RNA–Protein interactions for RNA: ENST00000498623.6

ARPC4-208, Transcript of actin related protein 2/3 complex subunit 4, human

TSL 2 BASIC

Gene ARPC4, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARPC4-208	ENST00000498623	LRP6	O75581	1613 aa		33.52	■■■□□ 2.96
ARPC4-208	ENST00000498623	STAC3	Q96MF2	364 aa		33.51	■■■□□ 2.95
ARPC4-208	ENST00000498623	DHX57	Q6P158	1386 aa	Known RBP	33.5	■■■□□ 2.95
ARPC4-208	ENST00000498623	WAPL	Q7Z5K2	1190 aa		33.5	■■■□□ 2.95
ARPC4-208	ENST00000498623	PLEKHH1	Q9ULM0	1364 aa		33.49	■■■□□ 2.95
ARPC4-208	ENST00000498623	ADGRB1	O14514	1584 aa		33.49	■■■□□ 2.95
ARPC4-208	ENST00000498623	DLC1	Q96QB1	1528 aa		33.48	■■■□□ 2.95
ARPC4-208	ENST00000498623	FMN2	Q9NZ56	1722 aa		33.48	■■■□□ 2.95
ARPC4-208	ENST00000498623	LRRC59	Q96AG4	307 aa	Known RBP	33.46	■■■□□ 2.95
ARPC4-208	ENST00000498623	ORAI2	Q96SN7	254 aa		33.45	■■■□□ 2.95
ARPC4-208	ENST00000498623	DCAF11	Q8TEB1	546 aa		33.43	■■■□□ 2.94
ARPC4-208	ENST00000498623	DDX17	Q92841	729 aa	Known RBP	33.43	■■■□□ 2.94
ARPC4-208	ENST00000498623	SOS2	Q07890	1332 aa	Predicted RBP	33.42	■■■□□ 2.94
ARPC4-208	ENST00000498623	PNPLA6	Q8IY17	1366 aa		33.4	■■■□□ 2.94
ARPC4-208	ENST00000498623	KDM2A	Q9Y2K7	1162 aa		33.38	■■■□□ 2.93
ARPC4-208	ENST00000498623	KIF1A	Q12756	1690 aa		33.36	■■■□□ 2.93
ARPC4-208	ENST00000498623	POTEA	Q6S8J7	498 aa		33.36	■■■□□ 2.93
ARPC4-208	ENST00000498623	ADGRB2	O60241	1585 aa		33.35	■■■□□ 2.93
ARPC4-208	ENST00000498623	ESCO1	Q5FWF5	840 aa		33.35	■■■□□ 2.93
ARPC4-208	ENST00000498623	NPHP3	Q7Z494	1330 aa		33.33	■■■□□ 2.93
ARPC4-208	ENST00000498623	MEX3C	Q5U5Q3	659 aa	Known RBP	33.33	■■■□□ 2.93
ARPC4-208	ENST00000498623	PRAM1	Q96QH2	718 aa		33.33	■■■□□ 2.93
ARPC4-208	ENST00000498623	KIAA1210	Q9ULL0	1709 aa		33.33	■■■□□ 2.93
ARPC4-208	ENST00000498623	PXDN	Q92626	1479 aa		33.32	■■■□□ 2.92
ARPC4-208	ENST00000498623	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.32	■■■□□ 2.92
ARPC4-208	ENST00000498623	RGPD8	O14715	1765 aa	Predicted RBP	33.31	■■■□□ 2.92
ARPC4-208	ENST00000498623	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.28	■■■□□ 2.92
ARPC4-208	ENST00000498623	NUTM2E	B1AL46	878 aa	Predicted RBP	33.28	■■■□□ 2.92
ARPC4-208	ENST00000498623	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.28	■■■□□ 2.92
ARPC4-208	ENST00000498623	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.28	■■■□□ 2.92
ARPC4-208	ENST00000498623	NUTM2F	A1L443	756 aa		33.26	■■■□□ 2.91
ARPC4-208	ENST00000498623	ZNF772	Q68DY9	489 aa	Predicted RBP	33.26	■■■□□ 2.91
ARPC4-208	ENST00000498623	POGK	Q9P215	609 aa		33.26	■■■□□ 2.91
ARPC4-208	ENST00000498623	TRAK1	Q9UPV9	953 aa		33.24	■■■□□ 2.91
ARPC4-208	ENST00000498623	ANKAR	Q7Z5J8	1434 aa		33.23	■■■□□ 2.91
ARPC4-208	ENST00000498623	FOXO3	O43524	673 aa		33.23	■■■□□ 2.91
ARPC4-208	ENST00000498623	USP32	Q8NFA0	1604 aa		33.23	■■■□□ 2.91
ARPC4-208	ENST00000498623	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.22	■■■□□ 2.91
ARPC4-208	ENST00000498623	AFF2	P51816	1311 aa		33.15	■■■□□ 2.9
ARPC4-208	ENST00000498623	EIF3A	Q14152	1382 aa	Known RBP	33.15	■■■□□ 2.9
ARPC4-208	ENST00000498623	MARF1	Q9Y4F3	1742 aa	Known RBP	33.15	■■■□□ 2.9
ARPC4-208	ENST00000498623	TULP4	Q9NRJ4	1543 aa		33.14	■■■□□ 2.9
ARPC4-208	ENST00000498623	XPC	Q01831	940 aa	Predicted RBP	33.14	■■■□□ 2.9
ARPC4-208	ENST00000498623	PHF8	Q9UPP1	1060 aa		33.14	■■■□□ 2.9
ARPC4-208	ENST00000498623	C8orf37	Q96NL8	207 aa		33.12	■■■□□ 2.89
ARPC4-208	ENST00000498623	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.1	■■■□□ 2.89
ARPC4-208	ENST00000498623	SPATA31A3	Q5VYP0	1347 aa		33.09	■■■□□ 2.89
ARPC4-208	ENST00000498623	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.09	■■■□□ 2.89
ARPC4-208	ENST00000498623	ADAMTS2	O95450	1211 aa		33.08	■■■□□ 2.89
ARPC4-208	ENST00000498623	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.07	■■■□□ 2.88
ARPC4-208	ENST00000498623	WASL	O00401	505 aa	Predicted RBP	33.07	■■■□□ 2.88
ARPC4-208	ENST00000498623	KRT28	Q7Z3Y7	464 aa		33.07	■■■□□ 2.88
ARPC4-208	ENST00000498623	ITSN1	Q15811	1721 aa		33.07	■■■□□ 2.88
ARPC4-208	ENST00000498623	TNS3	Q68CZ2	1445 aa		33.06	■■■□□ 2.88
ARPC4-208	ENST00000498623	L3MBTL2	Q969R5	705 aa		33.05	■■■□□ 2.88
ARPC4-208	ENST00000498623	SBNO1	A3KN83	1393 aa		33.05	■■■□□ 2.88
ARPC4-208	ENST00000498623	NGLY1	Q96IV0	654 aa		33.04	■■■□□ 2.88
ARPC4-208	ENST00000498623	PRR36	Q9H6K5	1346 aa		33.03	■■■□□ 2.88
ARPC4-208	ENST00000498623	RXRB	P28702	533 aa		33.03	■■■□□ 2.88
ARPC4-208	ENST00000498623	PSME1	Q06323	249 aa		33.03	■■■□□ 2.88
ARPC4-208	ENST00000498623	SIN3A	Q96ST3	1273 aa		33.03	■■■□□ 2.88
ARPC4-208	ENST00000498623	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.02	■■■□□ 2.88
ARPC4-208	ENST00000498623	NBPF1	Q3BBV0	1214 aa		33.02	■■■□□ 2.88
ARPC4-208	ENST00000498623	TRPM1	Q7Z4N2	1603 aa		33.01	■■■□□ 2.87
ARPC4-208	ENST00000498623	ATP7B	P35670	1465 aa		33	■■■□□ 2.87
ARPC4-208	ENST00000498623	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33	■■■□□ 2.87
ARPC4-208	ENST00000498623	ABCA3	Q99758	1704 aa		32.99	■■■□□ 2.87
ARPC4-208	ENST00000498623	PMFBP1	Q8TBY8	1022 aa		32.98	■■■□□ 2.87
ARPC4-208	ENST00000498623	TRIM26	Q12899	539 aa	Predicted RBP	32.97	■■■□□ 2.87
ARPC4-208	ENST00000498623	TOPAZ1	Q8N9V7	1692 aa		32.97	■■■□□ 2.87
ARPC4-208	ENST00000498623	ARHGEF10	O15013	1369 aa		32.96	■■■□□ 2.87
ARPC4-208	ENST00000498623	QTRT2	Q9H974	415 aa	Known RBP	32.96	■■■□□ 2.87
ARPC4-208	ENST00000498623	ALS2	Q96Q42	1657 aa		32.96	■■■□□ 2.87
ARPC4-208	ENST00000498623	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.94	■■■□□ 2.86
ARPC4-208	ENST00000498623	RBM6	P78332	1123 aa	Known RBP	32.94	■■■□□ 2.86
ARPC4-208	ENST00000498623	USP21	Q9UK80	565 aa		32.94	■■■□□ 2.86
ARPC4-208	ENST00000498623	GPRASP1	Q5JY77	1395 aa		32.93	■■■□□ 2.86
ARPC4-208	ENST00000498623	QRICH2	Q9H0J4	1663 aa		32.92	■■■□□ 2.86
ARPC4-208	ENST00000498623	NEUROD1	Q13562	356 aa		32.92	■■■□□ 2.86
ARPC4-208	ENST00000498623	ATRN	O75882	1429 aa		32.91	■■■□□ 2.86
ARPC4-208	ENST00000498623	BCL9L	Q86UU0	1499 aa		32.91	■■■□□ 2.86
ARPC4-208	ENST00000498623	NUDT16	Q96DE0	195 aa	Known RBP	32.9	■■■□□ 2.86
ARPC4-208	ENST00000498623	TRPC5	Q9UL62	973 aa	Predicted RBP	32.9	■■■□□ 2.86
ARPC4-208	ENST00000498623	RGS12	O14924	1447 aa		32.89	■■■□□ 2.86
ARPC4-208	ENST00000498623	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.89	■■■□□ 2.86
ARPC4-208	ENST00000498623	CDK19	Q9BWU1	502 aa		32.89	■■■□□ 2.86
ARPC4-208	ENST00000498623	SLIT2	O94813	1529 aa		32.87	■■■□□ 2.85
ARPC4-208	ENST00000498623	NGDN	Q8NEJ9	315 aa	Known RBP	32.85	■■■□□ 2.85
ARPC4-208	ENST00000498623	CRYBG1	Q9Y4K1	1723 aa		32.85	■■■□□ 2.85
ARPC4-208	ENST00000498623	NWD2	Q9ULI1	1742 aa		32.84	■■■□□ 2.85
ARPC4-208	ENST00000498623	PLCH1	Q4KWH8	1693 aa		32.83	■■■□□ 2.85
ARPC4-208	ENST00000498623	POLR3A	O14802	1390 aa	Predicted RBP	32.83	■■■□□ 2.85
ARPC4-208	ENST00000498623	LMOD2	Q6P5Q4	547 aa		32.82	■■■□□ 2.84
ARPC4-208	ENST00000498623	CCDC61	Q9Y6R9	512 aa		32.82	■■■□□ 2.84
ARPC4-208	ENST00000498623	CABLES1	Q8TDN4	633 aa		32.81	■■■□□ 2.84
ARPC4-208	ENST00000498623	ROCK2	O75116	1388 aa	Known RBP	32.81	■■■□□ 2.84
ARPC4-208	ENST00000498623	HAP1	P54257	671 aa	Predicted RBP	32.8	■■■□□ 2.84
ARPC4-208	ENST00000498623	PLEKHG3	A1L390	1219 aa		32.77	■■■□□ 2.84
ARPC4-208	ENST00000498623	UNC5CL	Q8IV45	518 aa		32.76	■■■□□ 2.83
ARPC4-208	ENST00000498623	NBPF8	Q3BBV2	869 aa		32.74	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms