RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 KIF7Q2M1P5 1343 aa15.82■□□□□ 0.12
TRIO-206ENST00000504606 NWD1Q149M9 1564 aa15.81■□□□□ 0.12
TRIO-206ENST00000504606 MINK1Q8N4C8 1332 aaPredicted RBP15.81■□□□□ 0.12
TRIO-206ENST00000504606 CDCA8Q53HL2 280 aa15.78■□□□□ 0.12
TRIO-206ENST00000504606 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
TRIO-206ENST00000504606 TULP4Q9NRJ4 1543 aa15.78■□□□□ 0.12
TRIO-206ENST00000504606 EVC2Q86UK5 1308 aa15.77■□□□□ 0.12
TRIO-206ENST00000504606 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.77■□□□□ 0.11
TRIO-206ENST00000504606 DDX10Q13206 875 aaKnown RBP15.76■□□□□ 0.11
TRIO-206ENST00000504606 NKTRP30414 1462 aaKnown RBP15.76■□□□□ 0.11
TRIO-206ENST00000504606 STRCP1A6NGW2 1772 aa15.75■□□□□ 0.11
TRIO-206ENST00000504606 ADGRB2O60241 1585 aa15.74■□□□□ 0.11
TRIO-206ENST00000504606 SRPK2P78362 688 aaKnown RBP15.73■□□□□ 0.11
TRIO-206ENST00000504606 PROSER2Q86WR7 435 aaPredicted RBP15.73■□□□□ 0.11
TRIO-206ENST00000504606 WASLO00401 505 aaPredicted RBP15.72■□□□□ 0.11
TRIO-206ENST00000504606 RBM33Q96EV2 1170 aaKnown RBP15.72■□□□□ 0.11
TRIO-206ENST00000504606 CDK19Q9BWU1 502 aa15.72■□□□□ 0.11
TRIO-206ENST00000504606 CABP2Q9NPB3 220 aa15.72■□□□□ 0.11
TRIO-206ENST00000504606 ZNF335Q9H4Z2 1342 aaPredicted RBP15.71■□□□□ 0.11
TRIO-206ENST00000504606 DIEXFQ68CQ4 756 aaKnown RBP15.71■□□□□ 0.11
TRIO-206ENST00000504606 PUS7Q96PZ0 661 aaKnown RBP15.71■□□□□ 0.11
TRIO-206ENST00000504606 NALCNQ8IZF0 1738 aa15.71■□□□□ 0.1
TRIO-206ENST00000504606 C14orf37Q86TY3 774 aa15.7■□□□□ 0.1
TRIO-206ENST00000504606 MYOM1P52179 1685 aa15.7■□□□□ 0.1
TRIO-206ENST00000504606 ADGRL3Q9HAR2 1447 aa15.69■□□□□ 0.1
TRIO-206ENST00000504606 ATAD2Q6PL18 1390 aa15.69■□□□□ 0.1
TRIO-206ENST00000504606 TMEM94Q12767 1356 aa15.67■□□□□ 0.1
TRIO-206ENST00000504606 TMC1Q8TDI8 760 aa15.67■□□□□ 0.1
TRIO-206ENST00000504606 CDC42BPGQ6DT37 1551 aa15.66■□□□□ 0.1
TRIO-206ENST00000504606 FMN2Q9NZ56 1722 aa15.65■□□□□ 0.1
TRIO-206ENST00000504606 LRRC7Q96NW7 1537 aa15.65■□□□□ 0.1
TRIO-206ENST00000504606 NUTM2FA1L443 756 aa15.65■□□□□ 0.1
TRIO-206ENST00000504606 NCOA3Q9Y6Q9 1424 aa15.65■□□□□ 0.1
TRIO-206ENST00000504606 NUDT16Q96DE0 195 aaKnown RBP15.64■□□□□ 0.09
TRIO-206ENST00000504606 SLC12A5Q9H2X9 1139 aa15.64■□□□□ 0.09
TRIO-206ENST00000504606 PANK3Q9H999 370 aa15.64■□□□□ 0.09
TRIO-206ENST00000504606 ATP7BP35670 1465 aa15.64■□□□□ 0.09
TRIO-206ENST00000504606 PRR36Q9H6K5 1346 aa15.64■□□□□ 0.09
TRIO-206ENST00000504606 NINLQ9Y2I6 1382 aa15.63■□□□□ 0.09
TRIO-206ENST00000504606 XIRP1Q702N8 1843 aaKnown RBP15.63■□□□□ 0.09
TRIO-206ENST00000504606 USP32Q8NFA0 1604 aa15.62■□□□□ 0.09
TRIO-206ENST00000504606 C19orf44Q9H6X5 657 aa15.62■□□□□ 0.09
TRIO-206ENST00000504606 CCDC61Q9Y6R9 512 aa15.62■□□□□ 0.09
TRIO-206ENST00000504606 PPIP5K1Q6PFW1 1433 aa15.61■□□□□ 0.09
TRIO-206ENST00000504606 ANKARQ7Z5J8 1434 aa15.61■□□□□ 0.09
TRIO-206ENST00000504606 TOPAZ1Q8N9V7 1692 aa15.61■□□□□ 0.09
TRIO-206ENST00000504606 CABP1Q9NZU7 370 aa15.61■□□□□ 0.09
TRIO-206ENST00000504606 MSH6P52701 1360 aa15.61■□□□□ 0.09
TRIO-206ENST00000504606 ITSN1Q15811 1721 aa15.6■□□□□ 0.09
TRIO-206ENST00000504606 ANKRD36BQ8N2N9 1353 aa15.6■□□□□ 0.09
TRIO-206ENST00000504606 RGPD8O14715 1765 aaPredicted RBP15.59■□□□□ 0.09
TRIO-206ENST00000504606 LTBP4Q8N2S1 1624 aa15.59■□□□□ 0.09
TRIO-206ENST00000504606 DCCP43146 1447 aa15.59■□□□□ 0.09
TRIO-206ENST00000504606 ATF3P18847 181 aa15.58■□□□□ 0.08
TRIO-206ENST00000504606 TERF2IPQ9NYB0 399 aa15.58■□□□□ 0.08
TRIO-206ENST00000504606 A0A1W2PP64 1363 aa15.58■□□□□ 0.08
TRIO-206ENST00000504606 HDGFL2Q7Z4V5 671 aaPredicted RBP15.57■□□□□ 0.08
TRIO-206ENST00000504606 CD163L1Q9NR16 1453 aa15.57■□□□□ 0.08
TRIO-206ENST00000504606 PER1O15534 1290 aaPredicted RBP15.56■□□□□ 0.08
TRIO-206ENST00000504606 CADPS2Q86UW7 1296 aa15.56■□□□□ 0.08
TRIO-206ENST00000504606 KNSTRNQ9Y448 316 aa15.56■□□□□ 0.08
TRIO-206ENST00000504606 NSD3Q9BZ95 1437 aa15.55■□□□□ 0.08
TRIO-206ENST00000504606 PLEKHG3A1L390 1219 aa15.55■□□□□ 0.08
TRIO-206ENST00000504606 ANP32CO43423 234 aa15.55■□□□□ 0.08
TRIO-206ENST00000504606 CARD14Q9BXL6 1004 aa15.55■□□□□ 0.08
TRIO-206ENST00000504606 AKAP12Q02952 1782 aa15.54■□□□□ 0.08
TRIO-206ENST00000504606 MST1RQ04912 1400 aa15.54■□□□□ 0.08
TRIO-206ENST00000504606 CNGB1Q14028 1251 aaPredicted RBP15.54■□□□□ 0.08
TRIO-206ENST00000504606 PMFBP1Q8TBY8 1022 aa15.54■□□□□ 0.08
TRIO-206ENST00000504606 C1orf167Q5SNV9 1468 aa15.53■□□□□ 0.08
TRIO-206ENST00000504606 CPSF1Q10570 1443 aaKnown RBP15.53■□□□□ 0.08
TRIO-206ENST00000504606 ACEP12821 1306 aa15.53■□□□□ 0.08
TRIO-206ENST00000504606 ESCO1Q5FWF5 840 aa15.53■□□□□ 0.08
TRIO-206ENST00000504606 PHF8Q9UPP1 1060 aa15.53■□□□□ 0.08
TRIO-206ENST00000504606 KTN1Q86UP2 1357 aaKnown RBP15.52■□□□□ 0.08
TRIO-206ENST00000504606 MON2Q7Z3U7 1717 aa15.52■□□□□ 0.08
TRIO-206ENST00000504606 NGDNQ8NEJ9 315 aaKnown RBP15.52■□□□□ 0.08
TRIO-206ENST00000504606 MIER1Q8N108 512 aa15.51■□□□□ 0.07
TRIO-206ENST00000504606 ORAI2Q96SN7 254 aa15.51■□□□□ 0.07
TRIO-206ENST00000504606 ZNF692Q9BU19 519 aaPredicted RBP15.51■□□□□ 0.07
TRIO-206ENST00000504606 POLR3AO14802 1390 aaPredicted RBP15.5■□□□□ 0.07
TRIO-206ENST00000504606 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
TRIO-206ENST00000504606 CC2D1BQ5T0F9 858 aaKnown RBP15.5■□□□□ 0.07
TRIO-206ENST00000504606 KIF1AQ12756 1690 aa15.5■□□□□ 0.07
TRIO-206ENST00000504606 PRKRIP1Q9H875 184 aaPredicted RBP15.49■□□□□ 0.07
TRIO-206ENST00000504606 USP6P35125 1406 aa15.49■□□□□ 0.07
TRIO-206ENST00000504606 EDC4Q6P2E9 1401 aaKnown RBP15.49■□□□□ 0.07
TRIO-206ENST00000504606 CGNL1Q0VF96 1302 aa15.48■□□□□ 0.07
TRIO-206ENST00000504606 NRKQ7Z2Y5 1582 aa15.48■□□□□ 0.07
TRIO-206ENST00000504606 NPC1L1Q9UHC9 1359 aa15.48■□□□□ 0.07
TRIO-206ENST00000504606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.47■□□□□ 0.07
TRIO-206ENST00000504606 KIF20BQ96Q89 1820 aa15.47■□□□□ 0.07
TRIO-206ENST00000504606 SLAIN2Q9P270 581 aa15.46■□□□□ 0.07
TRIO-206ENST00000504606 RALBP1Q15311 655 aa15.45■□□□□ 0.06
TRIO-206ENST00000504606 NSD2O96028 1365 aa15.45■□□□□ 0.06
TRIO-206ENST00000504606 PARD3Q8TEW0 1356 aa15.45■□□□□ 0.06
TRIO-206ENST00000504606 TTC21BQ7Z4L5 1316 aa15.44■□□□□ 0.06
TRIO-206ENST00000504606 FOXO3O43524 673 aa15.44■□□□□ 0.06
TRIO-206ENST00000504606 PSME1Q06323 249 aa15.44■□□□□ 0.06
TRIO-206ENST00000504606 GGNBP2Q9H3C7 697 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms