RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
KDM3B-203ENST00000505756 COL16A1Q07092 1604 aaPredicted RBP16.51■□□□□ 0.23
KDM3B-203ENST00000505756 SIN3AQ96ST3 1273 aa16.5■□□□□ 0.23
KDM3B-203ENST00000505756 PRAM1Q96QH2 718 aa16.48■□□□□ 0.23
KDM3B-203ENST00000505756 JCADQ9P266 1359 aa16.48■□□□□ 0.23
KDM3B-203ENST00000505756 NHSL1Q5SYE7 1610 aa16.48■□□□□ 0.23
KDM3B-203ENST00000505756 KIAA1210Q9ULL0 1709 aa16.48■□□□□ 0.23
KDM3B-203ENST00000505756 NEUROD1Q13562 356 aa16.47■□□□□ 0.23
KDM3B-203ENST00000505756 L3MBTL2Q969R5 705 aa16.47■□□□□ 0.23
KDM3B-203ENST00000505756 TRAK1Q9UPV9 953 aa16.47■□□□□ 0.23
KDM3B-203ENST00000505756 POGKQ9P215 609 aa16.46■□□□□ 0.23
KDM3B-203ENST00000505756 ORAI2Q96SN7 254 aa16.45■□□□□ 0.22
KDM3B-203ENST00000505756 FMN2Q9NZ56 1722 aa16.44■□□□□ 0.22
KDM3B-203ENST00000505756 SAFB2Q14151 953 aaKnown RBP eCLIP16.43■□□□□ 0.22
KDM3B-203ENST00000505756 ADGRB2O60241 1585 aa16.43■□□□□ 0.22
KDM3B-203ENST00000505756 ESCO1Q5FWF5 840 aa16.42■□□□□ 0.22
KDM3B-203ENST00000505756 SHPRHQ149N8 1683 aa16.42■□□□□ 0.22
KDM3B-203ENST00000505756 CLSPNQ9HAW4 1339 aa16.42■□□□□ 0.22
KDM3B-203ENST00000505756 DDX17Q92841 729 aaKnown RBP16.41■□□□□ 0.22
KDM3B-203ENST00000505756 LRRC59Q96AG4 307 aaKnown RBP16.41■□□□□ 0.22
KDM3B-203ENST00000505756 PHF23Q9BUL5 403 aaPredicted RBP16.41■□□□□ 0.22
KDM3B-203ENST00000505756 ARHGEF28Q8N1W1 1705 aaKnown RBP16.41■□□□□ 0.22
KDM3B-203ENST00000505756 SPATA31A6Q5VVP1 1343 aa16.41■□□□□ 0.22
KDM3B-203ENST00000505756 NUTM2FA1L443 756 aa16.4■□□□□ 0.22
KDM3B-203ENST00000505756 NBPF1Q3BBV0 1214 aa16.4■□□□□ 0.22
KDM3B-203ENST00000505756 SOS2Q07890 1332 aaPredicted RBP16.39■□□□□ 0.21
KDM3B-203ENST00000505756 NPHP3Q7Z494 1330 aa16.39■□□□□ 0.21
KDM3B-203ENST00000505756 MINK1Q8N4C8 1332 aaPredicted RBP16.38■□□□□ 0.21
KDM3B-203ENST00000505756 TONSLQ96HA7 1378 aa16.38■□□□□ 0.21
KDM3B-203ENST00000505756 ANKARQ7Z5J8 1434 aa16.37■□□□□ 0.21
KDM3B-203ENST00000505756 KIF1AQ12756 1690 aa16.37■□□□□ 0.21
KDM3B-203ENST00000505756 TRPM1Q7Z4N2 1603 aa16.37■□□□□ 0.21
KDM3B-203ENST00000505756 EIF3AQ14152 1382 aaKnown RBP16.37■□□□□ 0.21
KDM3B-203ENST00000505756 HIRIP3Q9BW71 556 aaPredicted RBP16.36■□□□□ 0.21
KDM3B-203ENST00000505756 WASLO00401 505 aaPredicted RBP16.35■□□□□ 0.21
KDM3B-203ENST00000505756 FOXO3O43524 673 aa16.35■□□□□ 0.21
KDM3B-203ENST00000505756 ILDR2Q71H61 639 aa16.35■□□□□ 0.21
KDM3B-203ENST00000505756 PNPLA6Q8IY17 1366 aa16.35■□□□□ 0.21
KDM3B-203ENST00000505756 PXDNQ92626 1479 aa16.35■□□□□ 0.21
KDM3B-203ENST00000505756 TULP4Q9NRJ4 1543 aa16.35■□□□□ 0.21
KDM3B-203ENST00000505756 LRP6O75581 1613 aa16.34■□□□□ 0.21
KDM3B-203ENST00000505756 PHF8Q9UPP1 1060 aa16.34■□□□□ 0.21
KDM3B-203ENST00000505756 USP32Q8NFA0 1604 aa16.34■□□□□ 0.21
KDM3B-203ENST00000505756 ROCK2O75116 1388 aaKnown RBP16.33■□□□□ 0.2
KDM3B-203ENST00000505756 RGPD8O14715 1765 aaPredicted RBP16.33■□□□□ 0.2
KDM3B-203ENST00000505756 CENPJQ9HC77 1338 aaPredicted RBP16.31■□□□□ 0.2
KDM3B-203ENST00000505756 NBPF8Q3BBV2 869 aa16.31■□□□□ 0.2
KDM3B-203ENST00000505756 MEX3CQ5U5Q3 659 aaKnown RBP16.31■□□□□ 0.2
KDM3B-203ENST00000505756 RGS17Q9UGC6 210 aaPredicted RBP16.31■□□□□ 0.2
KDM3B-203ENST00000505756 PRR36Q9H6K5 1346 aa16.3■□□□□ 0.2
KDM3B-203ENST00000505756 XPCQ01831 940 aaPredicted RBP16.3■□□□□ 0.2
KDM3B-203ENST00000505756 COL22A1Q8NFW1 1626 aaPredicted RBP16.3■□□□□ 0.2
KDM3B-203ENST00000505756 GPRASP1Q5JY77 1395 aa16.29■□□□□ 0.2
KDM3B-203ENST00000505756 NUTM2BA6NNL0 878 aaPredicted RBP16.29■□□□□ 0.2
KDM3B-203ENST00000505756 NUTM2EB1AL46 878 aaPredicted RBP16.29■□□□□ 0.2
KDM3B-203ENST00000505756 NUTM2AQ8IVF1 878 aaPredicted RBP16.29■□□□□ 0.2
KDM3B-203ENST00000505756 ATP7BP35670 1465 aa16.29■□□□□ 0.2
KDM3B-203ENST00000505756 PSME1Q06323 249 aa16.28■□□□□ 0.2
KDM3B-203ENST00000505756 KRT28Q7Z3Y7 464 aa16.28■□□□□ 0.2
KDM3B-203ENST00000505756 CDK19Q9BWU1 502 aa16.28■□□□□ 0.2
KDM3B-203ENST00000505756 QRICH2Q9H0J4 1663 aa16.27■□□□□ 0.2
KDM3B-203ENST00000505756 PMFBP1Q8TBY8 1022 aa16.27■□□□□ 0.2
KDM3B-203ENST00000505756 CCER1Q8TC90 406 aaPredicted RBP16.27■□□□□ 0.2
KDM3B-203ENST00000505756 RALGAPBQ86X10 1494 aa16.27■□□□□ 0.19
KDM3B-203ENST00000505756 SPATA31A3Q5VYP0 1347 aa16.26■□□□□ 0.19
KDM3B-203ENST00000505756 ITSN1Q15811 1721 aa16.26■□□□□ 0.19
KDM3B-203ENST00000505756 NUDT16Q96DE0 195 aaKnown RBP16.26■□□□□ 0.19
KDM3B-203ENST00000505756 SBNO1A3KN83 1393 aa16.26■□□□□ 0.19
KDM3B-203ENST00000505756 TNS3Q68CZ2 1445 aa16.25■□□□□ 0.19
KDM3B-203ENST00000505756 CARD11Q9BXL7 1154 aa16.24■□□□□ 0.19
KDM3B-203ENST00000505756 ZNF772Q68DY9 489 aaPredicted RBP16.23■□□□□ 0.19
KDM3B-203ENST00000505756 POTEAQ6S8J7 498 aa16.23■□□□□ 0.19
KDM3B-203ENST00000505756 CCDC61Q9Y6R9 512 aa16.23■□□□□ 0.19
KDM3B-203ENST00000505756 TOPAZ1Q8N9V7 1692 aa16.23■□□□□ 0.19
KDM3B-203ENST00000505756 ZEB1P37275 1124 aaPredicted RBP16.22■□□□□ 0.19
KDM3B-203ENST00000505756 SRPK2P78362 688 aaKnown RBP16.22■□□□□ 0.19
KDM3B-203ENST00000505756 NGDNQ8NEJ9 315 aaKnown RBP16.22■□□□□ 0.19
KDM3B-203ENST00000505756 C8orf37Q96NL8 207 aa16.22■□□□□ 0.19
KDM3B-203ENST00000505756 TIMELESSQ9UNS1 1208 aa16.22■□□□□ 0.19
KDM3B-203ENST00000505756 ARHGEF10O15013 1369 aa16.22■□□□□ 0.19
KDM3B-203ENST00000505756 SOCS7O14512 581 aa16.21■□□□□ 0.19
KDM3B-203ENST00000505756 ADAMTS2O95450 1211 aa16.21■□□□□ 0.19
KDM3B-203ENST00000505756 EVC2Q86UK5 1308 aa16.2■□□□□ 0.18
KDM3B-203ENST00000505756 TRPM3Q9HCF6 1732 aaPredicted RBP16.2■□□□□ 0.18
KDM3B-203ENST00000505756 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
KDM3B-203ENST00000505756 AFF2P51816 1311 aa16.19■□□□□ 0.18
KDM3B-203ENST00000505756 POLR3AO14802 1390 aaPredicted RBP16.19■□□□□ 0.18
KDM3B-203ENST00000505756 PLEKHG3A1L390 1219 aa16.19■□□□□ 0.18
KDM3B-203ENST00000505756 CABP2Q9NPB3 220 aa16.19■□□□□ 0.18
KDM3B-203ENST00000505756 LMOD2Q6P5Q4 547 aa16.18■□□□□ 0.18
KDM3B-203ENST00000505756 NGLY1Q96IV0 654 aa16.18■□□□□ 0.18
KDM3B-203ENST00000505756 PPIP5K1Q6PFW1 1433 aa16.18■□□□□ 0.18
KDM3B-203ENST00000505756 ALS2Q96Q42 1657 aa16.17■□□□□ 0.18
KDM3B-203ENST00000505756 ACEP12821 1306 aa16.17■□□□□ 0.18
KDM3B-203ENST00000505756 MARF1Q9Y4F3 1742 aaKnown RBP16.16■□□□□ 0.18
KDM3B-203ENST00000505756 PAK3O75914 559 aaPredicted RBP16.15■□□□□ 0.18
KDM3B-203ENST00000505756 HAP1P54257 671 aaPredicted RBP16.15■□□□□ 0.18
KDM3B-203ENST00000505756 FNBP4Q8N3X1 1017 aaPredicted RBP16.15■□□□□ 0.18
KDM3B-203ENST00000505756 ABCA3Q99758 1704 aa16.14■□□□□ 0.17
KDM3B-203ENST00000505756 CABLES1Q8TDN4 633 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms