RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 DACH1Q9UI36 760 aa8.44□□□□□ -1.06
SMN2-204ENST00000503678 UBTFP17480 764 aaKnown RBP8.43□□□□□ -1.06
SMN2-204ENST00000503678 NFX1Q12986 1120 aaKnown RBP8.43□□□□□ -1.06
SMN2-204ENST00000503678 PLA2G2CQ5R387 149 aa8.43□□□□□ -1.06
SMN2-204ENST00000503678 GIGYF2Q6Y7W6 1299 aaKnown RBP8.43□□□□□ -1.06
SMN2-204ENST00000503678 C11orf95C9JLR9 678 aaPredicted RBP8.42□□□□□ -1.06
SMN2-204ENST00000503678 NR1I2O75469 434 aa8.42□□□□□ -1.06
SMN2-204ENST00000503678 SLC6A16Q9GZN6 736 aa8.42□□□□□ -1.06
SMN2-204ENST00000503678 GMPR2Q9P2T1 348 aaKnown RBP8.42□□□□□ -1.06
SMN2-204ENST00000503678 DNAJB2P25686 324 aa8.41□□□□□ -1.06
SMN2-204ENST00000503678 FOXC1Q12948 553 aa8.41□□□□□ -1.06
SMN2-204ENST00000503678 PCMTD1Q96MG8 357 aaPredicted RBP8.41□□□□□ -1.06
SMN2-204ENST00000503678 AXIN1O15169 862 aa8.4□□□□□ -1.06
SMN2-204ENST00000503678 MS4A1P11836 297 aa8.4□□□□□ -1.06
SMN2-204ENST00000503678 CTC1Q2NKJ3 1217 aa8.4□□□□□ -1.06
SMN2-204ENST00000503678 RBM46Q8TBY0 533 aaKnown RBP8.4□□□□□ -1.06
SMN2-204ENST00000503678 TMEM134Q9H6X4 195 aa8.4□□□□□ -1.06
SMN2-204ENST00000503678 TOR4AQ9NXH8 423 aa8.4□□□□□ -1.06
SMN2-204ENST00000503678 CLCN1P35523 988 aa8.39□□□□□ -1.07
SMN2-204ENST00000503678 SMCPP49901 116 aaPredicted RBP8.39□□□□□ -1.07
SMN2-204ENST00000503678 RPIAP49247 311 aa8.38□□□□□ -1.07
SMN2-204ENST00000503678 SH3D19Q5HYK7 790 aa8.38□□□□□ -1.07
SMN2-204ENST00000503678 A6NJR5 290 aa8.37□□□□□ -1.07
SMN2-204ENST00000503678 CFHP08603 1231 aa8.37□□□□□ -1.07
SMN2-204ENST00000503678 SCUBE3Q8IX30 993 aa8.37□□□□□ -1.07
SMN2-204ENST00000503678 REPIN1Q9BWE0 567 aaKnown RBP8.37□□□□□ -1.07
SMN2-204ENST00000503678 C1orf115Q9H7X2 142 aa8.37□□□□□ -1.07
SMN2-204ENST00000503678 GPCPD1Q9NPB8 672 aa8.37□□□□□ -1.07
SMN2-204ENST00000503678 CD2BP2O95400 341 aaKnown RBP8.36□□□□□ -1.07
SMN2-204ENST00000503678 ADGRG1Q9Y653 693 aa8.36□□□□□ -1.07
SMN2-204ENST00000503678 CYP4X1Q8N118 509 aa8.35□□□□□ -1.07
SMN2-204ENST00000503678 ARID3AQ99856 593 aa8.35□□□□□ -1.07
SMN2-204ENST00000503678 APBB1O00213 710 aa8.34□□□□□ -1.07
SMN2-204ENST00000503678 SLC10A3P09131 477 aa8.34□□□□□ -1.07
SMN2-204ENST00000503678 RCCD1A6NED2 376 aa8.33□□□□□ -1.08
SMN2-204ENST00000503678 MDM2Q00987 491 aaPredicted RBP8.33□□□□□ -1.08
SMN2-204ENST00000503678 FAM161AQ3B820 660 aa8.33□□□□□ -1.08
SMN2-204ENST00000503678 SPSB2Q99619 263 aa8.33□□□□□ -1.08
SMN2-204ENST00000503678 PODXL2Q9NZ53 605 aa8.33□□□□□ -1.08
SMN2-204ENST00000503678 SKIV2LQ15477 1246 aaKnown RBP8.32□□□□□ -1.08
SMN2-204ENST00000503678 ARID3CA6NKF2 412 aa8.31□□□□□ -1.08
SMN2-204ENST00000503678 TERTO14746 1132 aaKnown RBP8.31□□□□□ -1.08
SMN2-204ENST00000503678 TRAK2O60296 914 aa8.31□□□□□ -1.08
SMN2-204ENST00000503678 SSTR3P32745 418 aaPredicted RBP8.31□□□□□ -1.08
SMN2-204ENST00000503678 MCM6Q14566 821 aa8.31□□□□□ -1.08
SMN2-204ENST00000503678 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.3□□□□□ -1.08
SMN2-204ENST00000503678 LOC100996750A0A140TA64 210 aa8.3□□□□□ -1.08
SMN2-204ENST00000503678 OATP04181 439 aa8.3□□□□□ -1.08
SMN2-204ENST00000503678 PHOX2BQ99453 314 aa8.3□□□□□ -1.08
SMN2-204ENST00000503678 KRTAP4-6Q9BYQ5 205 aa8.3□□□□□ -1.08
SMN2-204ENST00000503678 LCE2CQ5TA81 110 aa8.29□□□□□ -1.08
SMN2-204ENST00000503678 CLUAP1Q96AJ1 413 aa8.29□□□□□ -1.08
SMN2-204ENST00000503678 BEGAINQ9BUH8 593 aa8.29□□□□□ -1.08
SMN2-204ENST00000503678 RSPH4AQ5TD94 716 aa8.28□□□□□ -1.08
SMN2-204ENST00000503678 METTL3Q86U44 580 aaKnown RBP8.28□□□□□ -1.08
SMN2-204ENST00000503678 TTC24A2A3L6 582 aaPredicted RBP8.27□□□□□ -1.09
SMN2-204ENST00000503678 FAM181BA6NEQ2 426 aa8.27□□□□□ -1.09
SMN2-204ENST00000503678 PUS10Q3MIT2 529 aaKnown RBP8.27□□□□□ -1.09
SMN2-204ENST00000503678 SENP2Q9HC62 589 aa8.27□□□□□ -1.09
SMN2-204ENST00000503678 ATP13A2Q9NQ11 1180 aa8.27□□□□□ -1.09
SMN2-204ENST00000503678 FAM217BQ9NTX9 383 aaPredicted RBP8.27□□□□□ -1.09
SMN2-204ENST00000503678 SNRPBP14678 240 aaKnown RBP8.26□□□□□ -1.09
SMN2-204ENST00000503678 PXYLP1Q8TE99 480 aa8.26□□□□□ -1.09
SMN2-204ENST00000503678 FCF1Q9Y324 198 aaKnown RBP8.26□□□□□ -1.09
SMN2-204ENST00000503678 TRIM26Q12899 539 aaPredicted RBP8.25□□□□□ -1.09
SMN2-204ENST00000503678 CCDC82Q8N4S0 544 aa8.25□□□□□ -1.09
SMN2-204ENST00000503678 TRIM47Q96LD4 638 aa8.25□□□□□ -1.09
SMN2-204ENST00000503678 PROSER2Q86WR7 435 aaPredicted RBP8.24□□□□□ -1.09
SMN2-204ENST00000503678 RAD21O60216 631 aa8.23□□□□□ -1.09
SMN2-204ENST00000503678 SMPD1P17405 629 aa8.23□□□□□ -1.09
SMN2-204ENST00000503678 DIXDC1Q155Q3 683 aa8.23□□□□□ -1.09
SMN2-204ENST00000503678 PROCA1Q8NCQ7 364 aaPredicted RBP8.23□□□□□ -1.09
SMN2-204ENST00000503678 SNIP1Q8TAD8 396 aaKnown RBP8.23□□□□□ -1.09
SMN2-204ENST00000503678 THAP11Q96EK4 314 aa8.23□□□□□ -1.09
SMN2-204ENST00000503678 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.23□□□□□ -1.09
SMN2-204ENST00000503678 ATP1B4Q9UN42 357 aaPredicted RBP8.23□□□□□ -1.09
SMN2-204ENST00000503678 ZBTB24O43167 697 aaPredicted RBP8.22□□□□□ -1.09
SMN2-204ENST00000503678 MYSM1Q5VVJ2 828 aa8.22□□□□□ -1.09
SMN2-204ENST00000503678 FAM160A2Q8N612 972 aaPredicted RBP8.22□□□□□ -1.09
SMN2-204ENST00000503678 POLR3EQ9NVU0 708 aa8.22□□□□□ -1.09
SMN2-204ENST00000503678 SPDYE5A6NIY4 337 aa8.21□□□□□ -1.1
SMN2-204ENST00000503678 WNT7AO00755 349 aa8.21□□□□□ -1.1
SMN2-204ENST00000503678 BANK1Q8NDB2 785 aa8.21□□□□□ -1.1
SMN2-204ENST00000503678 KIFC2Q96AC6 838 aa8.21□□□□□ -1.1
SMN2-204ENST00000503678 FMNL1O95466 1100 aaPredicted RBP8.2□□□□□ -1.1
SMN2-204ENST00000503678 PDIA4P13667 645 aaKnown RBP8.2□□□□□ -1.1
SMN2-204ENST00000503678 CLK2P49760 499 aaKnown RBP8.2□□□□□ -1.1
SMN2-204ENST00000503678 MORN1Q5T089 497 aa8.2□□□□□ -1.1
SMN2-204ENST00000503678 FNBP4Q8N3X1 1017 aaPredicted RBP8.2□□□□□ -1.1
SMN2-204ENST00000503678 RDH13Q8NBN7 331 aa8.2□□□□□ -1.1
SMN2-204ENST00000503678 SLC16A10Q8TF71 515 aa8.2□□□□□ -1.1
SMN2-204ENST00000503678 HRCP23327 699 aa8.19□□□□□ -1.1
SMN2-204ENST00000503678 SALL2Q9Y467 1007 aaPredicted RBP8.19□□□□□ -1.1
SMN2-204ENST00000503678 NLRP7Q8WX94 980 aa8.18□□□□□ -1.1
SMN2-204ENST00000503678 TBC1D2Q9BYX2 928 aa8.18□□□□□ -1.1
SMN2-204ENST00000503678 DDX11L8A8MPP1 907 aa8.17□□□□□ -1.1
SMN2-204ENST00000503678 ATP6V1AP38606 617 aa8.17□□□□□ -1.1
SMN2-204ENST00000503678 TMEM259Q4ZIN3 620 aa8.17□□□□□ -1.1
SMN2-204ENST00000503678 POM121Q96HA1 1249 aa8.17□□□□□ -1.1
SMN2-204ENST00000503678 SERPINA10Q9UK55 444 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms