RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 PRAM1Q96QH2 718 aa10.48□□□□□ -0.73
USP46-203ENST00000502443 POGKQ9P215 609 aa10.48□□□□□ -0.73
USP46-203ENST00000502443 CCER1Q8TC90 406 aaPredicted RBP10.47□□□□□ -0.73
USP46-203ENST00000502443 DLC1Q96QB1 1528 aa10.47□□□□□ -0.73
USP46-203ENST00000502443 MST1RQ04912 1400 aa10.46□□□□□ -0.74
USP46-203ENST00000502443 CLSPNQ9HAW4 1339 aa10.45□□□□□ -0.74
USP46-203ENST00000502443 NUTM2FA1L443 756 aa10.44□□□□□ -0.74
USP46-203ENST00000502443 NBPF8Q3BBV2 869 aa10.44□□□□□ -0.74
USP46-203ENST00000502443 BRINP3Q76B58 766 aa10.44□□□□□ -0.74
USP46-203ENST00000502443 ARHGEF28Q8N1W1 1705 aaKnown RBP10.44□□□□□ -0.74
USP46-203ENST00000502443 TRPM1Q7Z4N2 1603 aa10.44□□□□□ -0.74
USP46-203ENST00000502443 CDC42BPGQ6DT37 1551 aa10.43□□□□□ -0.74
USP46-203ENST00000502443 C1orf167Q5SNV9 1468 aa10.43□□□□□ -0.74
USP46-203ENST00000502443 ROCK2O75116 1388 aaKnown RBP10.43□□□□□ -0.74
USP46-203ENST00000502443 MINK1Q8N4C8 1332 aaPredicted RBP10.43□□□□□ -0.74
USP46-203ENST00000502443 HIRIP3Q9BW71 556 aaPredicted RBP10.43□□□□□ -0.74
USP46-203ENST00000502443 PHLPP1O60346 1717 aa10.42□□□□□ -0.74
USP46-203ENST00000502443 ORAI2Q96SN7 254 aa10.42□□□□□ -0.74
USP46-203ENST00000502443 ESCO1Q5FWF5 840 aa10.41□□□□□ -0.74
USP46-203ENST00000502443 FMN2Q9NZ56 1722 aa10.41□□□□□ -0.74
USP46-203ENST00000502443 DDX17Q92841 729 aaKnown RBP10.4□□□□□ -0.74
USP46-203ENST00000502443 RGPD8O14715 1765 aaPredicted RBP10.39□□□□□ -0.75
USP46-203ENST00000502443 WASLO00401 505 aaPredicted RBP10.39□□□□□ -0.75
USP46-203ENST00000502443 CARD11Q9BXL7 1154 aa10.39□□□□□ -0.75
USP46-203ENST00000502443 TIMELESSQ9UNS1 1208 aa10.39□□□□□ -0.75
USP46-203ENST00000502443 AHDC1Q5TGY3 1603 aaPredicted RBP10.39□□□□□ -0.75
USP46-203ENST00000502443 ADGRB2O60241 1585 aa10.39□□□□□ -0.75
USP46-203ENST00000502443 CENPJQ9HC77 1338 aaPredicted RBP10.38□□□□□ -0.75
USP46-203ENST00000502443 RALGAPBQ86X10 1494 aa10.38□□□□□ -0.75
USP46-203ENST00000502443 COL16A1Q07092 1604 aaPredicted RBP10.38□□□□□ -0.75
USP46-203ENST00000502443 NHSL1Q5SYE7 1610 aa10.38□□□□□ -0.75
USP46-203ENST00000502443 GPRASP1Q5JY77 1395 aa10.38□□□□□ -0.75
USP46-203ENST00000502443 FOXO3O43524 673 aa10.37□□□□□ -0.75
USP46-203ENST00000502443 CDK19Q9BWU1 502 aa10.37□□□□□ -0.75
USP46-203ENST00000502443 QRICH2Q9H0J4 1663 aa10.37□□□□□ -0.75
USP46-203ENST00000502443 EIF3AQ14152 1382 aaKnown RBP10.37□□□□□ -0.75
USP46-203ENST00000502443 LRRC59Q96AG4 307 aaKnown RBP10.36□□□□□ -0.75
USP46-203ENST00000502443 PHF8Q9UPP1 1060 aa10.36□□□□□ -0.75
USP46-203ENST00000502443 JCADQ9P266 1359 aa10.36□□□□□ -0.75
USP46-203ENST00000502443 NPHP3Q7Z494 1330 aa10.35□□□□□ -0.75
USP46-203ENST00000502443 ANKARQ7Z5J8 1434 aa10.35□□□□□ -0.75
USP46-203ENST00000502443 TULP4Q9NRJ4 1543 aa10.35□□□□□ -0.75
USP46-203ENST00000502443 XPCQ01831 940 aaPredicted RBP10.35□□□□□ -0.75
USP46-203ENST00000502443 PMFBP1Q8TBY8 1022 aa10.35□□□□□ -0.75
USP46-203ENST00000502443 USP32Q8NFA0 1604 aa10.35□□□□□ -0.75
USP46-203ENST00000502443 KIF1AQ12756 1690 aa10.34□□□□□ -0.75
USP46-203ENST00000502443 SOS2Q07890 1332 aaPredicted RBP10.34□□□□□ -0.75
USP46-203ENST00000502443 PRR36Q9H6K5 1346 aa10.34□□□□□ -0.75
USP46-203ENST00000502443 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
USP46-203ENST00000502443 NUDT16Q96DE0 195 aaKnown RBP10.34□□□□□ -0.75
USP46-203ENST00000502443 PSME1Q06323 249 aa10.33□□□□□ -0.76
USP46-203ENST00000502443 PHF23Q9BUL5 403 aaPredicted RBP10.33□□□□□ -0.76
USP46-203ENST00000502443 CABP2Q9NPB3 220 aa10.33□□□□□ -0.76
USP46-203ENST00000502443 DISP3Q9P2K9 1392 aa10.33□□□□□ -0.76
USP46-203ENST00000502443 EVC2Q86UK5 1308 aa10.33□□□□□ -0.76
USP46-203ENST00000502443 SHPRHQ149N8 1683 aa10.32□□□□□ -0.76
USP46-203ENST00000502443 MED1Q15648 1581 aaPredicted RBP10.32□□□□□ -0.76
USP46-203ENST00000502443 ATP7BP35670 1465 aa10.32□□□□□ -0.76
USP46-203ENST00000502443 PXDNQ92626 1479 aa10.32□□□□□ -0.76
USP46-203ENST00000502443 KRT28Q7Z3Y7 464 aa10.32□□□□□ -0.76
USP46-203ENST00000502443 CCDC61Q9Y6R9 512 aa10.32□□□□□ -0.76
USP46-203ENST00000502443 ITSN1Q15811 1721 aa10.32□□□□□ -0.76
USP46-203ENST00000502443 SPATA31A6Q5VVP1 1343 aa10.32□□□□□ -0.76
USP46-203ENST00000502443 NUTM2BA6NNL0 878 aaPredicted RBP10.31□□□□□ -0.76
USP46-203ENST00000502443 NUTM2EB1AL46 878 aaPredicted RBP10.31□□□□□ -0.76
USP46-203ENST00000502443 NUTM2AQ8IVF1 878 aaPredicted RBP10.31□□□□□ -0.76
USP46-203ENST00000502443 NGDNQ8NEJ9 315 aaKnown RBP10.31□□□□□ -0.76
USP46-203ENST00000502443 PNPLA6Q8IY17 1366 aa10.3□□□□□ -0.76
USP46-203ENST00000502443 ST20-MTHFSA0A0A6YYL1 179 aa10.3□□□□□ -0.76
USP46-203ENST00000502443 SBNO2Q9Y2G9 1366 aa10.29□□□□□ -0.76
USP46-203ENST00000502443 MEX3CQ5U5Q3 659 aaKnown RBP10.29□□□□□ -0.76
USP46-203ENST00000502443 LMOD2Q6P5Q4 547 aa10.29□□□□□ -0.76
USP46-203ENST00000502443 SPATA31A3Q5VYP0 1347 aa10.29□□□□□ -0.76
USP46-203ENST00000502443 TOPAZ1Q8N9V7 1692 aa10.28□□□□□ -0.76
USP46-203ENST00000502443 USP47Q96K76 1375 aa10.28□□□□□ -0.76
USP46-203ENST00000502443 PPIP5K1Q6PFW1 1433 aa10.28□□□□□ -0.76
USP46-203ENST00000502443 PLEKHG3A1L390 1219 aa10.28□□□□□ -0.76
USP46-203ENST00000502443 ACEP12821 1306 aa10.28□□□□□ -0.76
USP46-203ENST00000502443 SBNO1A3KN83 1393 aa10.27□□□□□ -0.76
USP46-203ENST00000502443 LRP6O75581 1613 aa10.27□□□□□ -0.77
USP46-203ENST00000502443 SLC24A1O60721 1099 aa10.27□□□□□ -0.77
USP46-203ENST00000502443 PAK3O75914 559 aaPredicted RBP10.27□□□□□ -0.77
USP46-203ENST00000502443 PLEKHG5O94827 1062 aa10.27□□□□□ -0.77
USP46-203ENST00000502443 CABP1Q9NZU7 370 aa10.27□□□□□ -0.77
USP46-203ENST00000502443 POLR3AO14802 1390 aaPredicted RBP10.26□□□□□ -0.77
USP46-203ENST00000502443 TNS3Q68CZ2 1445 aa10.26□□□□□ -0.77
USP46-203ENST00000502443 ADAMTS2O95450 1211 aa10.26□□□□□ -0.77
USP46-203ENST00000502443 TESK2Q96S53 571 aa10.26□□□□□ -0.77
USP46-203ENST00000502443 ATAD2Q6PL18 1390 aa10.26□□□□□ -0.77
USP46-203ENST00000502443 COL22A1Q8NFW1 1626 aaPredicted RBP10.25□□□□□ -0.77
USP46-203ENST00000502443 TRPM3Q9HCF6 1732 aaPredicted RBP10.25□□□□□ -0.77
USP46-203ENST00000502443 ARHGEF10O15013 1369 aa10.25□□□□□ -0.77
USP46-203ENST00000502443 HAP1P54257 671 aaPredicted RBP10.24□□□□□ -0.77
USP46-203ENST00000502443 TMC1Q8TDI8 760 aa10.24□□□□□ -0.77
USP46-203ENST00000502443 C8orf37Q96NL8 207 aa10.24□□□□□ -0.77
USP46-203ENST00000502443 ALS2Q96Q42 1657 aa10.23□□□□□ -0.77
USP46-203ENST00000502443 TMF1P82094 1093 aa10.23□□□□□ -0.77
USP46-203ENST00000502443 CABLES1Q8TDN4 633 aa10.23□□□□□ -0.77
USP46-203ENST00000502443 RGS17Q9UGC6 210 aaPredicted RBP10.23□□□□□ -0.77
USP46-203ENST00000502443 EIF4G2P78344 907 aaKnown RBP eCLIP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms