RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 MFRPQ9BY79 579 aa6.09□□□□□ -1.43
USP46-205ENST00000504078 BCL11BQ9C0K0 894 aaPredicted RBP6.09□□□□□ -1.43
USP46-205ENST00000504078 PLA2R1Q13018 1463 aa6.09□□□□□ -1.44
USP46-205ENST00000504078 NPATQ14207 1427 aa6.08□□□□□ -1.44
USP46-205ENST00000504078 FMN1Q68DA7 1419 aa6.08□□□□□ -1.44
USP46-205ENST00000504078 DNMT1P26358 1616 aaKnown RBP6.08□□□□□ -1.44
USP46-205ENST00000504078 TBC1D12O60347 775 aa6.08□□□□□ -1.44
USP46-205ENST00000504078 ZNF777Q9ULD5 760 aaPredicted RBP6.08□□□□□ -1.44
USP46-205ENST00000504078 EEA1Q15075 1411 aa6.08□□□□□ -1.44
USP46-205ENST00000504078 PTPRKQ15262 1439 aa6.08□□□□□ -1.44
USP46-205ENST00000504078 SETD1BQ9UPS6 1966 aaKnown RBP6.07□□□□□ -1.44
USP46-205ENST00000504078 ZMYM3Q14202 1370 aa6.07□□□□□ -1.44
USP46-205ENST00000504078 ADGBQ8N7X0 1667 aa6.07□□□□□ -1.44
USP46-205ENST00000504078 VWDEQ8N2E2 1590 aa6.06□□□□□ -1.44
USP46-205ENST00000504078 STRCP1A6NGW2 1772 aa6.06□□□□□ -1.44
USP46-205ENST00000504078 GOLGA8CPA6NN73 597 aa6.06□□□□□ -1.44
USP46-205ENST00000504078 KCNK17Q96T54 332 aa6.06□□□□□ -1.44
USP46-205ENST00000504078 A2ML1A8K2U0 1454 aa6.06□□□□□ -1.44
USP46-205ENST00000504078 A2MP01023 1474 aa6.06□□□□□ -1.44
USP46-205ENST00000504078 RNF17Q9BXT8 1623 aaKnown RBP6.06□□□□□ -1.44
USP46-205ENST00000504078 CPS1P31327 1500 aa6.05□□□□□ -1.44
USP46-205ENST00000504078 CCDC18Q5T9S5 1454 aa6.05□□□□□ -1.44
USP46-205ENST00000504078 SHANK2Q9UPX8 1470 aa6.05□□□□□ -1.44
USP46-205ENST00000504078 BHMG1C9JSJ3 638 aaPredicted RBP6.05□□□□□ -1.44
USP46-205ENST00000504078 UBTFP17480 764 aaKnown RBP6.05□□□□□ -1.44
USP46-205ENST00000504078 LAPTM4AQ15012 233 aa6.05□□□□□ -1.44
USP46-205ENST00000504078 GGT6Q6P531 493 aa6.05□□□□□ -1.44
USP46-205ENST00000504078 STK24Q9Y6E0 443 aa6.05□□□□□ -1.44
USP46-205ENST00000504078 IQGAP1P46940 1657 aa6.04□□□□□ -1.44
USP46-205ENST00000504078 SPAG9O60271 1321 aaKnown RBP6.04□□□□□ -1.44
USP46-205ENST00000504078 HNRNPMP52272 730 aaKnown RBP eCLIP6.04□□□□□ -1.441e-7■■■□□ 14.8
USP46-205ENST00000504078 WNT2BQ93097 391 aa6.04□□□□□ -1.44
USP46-205ENST00000504078 SYNMO15061 1565 aa6.04□□□□□ -1.44
USP46-205ENST00000504078 TIAM1Q13009 1591 aa6.03□□□□□ -1.44
USP46-205ENST00000504078 CDK11AQ9UQ88 783 aaPredicted RBP6.03□□□□□ -1.44
USP46-205ENST00000504078 KDM5DQ9BY66 1539 aa6.03□□□□□ -1.44
USP46-205ENST00000504078 GPATCH8Q9UKJ3 1502 aaKnown RBP6.03□□□□□ -1.44
USP46-205ENST00000504078 TNRQ92752 1358 aa6.03□□□□□ -1.44
USP46-205ENST00000504078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.03□□□□□ -1.44
USP46-205ENST00000504078 CASKIN1Q8WXD9 1431 aa6.02□□□□□ -1.45
USP46-205ENST00000504078 ITGBL1O95965 494 aaPredicted RBP6.02□□□□□ -1.45
USP46-205ENST00000504078 FOXK1P85037 733 aa6.02□□□□□ -1.45
USP46-205ENST00000504078 PKD2Q13563 968 aa6.02□□□□□ -1.45
USP46-205ENST00000504078 MRPL50Q8N5N7 158 aaKnown RBP6.02□□□□□ -1.45
USP46-205ENST00000504078 FYCO1Q9BQS8 1478 aa6.02□□□□□ -1.45
USP46-205ENST00000504078 NPHP4O75161 1426 aaPredicted RBP6.01□□□□□ -1.45
USP46-205ENST00000504078 FBXO31Q5XUX0 539 aaPredicted RBP6.01□□□□□ -1.45
USP46-205ENST00000504078 BCL2L12Q9HB09 334 aa6.01□□□□□ -1.45
USP46-205ENST00000504078 PZPP20742 1482 aa6.01□□□□□ -1.45
USP46-205ENST00000504078 UGGT1Q9NYU2 1555 aa6.01□□□□□ -1.45
USP46-205ENST00000504078 ZC3H13Q5T200 1668 aaKnown RBP6.01□□□□□ -1.45
USP46-205ENST00000504078 LRRC7Q96NW7 1537 aa6□□□□□ -1.45
USP46-205ENST00000504078 CEP152O94986 1710 aa6□□□□□ -1.45
USP46-205ENST00000504078 TOM1O60784 492 aa6□□□□□ -1.45
USP46-205ENST00000504078 TRAF7Q6Q0C0 670 aa6□□□□□ -1.45
USP46-205ENST00000504078 PLPP6Q8IY26 295 aa6□□□□□ -1.45
USP46-205ENST00000504078 ZNF644Q9H582 1327 aaPredicted RBP5.99□□□□□ -1.45
USP46-205ENST00000504078 DEPDC5O75140 1603 aa5.99□□□□□ -1.45
USP46-205ENST00000504078 XIRP1Q702N8 1843 aaKnown RBP5.99□□□□□ -1.45
USP46-205ENST00000504078 CCNB3Q8WWL7 1395 aa5.99□□□□□ -1.45
USP46-205ENST00000504078 STK25O00506 426 aa5.99□□□□□ -1.45
USP46-205ENST00000504078 NBPF3Q9H094 633 aa5.99□□□□□ -1.45
USP46-205ENST00000504078 FAM135AQ9P2D6 1515 aa5.99□□□□□ -1.45
USP46-205ENST00000504078 PLEKHH2Q8IVE3 1493 aa5.98□□□□□ -1.45
USP46-205ENST00000504078 PTPREP23469 700 aa5.98□□□□□ -1.45
USP46-205ENST00000504078 ZBED2Q9BTP6 218 aa5.98□□□□□ -1.45
USP46-205ENST00000504078 GPHNQ9NQX3 736 aaPredicted RBP5.98□□□□□ -1.45
USP46-205ENST00000504078 RGS17Q9UGC6 210 aaPredicted RBP5.98□□□□□ -1.45
USP46-205ENST00000504078 EHBP1L1Q8N3D4 1523 aa5.98□□□□□ -1.45
USP46-205ENST00000504078 ROBO1Q9Y6N7 1651 aa5.98□□□□□ -1.45
USP46-205ENST00000504078 CAMSAP2Q08AD1 1489 aa5.97□□□□□ -1.45
USP46-205ENST00000504078 MTUS2Q5JR59 1369 aa5.97□□□□□ -1.45
USP46-205ENST00000504078 NYAP1Q6ZVC0 841 aa5.97□□□□□ -1.45
USP46-205ENST00000504078 CFDP1Q9UEE9 299 aaPredicted RBP5.97□□□□□ -1.45
USP46-205ENST00000504078 ABCC3O15438 1527 aa5.97□□□□□ -1.45
USP46-205ENST00000504078 UBR1Q8IWV7 1749 aa5.96□□□□□ -1.45
USP46-205ENST00000504078 ERVK-7P63135 1459 aa5.96□□□□□ -1.45
USP46-205ENST00000504078 CCDC141Q6ZP82 1450 aa5.96□□□□□ -1.45
USP46-205ENST00000504078 MBD5Q9P267 1494 aa5.96□□□□□ -1.45
USP46-205ENST00000504078 MROH1Q8NDA8 1641 aa5.96□□□□□ -1.45
USP46-205ENST00000504078 KIF3BO15066 747 aa5.96□□□□□ -1.46
USP46-205ENST00000504078 POTEAQ6S8J7 498 aa5.96□□□□□ -1.46
USP46-205ENST00000504078 ZNF454Q8N9F8 522 aa5.96□□□□□ -1.46
USP46-205ENST00000504078 KIAA1107Q9UPP5 1409 aa5.96□□□□□ -1.46
USP46-205ENST00000504078 MED14O60244 1454 aa5.96□□□□□ -1.46
USP46-205ENST00000504078 NLRP1Q9C000 1473 aa5.96□□□□□ -1.46
USP46-205ENST00000504078 ANKLE2Q86XL3 938 aa5.95□□□□□ -1.46
USP46-205ENST00000504078 RBM33Q96EV2 1170 aaKnown RBP5.95□□□□□ -1.46
USP46-205ENST00000504078 SCAF11Q99590 1463 aaKnown RBP5.95□□□□□ -1.46
USP46-205ENST00000504078 MAP3K1Q13233 1512 aa5.94□□□□□ -1.46
USP46-205ENST00000504078 MIA2Q96PC5 1412 aa5.94□□□□□ -1.46
USP46-205ENST00000504078 GFRA3O60609 400 aa5.94□□□□□ -1.46
USP46-205ENST00000504078 PIK3C2BO00750 1634 aa5.94□□□□□ -1.46
USP46-205ENST00000504078 NCOA2Q15596 1464 aa5.94□□□□□ -1.46
USP46-205ENST00000504078 PHLPP1O60346 1717 aa5.94□□□□□ -1.46
USP46-205ENST00000504078 DHX29Q7Z478 1369 aaKnown RBP5.93□□□□□ -1.46
USP46-205ENST00000504078 LRP6O75581 1613 aa5.93□□□□□ -1.46
USP46-205ENST00000504078 PPP1R37O75864 691 aa5.93□□□□□ -1.46
USP46-205ENST00000504078 FOSBP53539 338 aa5.93□□□□□ -1.46
USP46-205ENST00000504078 KCNC4Q03721 635 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms