RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 NUTM2FA1L443 756 aa17.42■□□□□ 0.38
SYNE4-206ENST00000503121 SAFB2Q14151 953 aaKnown RBP eCLIP17.42■□□□□ 0.38
SYNE4-206ENST00000503121 PRAM1Q96QH2 718 aa17.42■□□□□ 0.38
SYNE4-206ENST00000503121 POGKQ9P215 609 aa17.42■□□□□ 0.38
SYNE4-206ENST00000503121 TRAK1Q9UPV9 953 aa17.42■□□□□ 0.38
SYNE4-206ENST00000503121 AHDC1Q5TGY3 1603 aaPredicted RBP17.42■□□□□ 0.38
SYNE4-206ENST00000503121 COL16A1Q07092 1604 aaPredicted RBP17.41■□□□□ 0.38
SYNE4-206ENST00000503121 ESCO1Q5FWF5 840 aa17.41■□□□□ 0.38
SYNE4-206ENST00000503121 LRRC59Q96AG4 307 aaKnown RBP17.4■□□□□ 0.38
SYNE4-206ENST00000503121 KNDC1Q76NI1 1749 aa17.4■□□□□ 0.38
SYNE4-206ENST00000503121 NEUROD1Q13562 356 aa17.39■□□□□ 0.37
SYNE4-206ENST00000503121 SIN3AQ96ST3 1273 aa17.39■□□□□ 0.37
SYNE4-206ENST00000503121 SPATA31A6Q5VVP1 1343 aa17.38■□□□□ 0.37
SYNE4-206ENST00000503121 CDC42BPGQ6DT37 1551 aa17.37■□□□□ 0.37
SYNE4-206ENST00000503121 ADGRB1O14514 1584 aa17.36■□□□□ 0.37
SYNE4-206ENST00000503121 NUTM2BA6NNL0 878 aaPredicted RBP17.36■□□□□ 0.37
SYNE4-206ENST00000503121 NUTM2EB1AL46 878 aaPredicted RBP17.36■□□□□ 0.37
SYNE4-206ENST00000503121 MEX3CQ5U5Q3 659 aaKnown RBP17.36■□□□□ 0.37
SYNE4-206ENST00000503121 NUTM2AQ8IVF1 878 aaPredicted RBP17.36■□□□□ 0.37
SYNE4-206ENST00000503121 L3MBTL2Q969R5 705 aa17.35■□□□□ 0.37
SYNE4-206ENST00000503121 FOXO3O43524 673 aa17.34■□□□□ 0.37
SYNE4-206ENST00000503121 NHSL1Q5SYE7 1610 aa17.34■□□□□ 0.37
SYNE4-206ENST00000503121 DLC1Q96QB1 1528 aa17.34■□□□□ 0.37
SYNE4-206ENST00000503121 RGS17Q9UGC6 210 aaPredicted RBP17.34■□□□□ 0.37
SYNE4-206ENST00000503121 NPHP3Q7Z494 1330 aa17.33■□□□□ 0.36
SYNE4-206ENST00000503121 MINK1Q8N4C8 1332 aaPredicted RBP17.33■□□□□ 0.36
SYNE4-206ENST00000503121 HIRIP3Q9BW71 556 aaPredicted RBP17.33■□□□□ 0.36
SYNE4-206ENST00000503121 SOS2Q07890 1332 aaPredicted RBP17.32■□□□□ 0.36
SYNE4-206ENST00000503121 SOCS7O14512 581 aa17.31■□□□□ 0.36
SYNE4-206ENST00000503121 XPCQ01831 940 aaPredicted RBP17.31■□□□□ 0.36
SYNE4-206ENST00000503121 NBPF1Q3BBV0 1214 aa17.31■□□□□ 0.36
SYNE4-206ENST00000503121 SHPRHQ149N8 1683 aa17.3■□□□□ 0.36
SYNE4-206ENST00000503121 PNPLA6Q8IY17 1366 aa17.29■□□□□ 0.36
SYNE4-206ENST00000503121 PHF8Q9UPP1 1060 aa17.29■□□□□ 0.36
SYNE4-206ENST00000503121 LRP6O75581 1613 aa17.29■□□□□ 0.36
SYNE4-206ENST00000503121 FMN2Q9NZ56 1722 aa17.28■□□□□ 0.36
SYNE4-206ENST00000503121 POTEAQ6S8J7 498 aa17.27■□□□□ 0.36
SYNE4-206ENST00000503121 WASLO00401 505 aaPredicted RBP17.26■□□□□ 0.35
SYNE4-206ENST00000503121 ADAMTS2O95450 1211 aa17.25■□□□□ 0.35
SYNE4-206ENST00000503121 KRT28Q7Z3Y7 464 aa17.25■□□□□ 0.35
SYNE4-206ENST00000503121 PMFBP1Q8TBY8 1022 aa17.25■□□□□ 0.35
SYNE4-206ENST00000503121 KIAA1210Q9ULL0 1709 aa17.24■□□□□ 0.35
SYNE4-206ENST00000503121 PSME1Q06323 249 aa17.24■□□□□ 0.35
SYNE4-206ENST00000503121 ZNF772Q68DY9 489 aaPredicted RBP17.24■□□□□ 0.35
SYNE4-206ENST00000503121 EIF3AQ14152 1382 aaKnown RBP17.24■□□□□ 0.35
SYNE4-206ENST00000503121 PXDNQ92626 1479 aa17.24■□□□□ 0.35
SYNE4-206ENST00000503121 ANKARQ7Z5J8 1434 aa17.23■□□□□ 0.35
SYNE4-206ENST00000503121 C8orf37Q96NL8 207 aa17.23■□□□□ 0.35
SYNE4-206ENST00000503121 ADGRB2O60241 1585 aa17.22■□□□□ 0.35
SYNE4-206ENST00000503121 RGPD8O14715 1765 aaPredicted RBP17.21■□□□□ 0.35
