RNA–Protein interactions for RNA: ENST00000498666.5

ITGB2-212, Transcript of integrin subunit beta 2, humanhuman

TSL 1 (best)

Gene ITGB2, Length 4,781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-212ENST00000498666 CT47B1P0C2W7 299 aaPredicted RBP16.53■□□□□ 0.24
ITGB2-212ENST00000498666 CPLX2Q6PUV4 134 aaKnown RBP16.53■□□□□ 0.24
ITGB2-212ENST00000498666 KIAA0586Q9BVV6 1533 aa16.53■□□□□ 0.24
ITGB2-212ENST00000498666 HSP90AB4PQ58FF6 505 aa16.53■□□□□ 0.24
ITGB2-212ENST00000498666 FAM43AQ8N2R8 423 aa16.53■□□□□ 0.24
ITGB2-212ENST00000498666 MRC2Q9UBG0 1479 aa16.52■□□□□ 0.24
ITGB2-212ENST00000498666 ZNF330Q9Y3S2 320 aaPredicted RBP16.52■□□□□ 0.24
ITGB2-212ENST00000498666 DDX58O95786 925 aaKnown RBP16.52■□□□□ 0.24
ITGB2-212ENST00000498666 ANO2Q9NQ90 1003 aa16.52■□□□□ 0.24
ITGB2-212ENST00000498666 CUL7Q14999 1698 aa16.52■□□□□ 0.23
ITGB2-212ENST00000498666 DIAPH3Q9NSV4 1193 aa16.51■□□□□ 0.23
ITGB2-212ENST00000498666 MCTP1Q6DN14 999 aa16.51■□□□□ 0.23
ITGB2-212ENST00000498666 TULP1O00294 542 aaPredicted RBP16.5■□□□□ 0.23
ITGB2-212ENST00000498666 FKBP5Q13451 457 aaPredicted RBP16.5■□□□□ 0.23
ITGB2-212ENST00000498666 TSR2Q969E8 191 aaKnown RBP16.5■□□□□ 0.23
ITGB2-212ENST00000498666 CC2D2AQ9P2K1 1620 aa16.49■□□□□ 0.23
ITGB2-212ENST00000498666 MVPQ14764 893 aaKnown RBP16.49■□□□□ 0.23
ITGB2-212ENST00000498666 GCC1Q96CN9 775 aa16.49■□□□□ 0.23
ITGB2-212ENST00000498666 IQGAP2Q13576 1575 aa16.49■□□□□ 0.23
ITGB2-212ENST00000498666 NOB1Q9ULX3 412 aaKnown RBP16.49■□□□□ 0.23
ITGB2-212ENST00000498666 ZKSCAN1P17029 563 aaPredicted RBP16.48■□□□□ 0.23
ITGB2-212ENST00000498666 GTF2E1P29083 439 aaPredicted RBP16.48■□□□□ 0.23
ITGB2-212ENST00000498666 PRKAR2BP31323 418 aa16.48■□□□□ 0.23
ITGB2-212ENST00000498666 CAMSAP2Q08AD1 1489 aa16.48■□□□□ 0.23
ITGB2-212ENST00000498666 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.47■□□□□ 0.23
ITGB2-212ENST00000498666 TTC5Q8N0Z6 440 aa16.47■□□□□ 0.23
ITGB2-212ENST00000498666 SNAPC4Q5SXM2 1469 aa16.47■□□□□ 0.23
ITGB2-212ENST00000498666 NASPP49321 788 aaPredicted RBP16.47■□□□□ 0.23
ITGB2-212ENST00000498666 ATF7IPQ6VMQ6 1270 aa16.47■□□□□ 0.23
ITGB2-212ENST00000498666 C20orf194Q5TEA3 1177 aa16.47■□□□□ 0.23
ITGB2-212ENST00000498666 H3BQV1 296 aa16.46■□□□□ 0.23
ITGB2-212ENST00000498666 SF3A1Q15459 793 aaKnown RBP16.46■□□□□ 0.23
ITGB2-212ENST00000498666 IFFO2Q5TF58 517 aa16.46■□□□□ 0.23
ITGB2-212ENST00000498666 TSPYL4Q9UJ04 414 aa16.46■□□□□ 0.23
ITGB2-212ENST00000498666 CCDC9Q9Y3X0 531 aaKnown RBP16.46■□□□□ 0.23
ITGB2-212ENST00000498666 VSIG10Q8N0Z9 540 aa16.46■□□□□ 0.22
ITGB2-212ENST00000498666 EIF2S2P20042 333 aaKnown RBP16.45■□□□□ 0.22
ITGB2-212ENST00000498666 RNF20Q5VTR2 975 aa16.45■□□□□ 0.22
ITGB2-212ENST00000498666 FAM184AQ8NB25 1140 aa16.45■□□□□ 0.22
ITGB2-212ENST00000498666 NECTIN2Q92692 538 aa16.45■□□□□ 0.22
ITGB2-212ENST00000498666 C9orf78Q9NZ63 289 aaPredicted RBP16.45■□□□□ 0.22
ITGB2-212ENST00000498666 PTPRKQ15262 1439 aa16.45■□□□□ 0.22
ITGB2-212ENST00000498666 G3V3G9 751 aa16.45■□□□□ 0.22
ITGB2-212ENST00000498666 RABEP1Q15276 862 aa16.45■□□□□ 0.22
ITGB2-212ENST00000498666 DCAF8Q5TAQ9 597 aa16.45■□□□□ 0.22
ITGB2-212ENST00000498666 SYNE3Q6ZMZ3 975 aa16.44■□□□□ 0.22
ITGB2-212ENST00000498666 TWISTNBQ3B726 338 aaPredicted RBP16.44■□□□□ 0.22
ITGB2-212ENST00000498666 GOLGA6L19H0YKK7 550 aa16.43■□□□□ 0.22
ITGB2-212ENST00000498666 RASSF8Q8NHQ8 419 aa16.43■□□□□ 0.22
ITGB2-212ENST00000498666 IFIT2P09913 472 aaKnown RBP16.43■□□□□ 0.22
ITGB2-212ENST00000498666 TPM3P06753 285 aa16.42■□□□□ 0.22
ITGB2-212ENST00000498666 CLSTN1O94985 981 aa16.42■□□□□ 0.22
ITGB2-212ENST00000498666 AKAP17AQ02040 695 aaKnown RBP16.42■□□□□ 0.22
ITGB2-212ENST00000498666 SKAP1Q86WV1 359 aa16.42■□□□□ 0.22
ITGB2-212ENST00000498666 SMC3Q9UQE7 1217 aa16.42■□□□□ 0.22
ITGB2-212ENST00000498666 CCDC141Q6ZP82 1450 aa16.42■□□□□ 0.22
ITGB2-212ENST00000498666 AMOTL1Q8IY63 956 aa16.42■□□□□ 0.22
ITGB2-212ENST00000498666 BECN2A8MW95 431 aa16.42■□□□□ 0.22
ITGB2-212ENST00000498666 MCM4P33991 863 aa16.41■□□□□ 0.22
ITGB2-212ENST00000498666 C1orf115Q9H7X2 142 aa16.41■□□□□ 0.22
ITGB2-212ENST00000498666 MAGI1Q96QZ7 1491 aaPredicted RBP16.41■□□□□ 0.22
ITGB2-212ENST00000498666 ANO8Q9HCE9 1232 aaPredicted RBP16.41■□□□□ 0.22
ITGB2-212ENST00000498666 FAM13BQ9NYF5 915 aa16.41■□□□□ 0.22
ITGB2-212ENST00000498666 PRAM1Q96QH2 718 aa16.4■□□□□ 0.22
ITGB2-212ENST00000498666 ARHGEF11O15085 1522 aa16.4■□□□□ 0.22
ITGB2-212ENST00000498666 DUSP27Q5VZP5 1158 aa16.4■□□□□ 0.22
ITGB2-212ENST00000498666 CAVIN1Q6NZI2 390 aaKnown RBP16.4■□□□□ 0.22
ITGB2-212ENST00000498666 ERC2O15083 957 aa16.39■□□□□ 0.22
ITGB2-212ENST00000498666 CHD1LQ86WJ1 897 aa16.39■□□□□ 0.22
ITGB2-212ENST00000498666 MBD3O95983 291 aa16.39■□□□□ 0.21
ITGB2-212ENST00000498666 MCM2P49736 904 aa16.39■□□□□ 0.21
ITGB2-212ENST00000498666 GNAI3P08754 354 aa16.39■□□□□ 0.21
ITGB2-212ENST00000498666 NKTRP30414 1462 aaKnown RBP16.39■□□□□ 0.21
ITGB2-212ENST00000498666 EVA1CP58658 441 aa16.38■□□□□ 0.21
ITGB2-212ENST00000498666 ZNF428Q96B54 188 aa16.38■□□□□ 0.21
ITGB2-212ENST00000498666 NOL10Q9BSC4 688 aaKnown RBP16.38■□□□□ 0.21
ITGB2-212ENST00000498666 CIZ1Q9ULV3 898 aaPredicted RBP16.38■□□□□ 0.21
ITGB2-212ENST00000498666 VPS37CA5D8V6 355 aaPredicted RBP16.38■□□□□ 0.21
ITGB2-212ENST00000498666 TPM1P09493 284 aa16.38■□□□□ 0.21
ITGB2-212ENST00000498666 NEK4P51957 841 aa16.38■□□□□ 0.21
ITGB2-212ENST00000498666 RARSP54136 660 aaKnown RBP16.38■□□□□ 0.21
ITGB2-212ENST00000498666 TOMM22Q9NS69 142 aa16.38■□□□□ 0.21
ITGB2-212ENST00000498666 K7ELQ4 463 aaPredicted RBP16.38■□□□□ 0.21
ITGB2-212ENST00000498666 GOLGA6L1Q8N7Z2 621 aa16.38■□□□□ 0.21
ITGB2-212ENST00000498666 UBTFL1P0CB47 393 aaPredicted RBP16.37■□□□□ 0.21
ITGB2-212ENST00000498666 TSR1Q2NL82 804 aaKnown RBP16.37■□□□□ 0.21
ITGB2-212ENST00000498666 RPGRIP1LQ68CZ1 1315 aa16.37■□□□□ 0.21
ITGB2-212ENST00000498666 PLB1Q6P1J6 1458 aa16.37■□□□□ 0.21
ITGB2-212ENST00000498666 PSME1Q06323 249 aa16.37■□□□□ 0.21
ITGB2-212ENST00000498666 G3BP1Q13283 466 aaKnown RBP eCLIP16.37■□□□□ 0.21
ITGB2-212ENST00000498666 CYB5RLQ6IPT4 315 aa16.37■□□□□ 0.21
ITGB2-212ENST00000498666 TPM2P07951 284 aa16.37■□□□□ 0.21
ITGB2-212ENST00000498666 CCDC39Q9UFE4 941 aa16.37■□□□□ 0.21
ITGB2-212ENST00000498666 NSD3Q9BZ95 1437 aa16.37■□□□□ 0.21
ITGB2-212ENST00000498666 CCDC173Q0VFZ6 552 aa16.36■□□□□ 0.21
ITGB2-212ENST00000498666 CCDC47Q96A33 483 aaKnown RBP16.36■□□□□ 0.21
ITGB2-212ENST00000498666 CWC22Q9HCG8 908 aaKnown RBP16.36■□□□□ 0.21
ITGB2-212ENST00000498666 HOOK1Q9UJC3 728 aaKnown RBP16.36■□□□□ 0.21
ITGB2-212ENST00000498666 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
ITGB2-212ENST00000498666 PRPF40AO75400 957 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms