RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 YTHDC2Q9H6S0 1430 aaKnown RBP29.12■■■□□ 2.25
HERC6-205ENST00000504905 MEX3CQ5U5Q3 659 aaKnown RBP29.12■■■□□ 2.25
HERC6-205ENST00000504905 ABCC11Q96J66 1382 aa29.1■■■□□ 2.25
HERC6-205ENST00000504905 TECPR2O15040 1411 aa29.1■■■□□ 2.25
HERC6-205ENST00000504905 BRINP3Q76B58 766 aa29.08■■■□□ 2.25
HERC6-205ENST00000504905 ADGRB1O14514 1584 aa29.08■■■□□ 2.25
HERC6-205ENST00000504905 NALCNQ8IZF0 1738 aa29.08■■■□□ 2.25
HERC6-205ENST00000504905 KIAA1210Q9ULL0 1709 aa29.08■■■□□ 2.25
HERC6-205ENST00000504905 DCCP43146 1447 aa29.07■■■□□ 2.24
HERC6-205ENST00000504905 ADGRL3Q9HAR2 1447 aa29.06■■■□□ 2.24
HERC6-205ENST00000504905 TONSLQ96HA7 1378 aa29.06■■■□□ 2.24
HERC6-205ENST00000504905 UPF1Q92900 1129 aaKnown RBP eCLIP29.04■■■□□ 2.24
HERC6-205ENST00000504905 CLSPNQ9HAW4 1339 aa29■■■□□ 2.23
HERC6-205ENST00000504905 WAPLQ7Z5K2 1190 aa29■■■□□ 2.23
HERC6-205ENST00000504905 DLC1Q96QB1 1528 aa28.99■■■□□ 2.23
HERC6-205ENST00000504905 RXRBP28702 533 aa28.99■■■□□ 2.23
HERC6-205ENST00000504905 SIRT1Q96EB6 747 aa28.99■■■□□ 2.23
HERC6-205ENST00000504905 PLEKHH1Q9ULM0 1364 aa28.98■■■□□ 2.23
HERC6-205ENST00000504905 MST1RQ04912 1400 aa28.97■■■□□ 2.23
HERC6-205ENST00000504905 TRAK1Q9UPV9 953 aa28.97■■■□□ 2.23
HERC6-205ENST00000504905 CDK12Q9NYV4 1490 aaPredicted RBP28.97■■■□□ 2.23
HERC6-205ENST00000504905 NUTM2BA6NNL0 878 aaPredicted RBP28.96■■■□□ 2.23
HERC6-205ENST00000504905 NUTM2EB1AL46 878 aaPredicted RBP28.96■■■□□ 2.23
HERC6-205ENST00000504905 NUTM2AQ8IVF1 878 aaPredicted RBP28.96■■■□□ 2.23
HERC6-205ENST00000504905 CCER1Q8TC90 406 aaPredicted RBP28.96■■■□□ 2.23
HERC6-205ENST00000504905 TRPM1Q7Z4N2 1603 aa28.95■■■□□ 2.23
HERC6-205ENST00000504905 NHSL1Q5SYE7 1610 aa28.94■■■□□ 2.22
HERC6-205ENST00000504905 NBPF1Q3BBV0 1214 aa28.94■■■□□ 2.22
HERC6-205ENST00000504905 PRAM1Q96QH2 718 aa28.94■■■□□ 2.22
HERC6-205ENST00000504905 LRRC59Q96AG4 307 aaKnown RBP28.93■■■□□ 2.22
HERC6-205ENST00000504905 POGKQ9P215 609 aa28.93■■■□□ 2.22
HERC6-205ENST00000504905 CDC42BPGQ6DT37 1551 aa28.92■■■□□ 2.22
HERC6-205ENST00000504905 ARHGEF28Q8N1W1 1705 aaKnown RBP28.91■■■□□ 2.22
HERC6-205ENST00000504905 AFF2P51816 1311 aa28.91■■■□□ 2.22
HERC6-205ENST00000504905 SAFB2Q14151 953 aaKnown RBP eCLIP28.9■■■□□ 2.22
HERC6-205ENST00000504905 NBPF8Q3BBV2 869 aa28.87■■■□□ 2.21
HERC6-205ENST00000504905 ROCK2O75116 1388 aaKnown RBP28.86■■■□□ 2.21
HERC6-205ENST00000504905 PNPLA6Q8IY17 1366 aa28.84■■■□□ 2.21
HERC6-205ENST00000504905 C1orf167Q5SNV9 1468 aa28.83■■■□□ 2.21
HERC6-205ENST00000504905 FMN2Q9NZ56 1722 aa28.82■■■□□ 2.2
HERC6-205ENST00000504905 DDX17Q92841 729 aaKnown RBP28.81■■■□□ 2.2
HERC6-205ENST00000504905 C8orf37Q96NL8 207 aa28.81■■■□□ 2.2
HERC6-205ENST00000504905 ADGRB2O60241 1585 aa28.8■■■□□ 2.2
HERC6-205ENST00000504905 QTRT2Q9H974 415 aaKnown RBP28.8■■■□□ 2.2
HERC6-205ENST00000504905 TIMELESSQ9UNS1 1208 aa28.8■■■□□ 2.2
HERC6-205ENST00000504905 MINK1Q8N4C8 1332 aaPredicted RBP28.79■■■□□ 2.2
HERC6-205ENST00000504905 RBM6P78332 1123 aaKnown RBP28.79■■■□□ 2.2
HERC6-205ENST00000504905 RALGAPBQ86X10 1494 aa28.78■■■□□ 2.2
HERC6-205ENST00000504905 HIRIP3Q9BW71 556 aaPredicted RBP28.77■■■□□ 2.2
HERC6-205ENST00000504905 RGS12O14924 1447 aa28.77■■■□□ 2.2
HERC6-205ENST00000504905 NUTM2FA1L443 756 aa28.76■■■□□ 2.19
HERC6-205ENST00000504905 GPRASP1Q5JY77 1395 aa28.75■■■□□ 2.19
HERC6-205ENST00000504905 CENPJQ9HC77 1338 aaPredicted RBP28.73■■■□□ 2.19
HERC6-205ENST00000504905 ORAI2Q96SN7 254 aa28.73■■■□□ 2.19
HERC6-205ENST00000504905 ESCO1Q5FWF5 840 aa28.72■■■□□ 2.19
HERC6-205ENST00000504905 CARD11Q9BXL7 1154 aa28.72■■■□□ 2.19
HERC6-205ENST00000504905 QRICH2Q9H0J4 1663 aa28.72■■■□□ 2.19
HERC6-205ENST00000504905 RGPD8O14715 1765 aaPredicted RBP28.72■■■□□ 2.19
HERC6-205ENST00000504905 NGLY1Q96IV0 654 aa28.71■■■□□ 2.19
HERC6-205ENST00000504905 EIF3AQ14152 1382 aaKnown RBP28.71■■■□□ 2.19
HERC6-205ENST00000504905 SOS2Q07890 1332 aaPredicted RBP28.7■■■□□ 2.19
HERC6-205ENST00000504905 WASLO00401 505 aaPredicted RBP28.69■■■□□ 2.18
HERC6-205ENST00000504905 ADAMTS2O95450 1211 aa28.68■■■□□ 2.18
HERC6-205ENST00000504905 ANKARQ7Z5J8 1434 aa28.67■■■□□ 2.18
HERC6-205ENST00000504905 USP32Q8NFA0 1604 aa28.66■■■□□ 2.18
HERC6-205ENST00000504905 TULP4Q9NRJ4 1543 aa28.66■■■□□ 2.18
HERC6-205ENST00000504905 KIF1AQ12756 1690 aa28.66■■■□□ 2.18
HERC6-205ENST00000504905 USP21Q9UK80 565 aa28.62■■■□□ 2.17
HERC6-205ENST00000504905 FNBP4Q8N3X1 1017 aaPredicted RBP28.61■■■□□ 2.17
HERC6-205ENST00000504905 CDK19Q9BWU1 502 aa28.61■■■□□ 2.17
HERC6-205ENST00000504905 TRPC5Q9UL62 973 aaPredicted RBP28.6■■■□□ 2.17
HERC6-205ENST00000504905 PHF8Q9UPP1 1060 aa28.6■■■□□ 2.17
HERC6-205ENST00000504905 NPHP3Q7Z494 1330 aa28.6■■■□□ 2.17
HERC6-205ENST00000504905 ATAD2Q6PL18 1390 aa28.6■■■□□ 2.17
HERC6-205ENST00000504905 ITSN1Q15811 1721 aa28.6■■■□□ 2.17
HERC6-205ENST00000504905 COL22A1Q8NFW1 1626 aaPredicted RBP28.59■■■□□ 2.17
HERC6-205ENST00000504905 PRR36Q9H6K5 1346 aa28.59■■■□□ 2.17
HERC6-205ENST00000504905 FOXO3O43524 673 aa28.58■■■□□ 2.17
HERC6-205ENST00000504905 ATP7BP35670 1465 aa28.56■■■□□ 2.16
HERC6-205ENST00000504905 ATRNO75882 1429 aa28.55■■■□□ 2.16
HERC6-205ENST00000504905 NUDT16Q96DE0 195 aaKnown RBP28.55■■■□□ 2.16
HERC6-205ENST00000504905 EVC2Q86UK5 1308 aa28.54■■■□□ 2.16
HERC6-205ENST00000504905 SRPK2P78362 688 aaKnown RBP28.54■■■□□ 2.16
HERC6-205ENST00000504905 PMFBP1Q8TBY8 1022 aa28.53■■■□□ 2.16
HERC6-205ENST00000504905 PXDNQ92626 1479 aa28.53■■■□□ 2.16
HERC6-205ENST00000504905 XPCQ01831 940 aaPredicted RBP28.52■■■□□ 2.16
HERC6-205ENST00000504905 SRCAPQ6ZRS2 3230 aa28.52■■■□□ 2.16
HERC6-205ENST00000504905 TOPAZ1Q8N9V7 1692 aa28.51■■■□□ 2.16
HERC6-205ENST00000504905 SBNO2Q9Y2G9 1366 aa28.51■■■□□ 2.16
HERC6-205ENST00000504905 CABP2Q9NPB3 220 aa28.5■■■□□ 2.15
HERC6-205ENST00000504905 USP47Q96K76 1375 aa28.49■■■□□ 2.15
HERC6-205ENST00000504905 CCDC61Q9Y6R9 512 aa28.48■■■□□ 2.15
HERC6-205ENST00000504905 BCL9LQ86UU0 1499 aa28.47■■■□□ 2.15
HERC6-205ENST00000504905 PSME1Q06323 249 aa28.47■■■□□ 2.15
HERC6-205ENST00000504905 KRT28Q7Z3Y7 464 aa28.47■■■□□ 2.15
HERC6-205ENST00000504905 ST20-MTHFSA0A0A6YYL1 179 aa28.46■■■□□ 2.15
HERC6-205ENST00000504905 NGDNQ8NEJ9 315 aaKnown RBP28.46■■■□□ 2.15
HERC6-205ENST00000504905 MARF1Q9Y4F3 1742 aaKnown RBP28.45■■■□□ 2.14
HERC6-205ENST00000504905 EP400Q96L91 3159 aa28.44■■■□□ 2.14
HERC6-205ENST00000504905 CCDC125Q86Z20 511 aa28.43■■■□□ 2.14
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