SYNE4-206ENST00000503121 KIF1AQ12756 1690 aa17.21■□□□□ 0.35
SYNE4-206ENST00000503121 TONSLQ96HA7 1378 aa17.21■□□□□ 0.35
SYNE4-206ENST00000503121 NGLY1Q96IV0 654 aa17.21■□□□□ 0.35
SYNE4-206ENST00000503121 CDK19Q9BWU1 502 aa17.21■□□□□ 0.35
SYNE4-206ENST00000503121 ARHGEF28Q8N1W1 1705 aaKnown RBP17.21■□□□□ 0.35
SYNE4-206ENST00000503121 AFF2P51816 1311 aa17.21■□□□□ 0.34
SYNE4-206ENST00000503121 SPATA31A3Q5VYP0 1347 aa17.21■□□□□ 0.34
SYNE4-206ENST00000503121 LMOD2Q6P5Q4 547 aa17.2■□□□□ 0.34
SYNE4-206ENST00000503121 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
SYNE4-206ENST00000503121 CENPJQ9HC77 1338 aaPredicted RBP17.2■□□□□ 0.34
SYNE4-206ENST00000503121 ROCK2O75116 1388 aaKnown RBP17.19■□□□□ 0.34
SYNE4-206ENST00000503121 NGDNQ8NEJ9 315 aaKnown RBP17.19■□□□□ 0.34
SYNE4-206ENST00000503121 NUDT16Q96DE0 195 aaKnown RBP17.19■□□□□ 0.34
SYNE4-206ENST00000503121 TULP4Q9NRJ4 1543 aa17.18■□□□□ 0.34
SYNE4-206ENST00000503121 PCGF6Q9BYE7 350 aa17.18■□□□□ 0.34
SYNE4-206ENST00000503121 GPRASP1Q5JY77 1395 aa17.17■□□□□ 0.34
SYNE4-206ENST00000503121 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
SYNE4-206ENST00000503121 NBPF8Q3BBV2 869 aa17.17■□□□□ 0.34
SYNE4-206ENST00000503121 USP32Q8NFA0 1604 aa17.17■□□□□ 0.34
SYNE4-206ENST00000503121 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
SYNE4-206ENST00000503121 SRPK2P78362 688 aaKnown RBP17.16■□□□□ 0.34
SYNE4-206ENST00000503121 RXRBP28702 533 aa17.15■□□□□ 0.34
SYNE4-206ENST00000503121 SBNO1A3KN83 1393 aa17.15■□□□□ 0.34
SYNE4-206ENST00000503121 TNS3Q68CZ2 1445 aa17.14■□□□□ 0.33
SYNE4-206ENST00000503121 QTRT2Q9H974 415 aaKnown RBP17.14■□□□□ 0.33
SYNE4-206ENST00000503121 CCDC61Q9Y6R9 512 aa17.14■□□□□ 0.33
SYNE4-206ENST00000503121 TRPM1Q7Z4N2 1603 aa17.14■□□□□ 0.33
SYNE4-206ENST00000503121 COL22A1Q8NFW1 1626 aaPredicted RBP17.14■□□□□ 0.33
SYNE4-206ENST00000503121 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
SYNE4-206ENST00000503121 CABLES1Q8TDN4 633 aa17.13■□□□□ 0.33
SYNE4-206ENST00000503121 CABP2Q9NPB3 220 aa17.13■□□□□ 0.33
SYNE4-206ENST00000503121 USP21Q9UK80 565 aa17.13■□□□□ 0.33
SYNE4-206ENST00000503121 ARHGEF10O15013 1369 aa17.13■□□□□ 0.33
SYNE4-206ENST00000503121 CARD11Q9BXL7 1154 aa17.12■□□□□ 0.33
SYNE4-206ENST00000503121 ATP7BP35670 1465 aa17.12■□□□□ 0.33
SYNE4-206ENST00000503121 FNBP4Q8N3X1 1017 aaPredicted RBP17.1■□□□□ 0.33
SYNE4-206ENST00000503121 PLEKHG3A1L390 1219 aa17.09■□□□□ 0.33
SYNE4-206ENST00000503121 ACEP12821 1306 aa17.09■□□□□ 0.33
SYNE4-206ENST00000503121 EVC2Q86UK5 1308 aa17.09■□□□□ 0.33
SYNE4-206ENST00000503121 RBM6P78332 1123 aaKnown RBP17.08■□□□□ 0.32
SYNE4-206ENST00000503121 TRPC5Q9UL62 973 aaPredicted RBP17.08■□□□□ 0.32
SYNE4-206ENST00000503121 QRICH2Q9H0J4 1663 aa17.07■□□□□ 0.32
SYNE4-206ENST00000503121 ITSN1Q15811 1721 aa17.07■□□□□ 0.32
SYNE4-206ENST00000503121 PPIP5K1Q6PFW1 1433 aa17.05■□□□□ 0.32
SYNE4-206ENST00000503121 POLR3AO14802 1390 aaPredicted RBP17.05■□□□□ 0.32
SYNE4-206ENST00000503121 CABP1Q9NZU7 370 aa17.05■□□□□ 0.32
SYNE4-206ENST00000503121 RALGAPBQ86X10 1494 aa17.05■□□□□ 0.32
SYNE4-206ENST00000503121 TRPM3Q9HCF6 1732 aaPredicted RBP17.03■□□□□ 0.32
SYNE4-206ENST00000503121 BCL9LQ86UU0 1499 aa17.02■□□□□ 0.32
SYNE4-206ENST00000503121 NUTM2GQ5VZR2 741 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms