PMFBP1Q8TBY8 1022 aa15.53■□□□□ 0.08
CPNE4-206ENST00000505957 POGKQ9P215 609 aa15.53■□□□□ 0.08
CPNE4-206ENST00000505957 PLCH1Q4KWH8 1693 aa15.53■□□□□ 0.08
CPNE4-206ENST00000505957 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
CPNE4-206ENST00000505957 BTG4Q9NY30 223 aa15.51■□□□□ 0.07
CPNE4-206ENST00000505957 RGPD8O14715 1765 aaPredicted RBP15.51■□□□□ 0.07
CPNE4-206ENST00000505957 LRP5O75197 1615 aa15.5■□□□□ 0.07
CPNE4-206ENST00000505957 EIF3AQ14152 1382 aaKnown RBP15.5■□□□□ 0.07
CPNE4-206ENST00000505957 GPRASP1Q5JY77 1395 aa15.5■□□□□ 0.07
CPNE4-206ENST00000505957 ADGRB2O60241 1585 aa15.5■□□□□ 0.07
CPNE4-206ENST00000505957 FAM98CQ17RN3 349 aaKnown RBP15.5■□□□□ 0.07
CPNE4-206ENST00000505957 ABCA3Q99758 1704 aa15.5■□□□□ 0.07
CPNE4-206ENST00000505957 A0A0G2JS52 829 aa15.49■□□□□ 0.07
CPNE4-206ENST00000505957 MYT1Q01538 1121 aa15.49■□□□□ 0.07
CPNE4-206ENST00000505957 SPATA31A5Q5VU36 1347 aa15.47■□□□□ 0.07
CPNE4-206ENST00000505957 SPATA31A7Q8IWB4 1347 aa15.47■□□□□ 0.07
CPNE4-206ENST00000505957 ADGRB1O14514 1584 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms