RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 DDX10Q13206 875 aaKnown RBP21.2■□□□□ 0.99
MBD4-204ENST00000503197 NWD1Q149M9 1564 aa21.2■□□□□ 0.98
MBD4-204ENST00000503197 SLC24A1O60721 1099 aa21.19■□□□□ 0.98
MBD4-204ENST00000503197 MINK1Q8N4C8 1332 aaPredicted RBP21.19■□□□□ 0.98
MBD4-204ENST00000503197 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.18■□□□□ 0.98
MBD4-204ENST00000503197 POLR3GLQ9BT43 218 aa21.17■□□□□ 0.98
MBD4-204ENST00000503197 DIEXFQ68CQ4 756 aaKnown RBP21.16■□□□□ 0.98
MBD4-204ENST00000503197 STRCP1A6NGW2 1772 aa21.15■□□□□ 0.98
MBD4-204ENST00000503197 EVC2Q86UK5 1308 aa21.14■□□□□ 0.98
MBD4-204ENST00000503197 CDCA8Q53HL2 280 aa21.14■□□□□ 0.98
MBD4-204ENST00000503197 MYOM1P52179 1685 aa21.13■□□□□ 0.97
MBD4-204ENST00000503197 ADGRB2O60241 1585 aa21.13■□□□□ 0.97
MBD4-204ENST00000503197 NKTRP30414 1462 aaKnown RBP21.11■□□□□ 0.97
MBD4-204ENST00000503197 PUS7Q96PZ0 661 aaKnown RBP21.09■□□□□ 0.97
MBD4-204ENST00000503197 CDK19Q9BWU1 502 aa21.09■□□□□ 0.97
MBD4-204ENST00000503197 CABP2Q9NPB3 220 aa21.09■□□□□ 0.97
MBD4-204ENST00000503197 NALCNQ8IZF0 1738 aa21.09■□□□□ 0.97
MBD4-204ENST00000503197 WASLO00401 505 aaPredicted RBP21.08■□□□□ 0.97
MBD4-204ENST00000503197 RBM33Q96EV2 1170 aaKnown RBP21.08■□□□□ 0.97
MBD4-204ENST00000503197 SRPK2P78362 688 aaKnown RBP21.07■□□□□ 0.96
MBD4-204ENST00000503197 DMRT2Q9Y5R5 561 aa21.07■□□□□ 0.96
MBD4-204ENST00000503197 ZNF335Q9H4Z2 1342 aaPredicted RBP21.04■□□□□ 0.96
MBD4-204ENST00000503197 PROSER2Q86WR7 435 aaPredicted RBP21.03■□□□□ 0.96
MBD4-204ENST00000503197 ADGRL3Q9HAR2 1447 aa21.03■□□□□ 0.96
MBD4-204ENST00000503197 ATAD2Q6PL18 1390 aa21.02■□□□□ 0.96
MBD4-204ENST00000503197 SLC12A5Q9H2X9 1139 aa21.01■□□□□ 0.95
MBD4-204ENST00000503197 ATP7BP35670 1465 aa21.01■□□□□ 0.95
MBD4-204ENST00000503197 CDC42BPGQ6DT37 1551 aa21.01■□□□□ 0.95
MBD4-204ENST00000503197 PANK3Q9H999 370 aa21.01■□□□□ 0.95
MBD4-204ENST00000503197 PRR36Q9H6K5 1346 aa21■□□□□ 0.95
MBD4-204ENST00000503197 USP32Q8NFA0 1604 aa21■□□□□ 0.95
MBD4-204ENST00000503197 TMEM94Q12767 1356 aa21■□□□□ 0.95
MBD4-204ENST00000503197 FMN2Q9NZ56 1722 aa21■□□□□ 0.95
MBD4-204ENST00000503197 XIRP1Q702N8 1843 aaKnown RBP20.99■□□□□ 0.95
MBD4-204ENST00000503197 TMC1Q8TDI8 760 aa20.99■□□□□ 0.95
MBD4-204ENST00000503197 PER1O15534 1290 aaPredicted RBP20.98■□□□□ 0.95
MBD4-204ENST00000503197 NUDT16Q96DE0 195 aaKnown RBP20.98■□□□□ 0.95
MBD4-204ENST00000503197 LRRC7Q96NW7 1537 aa20.98■□□□□ 0.95
MBD4-204ENST00000503197 NINLQ9Y2I6 1382 aa20.97■□□□□ 0.95
MBD4-204ENST00000503197 TOPAZ1Q8N9V7 1692 aa20.97■□□□□ 0.95
MBD4-204ENST00000503197 NCOA3Q9Y6Q9 1424 aa20.97■□□□□ 0.95
MBD4-204ENST00000503197 CD163L1Q9NR16 1453 aa20.96■□□□□ 0.95
MBD4-204ENST00000503197 RGPD8O14715 1765 aaPredicted RBP20.96■□□□□ 0.95
MBD4-204ENST00000503197 NUTM2FA1L443 756 aa20.95■□□□□ 0.94
MBD4-204ENST00000503197 C14orf37Q86TY3 774 aa20.95■□□□□ 0.94
MBD4-204ENST00000503197 CABP1Q9NZU7 370 aa20.95■□□□□ 0.94
MBD4-204ENST00000503197 CCDC61Q9Y6R9 512 aa20.95■□□□□ 0.94
MBD4-204ENST00000503197 PPIP5K1Q6PFW1 1433 aa20.95■□□□□ 0.94
MBD4-204ENST00000503197 CARD14Q9BXL6 1004 aa20.93■□□□□ 0.94
MBD4-204ENST00000503197 ANKRD36BQ8N2N9 1353 aa20.93■□□□□ 0.94
MBD4-204ENST00000503197 C19orf44Q9H6X5 657 aa20.93■□□□□ 0.94
MBD4-204ENST00000503197 ANKARQ7Z5J8 1434 aa20.92■□□□□ 0.94
MBD4-204ENST00000503197 MIER1Q8N108 512 aa20.92■□□□□ 0.94
MBD4-204ENST00000503197 A0A1W2PP64 1363 aa20.92■□□□□ 0.94
MBD4-204ENST00000503197 ITSN1Q15811 1721 aa20.91■□□□□ 0.94
MBD4-204ENST00000503197 LTBP4Q8N2S1 1624 aa20.9■□□□□ 0.94
MBD4-204ENST00000503197 DCCP43146 1447 aa20.89■□□□□ 0.93
MBD4-204ENST00000503197 CPSF1Q10570 1443 aaKnown RBP20.89■□□□□ 0.93
MBD4-204ENST00000503197 PLEKHG3A1L390 1219 aa20.88■□□□□ 0.93
MBD4-204ENST00000503197 TERF2IPQ9NYB0 399 aa20.88■□□□□ 0.93
MBD4-204ENST00000503197 NSD3Q9BZ95 1437 aa20.88■□□□□ 0.93
MBD4-204ENST00000503197 AKAP12Q02952 1782 aa20.87■□□□□ 0.93
MBD4-204ENST00000503197 AMER1Q5JTC6 1135 aaPredicted RBP20.87■□□□□ 0.93
MBD4-204ENST00000503197 KNSTRNQ9Y448 316 aa20.87■□□□□ 0.93
MBD4-204ENST00000503197 ANP32CO43423 234 aa20.86■□□□□ 0.93
MBD4-204ENST00000503197 MSH6P52701 1360 aa20.86■□□□□ 0.93
MBD4-204ENST00000503197 PRKRIP1Q9H875 184 aaPredicted RBP20.85■□□□□ 0.93
MBD4-204ENST00000503197 MON2Q7Z3U7 1717 aa20.85■□□□□ 0.93
MBD4-204ENST00000503197 HDGFL2Q7Z4V5 671 aaPredicted RBP20.84■□□□□ 0.93
MBD4-204ENST00000503197 ACEP12821 1306 aa20.84■□□□□ 0.93
MBD4-204ENST00000503197 MST1RQ04912 1400 aa20.84■□□□□ 0.93
MBD4-204ENST00000503197 ATF3P18847 181 aa20.84■□□□□ 0.93
MBD4-204ENST00000503197 C1orf167Q5SNV9 1468 aa20.83■□□□□ 0.93
MBD4-204ENST00000503197 POLR3AO14802 1390 aaPredicted RBP20.83■□□□□ 0.93
MBD4-204ENST00000503197 CNGB1Q14028 1251 aaPredicted RBP20.83■□□□□ 0.93
MBD4-204ENST00000503197 PMFBP1Q8TBY8 1022 aa20.83■□□□□ 0.93
MBD4-204ENST00000503197 KTN1Q86UP2 1357 aaKnown RBP20.82■□□□□ 0.92
MBD4-204ENST00000503197 NPC1L1Q9UHC9 1359 aa20.82■□□□□ 0.92
MBD4-204ENST00000503197 CADPS2Q86UW7 1296 aa20.82■□□□□ 0.92
MBD4-204ENST00000503197 CC2D1BQ5T0F9 858 aaKnown RBP20.81■□□□□ 0.92
MBD4-204ENST00000503197 NRKQ7Z2Y5 1582 aa20.8■□□□□ 0.92
MBD4-204ENST00000503197 ORAI2Q96SN7 254 aa20.8■□□□□ 0.92
MBD4-204ENST00000503197 ZNF692Q9BU19 519 aaPredicted RBP20.8■□□□□ 0.92
MBD4-204ENST00000503197 PHF8Q9UPP1 1060 aa20.8■□□□□ 0.92
MBD4-204ENST00000503197 ESCO1Q5FWF5 840 aa20.79■□□□□ 0.92
MBD4-204ENST00000503197 PARD3Q8TEW0 1356 aa20.79■□□□□ 0.92
MBD4-204ENST00000503197 EDC4Q6P2E9 1401 aaKnown RBP20.79■□□□□ 0.92
MBD4-204ENST00000503197 CGNL1Q0VF96 1302 aa20.78■□□□□ 0.92
MBD4-204ENST00000503197 USP6P35125 1406 aa20.78■□□□□ 0.92
MBD4-204ENST00000503197 NGDNQ8NEJ9 315 aaKnown RBP20.77■□□□□ 0.92
MBD4-204ENST00000503197 SSH2Q76I76 1423 aa20.77■□□□□ 0.92
MBD4-204ENST00000503197 KIF20BQ96Q89 1820 aa20.75■□□□□ 0.91
MBD4-204ENST00000503197 RALBP1Q15311 655 aa20.75■□□□□ 0.91
MBD4-204ENST00000503197 KIF1AQ12756 1690 aa20.75■□□□□ 0.91
MBD4-204ENST00000503197 FYB1O15117 783 aa20.74■□□□□ 0.91
MBD4-204ENST00000503197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.74■□□□□ 0.91
MBD4-204ENST00000503197 NSD2O96028 1365 aa20.73■□□□□ 0.91
MBD4-204ENST00000503197 TTC21BQ7Z4L5 1316 aa20.72■□□□□ 0.91
MBD4-204ENST00000503197 ANKRD26Q9UPS8 1709 aa20.72■□□□□ 0.91
MBD4-204ENST00000503197 SLAIN2Q9P270 581 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms